Plant-associated fungi support bacterial resilience following water limitation

Hyphae move matter and microbes to mineral microsites: Integrating the hyphosphere into conceptual models of soil organic matter stabilization

(2022) Craig R. See et al.   GLOBAL CHANGE BIOLOGY

Routes to Roots: Direct Evidence of Water Transport by Arbuscular Mycorrhizal Fungi to Host Plants

(2022) Anne Kakouridis et al.   NEW PHYTOLOGIST

Environmental stress destabilizes microbial networks

(2021) Damian J. Hernandez et al.   ISME Journal

Conserved and reproducible bacterial communities associate with extraradical hyphae of arbuscular mycorrhizal fungi

(2021) Bryan D. Emmett et al.   ISME Journal

Arbuscular mycorrhizal fungi conducting the hyphosphere bacterial orchestra

(2021) Lin Zhang et al.   TRENDS IN PLANT SCIENCE

Taxon-specific microbial growth and mortality patterns reveal distinct temporal population responses to rewetting in a California grassland soil

(2020) Steven J. Blazewicz et al.   ISME Journal

Harnessing rhizosphere microbiomes for drought-resilient crop production

(2020) Franciska T. de Vries et al.   SCIENCE

Microbial extracellular polysaccharide production and aggregate stability controlled by switchgrass (Panicum virgatum) root biomass and soil water potential

(2020) Yonatan Sher et al.   SOIL BIOLOGY & BIOCHEMISTRY

Microbial diversity drives carbon use efficiency in a model soil

(2020) Luiz A. Domeignoz-Horta et al.   Nature Communications

Serendipita bescii promotes winter wheat growth and modulates the host root transcriptome under phosphorus and nitrogen starvation

(2020) Prasun Ray et al.   ENVIRONMENTAL MICROBIOLOGY

The Free-Living Stage Growth Conditions of the Endophytic Fungus Serendipita indica May Regulate Its Potential as Plant Growth Promoting Microbe

(2020) Teresa Dias et al.   Frontiers in Microbiology

Arbuscular mycorrhizal fungi enhance mineralisation of organic phosphorus by carrying bacteria along their extraradical hyphae

(2020) Feiyan Jiang et al.   NEW PHYTOLOGIST

Defining trait-based microbial strategies with consequences for soil carbon cycling under climate change

(2019) Ashish A. Malik et al.   ISME Journal

Arbuscular mycorrhizal fungi stimulate organic phosphate mobilization associated with changing bacterial community structure under field conditions

(2018) Lin Zhang et al.   ENVIRONMENTAL MICROBIOLOGY

Linking diversity, synchrony and stability in soil microbial communities

(2018) Cameron Wagg et al.   FUNCTIONAL ECOLOGY

Suppression of the activity of arbuscular mycorrhizal fungi by the soil microbiota

(2018) Nanna B Svenningsen et al.   ISME Journal

Signal beyond nutrient, fructose, exuded by an arbuscular mycorrhizal fungus triggers phytate mineralization by a phosphate solubilizing bacterium

(2018) Lin Zhang et al.   ISME Journal

Utilization of organic nitrogen by arbuscular mycorrhizal fungi—is there a specific role for protists and ammonia oxidizers?

(2018) Petra Bukovská et al.   MYCORRHIZA

Drought drives rapid shifts in tropical rainforest soil biogeochemistry and greenhouse gas emissions

(2018) Christine S. O’Connell et al.   Nature Communications

Estimating taxon-specific population dynamics in diverse microbial communities

(2018) Benjamin J. Koch et al.   Ecosphere

Drought Stress and Root-Associated Bacterial Communities

(2018) Dan Naylor et al.   Frontiers in Plant Science

Correcting for 16S rRNA gene copy numbers in microbiome surveys remains an unsolved problem

(2018) Stilianos Louca et al.   Microbiome

Dynamic root exudate chemistry and microbial substrate preferences drive patterns in rhizosphere microbial community assembly

(2018) Kateryna Zhalnina et al.   Nature Microbiology

Life in Dry Soils: Effects of Drought on Soil Microbial Communities and Processes

(2018) Joshua P. Schimel   Annual Review of Ecology Evolution and Systematics

Clarifying the interpretation of carbon use efficiency in soil through methods comparison

(2018) Kevin M. Geyer et al.   SOIL BIOLOGY & BIOCHEMISTRY

Crop yield sensitivity of global major agricultural countries to droughts and the projected changes in the future

(2018) Guoyong Leng et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Molecular diagnostic toolkit for Rhizophagus irregularis isolate DAOM-197198 using quantitative PCR assay targeting the mitochondrial genome

(2016) Amine Badri et al.   MYCORRHIZA

Sporulation, bacterial cell envelopes and the origin of life

(2016) Elitza I. Tocheva et al.   NATURE REVIEWS MICROBIOLOGY

Biology and evolution of arbuscular mycorrhizal symbiosis in the light of genomics

(2016) Laurent Kamel et al.   NEW PHYTOLOGIST

Relic DNA is abundant in soil and obscures estimates of soil microbial diversity

(2016) Paul Carini et al.   Nature Microbiology

Quantitative Microbial Ecology through Stable Isotope Probing

(2015) Bruce A. Hungate et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Minor revision to V4 region SSU rRNA 806R gene primer greatly increases detection of SAR11 bacterioplankton

(2015) A Apprill et al.   AQUATIC MICROBIAL ECOLOGY

A Novel Delivery System for the Root Symbiotic Fungus, Sebacina vermifera, and Consequent Biomass Enhancement of Low Lignin COMT Switchgrass Lines

(2015) Prasun Ray et al.   BioEnergy Research

Every base matters: assessing small subunit rRNA primers for marine microbiomes with mock communities, time series and global field samples

(2015) Alma E. Parada et al.   ENVIRONMENTAL MICROBIOLOGY

Do arbuscular mycorrhizal fungi stabilize litter-derived carbon in soil?

(2015) Erik Verbruggen et al.   JOURNAL OF ECOLOGY

Arbuscular mycorrhizal fungi reduce decomposition of woody plant litter while increasing soil aggregation

(2015) E.F. Leifheit et al.   SOIL BIOLOGY & BIOCHEMISTRY

Effects of Glomus intraradices on the growth and reactive oxygen metabolism of foxtail millet under drought

(2014) Minggui Gong et al.   ANNALS OF MICROBIOLOGY

Predominant bacterial and fungal assemblages in agricultural soils during a record drought/heat wave and linkages to enzyme activities of biogeochemical cycling

(2014) V. Acosta-Martínez et al.   APPLIED SOIL ECOLOGY

Optimization of lag time underlies antibiotic tolerance in evolved bacterial populations

(2014) Ofer Fridman et al.   NATURE

Exploring the transfer of recent plant photosynthates to soil microbes: mycorrhizal pathway vs direct root exudation

(2014) Christina Kaiser et al.   NEW PHYTOLOGIST

Growth and death of bacteria and fungi underlie rainfall-induced carbon dioxide pulses from seasonally dried soil

(2013) Steven J. Blazewicz et al.   ECOLOGY

An arbuscular mycorrhizal fungus significantly modifies the soil bacterial community and nitrogen cycling during litter decomposition

(2013) Erin E. Nuccio et al.   ENVIRONMENTAL MICROBIOLOGY

Responses of soil bacterial and fungal communities to extreme desiccation and rewetting

(2013) Romain L Barnard et al.   ISME Journal

Root Exudation of Phytochemicals in Arabidopsis Follows Specific Patterns That Are Developmentally Programmed and Correlate with Soil Microbial Functions

(2013) Jacqueline M. Chaparro et al.   PLoS One

Genome of an arbuscular mycorrhizal fungus provides insight into the oldest plant symbiosis

(2013) E. Tisserant et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Microbial enzymatic responses to drought and to nitrogen addition in a southern California grassland

(2013) Charlotte J. Alster et al.   SOIL BIOLOGY & BIOCHEMISTRY

Pre-exposure to drought increases the resistance of tropical forest soil bacterial communities to extended drought

(2012) Nicholas J Bouskill et al.   ISME Journal

Environmental and stoichiometric controls on microbial carbon-use efficiency in soils

(2012) Stefano Manzoni et al.   NEW PHYTOLOGIST

Arbuscular mycorrhizal fungi enhance photosynthesis, water use efficiency, and growth of frankincense seedlings under pulsed water availability conditions

(2012) Emiru Birhane et al.   OECOLOGIA

Severe drought conditions modify the microbial community structure, size and activity in amended and unamended soils

(2012) S. Hueso et al.   SOIL BIOLOGY & BIOCHEMISTRY

Enhancement of Switchgrass (Panicum virgatum L.) Biomass Production under Drought Conditions by the Ectomycorrhizal Fungus Sebacina vermifera

(2011) Sita R. Ghimire et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Growth and symbiotic effectiveness of an arbuscular mycorrhizal fungus in organic matter in competition with soil bacteria

(2011) Joanne Leigh et al.   FEMS MICROBIOLOGY ECOLOGY

Effects of selected root exudate components on soil bacterial communities

(2011) Shengjing Shi et al.   FEMS MICROBIOLOGY ECOLOGY

Changes in variability of soil moisture alter microbial community C and N resource use

(2011) Lisa K. Tiemann et al.   SOIL BIOLOGY & BIOCHEMISTRY

Endophytic Life Strategies Decoded by Genome and Transcriptome Analyses of the Mutualistic Root Symbiont Piriformospora indica

(2011) Alga Zuccaro et al.   PLoS Pathogens

Arbuscular mycorrhizal fungal spores host bacteria that affect nutrient biodynamics and biocontrol of soil-borne plant pathogens

(2011) A. F. Cruz et al.   Biology Open

Suitability of Quantitative Real-Time PCR To Estimate the Biomass of Fungal Root Endophytes

(2010) C. Tellenbach et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

UniFrac: an effective distance metric for microbial community comparison

(2010) Catherine Lozupone et al.   ISME Journal

Shifting carbon flow from roots into associated microbial communities in response to elevated atmospheric CO2

(2010) B. Drigo et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A phylum level perspective on bacterial cell envelope architecture

(2010) Iain C. Sutcliffe   TRENDS IN MICROBIOLOGY

Amplification-free Illumina sequencing-library preparation facilitates improved mapping and assembly of (G+C)-biased genomes

(2009) Iwanka Kozarewa et al.   NATURE METHODS

Real-time PCR and microscopy: Are the two methods measuring the same unit of arbuscular mycorrhizal fungal abundance?

(2007) Hannes A. Gamper et al.   FUNGAL GENETICS AND BIOLOGY