Perforin-2 clockwise hand-over-hand pre-pore to pore transition mechanism

Perforin-2 (PFN2, MPEG1) is a pore-forming protein that acts as a first line of defense in the mammalian immune system, rapidly killing engulfed microbes within the phagolysosome in macrophages. PFN2 self-assembles into hexadecameric pre-pore rings that transition upon acidification into pores damaging target cell membranes. Here, using high-speed atomic force microscopy (HS-AFM) imaging and line-scanning and molecular dynamics simulation, we elucidate PFN2 pre-pore to pore transition pathways and dynamics. Upon acidification, the pre-pore rings (pre-pore-I) display frequent, 1.8 s(-1), ring-opening dynamics that eventually, 0.2 s(-1), initiate transition into an intermediate, short-lived, similar to 75 ms, pre-pore-II state, inducing a clockwise pre-pore-I to pre-pore-II propagation. Concomitantly, the first pre-pore-II subunit, undergoes a major conformational change to the pore state that propagates also clockwise at a rate similar to 15 s(-1). Thus, the pre-pore to pore transition is a clockwise hand-over-hand mechanism that is accomplished within similar to 1.3 s. Our findings suggest a clockwise mechanism of membrane insertion that with variations may be general for the MACPF/CDC superfamily.

Automated summary

In this study, the authors investigate the pathways and dynamics of the transition from pre-pore to pore state in PFN2. They find that this transition follows a clockwise hand-over-hand mechanism and propose that this mechanism may be applicable to the MACPF/CDC superfamily.