cBAF complex components and MYC cooperate early in CD8+ T cell fate

In vivo CRISPR screening reveals nutrient signaling processes underpinning CD8+ T cell fate decisions

(2021) Hongling Huang et al.   CELL

Oncohistone mutations enhance chromatin remodeling and alter cell fates

(2021) John D. Bagert et al.   Nature Chemical Biology

Tissue-resident memory T cells in tumor immunity and immunotherapy

(2021) Karolina Okła et al.   JOURNAL OF EXPERIMENTAL MEDICINE

The Complex Integration of T-cell Metabolism and Immunotherapy

(2021) Matthew Z. Madden et al.   Cancer Discovery

Chromatin landscape signals differentially dictate the activities of mSWI/SNF family complexes

(2021) Nazar Mashtalir et al.   SCIENCE

The nf-core framework for community-curated bioinformatics pipelines

(2020) Philip A. Ewels et al.   NATURE BIOTECHNOLOGY

Chemical Inhibitors of a Selective SWI/SNF Function Synergize with ATR Inhibition in Cancer Cell Killing

(2020) Emma J. Chory et al.   ACS Chemical Biology

Epigenetic driver mutations in ARID1A shape cancer immune phenotype and immunotherapy

(2020) Jing Li et al.   JOURNAL OF CLINICAL INVESTIGATION

The SWI/SNF complex in cancer — biology, biomarkers and therapy

(2020) Priya Mittal et al.   Nature Reviews Clinical Oncology

ARID1a Associates with Lymphoid-Restricted Transcription Factors and Has an Essential Role in T Cell Development

(2020) Audrey Astori et al.   JOURNAL OF IMMUNOLOGY

Mammalian SWI/SNF Chromatin Remodeling Complexes: Emerging Mechanisms and Therapeutic Strategies

(2020) Richard C. Centore et al.   TRENDS IN GENETICS

Cell surface antigen profiling of pediatric brain tumors: B7-H3 is consistently expressed and can be targeted via local or systemic CAR T-cell delivery

(2020) Dalia Haydar et al.   NEURO-ONCOLOGY

Remembering to remember: T cell memory maintenance and plasticity

(2019) Kyla D Omilusik et al.   CURRENT OPINION IN IMMUNOLOGY

Inhibition of MYC by the SMARCB1 tumor suppressor

(2019) April M. Weissmiller et al.   Nature Communications

Improved CUT&RUN chromatin profiling tools

(2019) Michael P Meers et al.   eLife

Recurrent SMARCB1 Mutations Reveal a Nucleosome Acidic Patch Interaction Site That Potentiates mSWI/SNF Complex Chromatin Remodeling

(2019) Alfredo M. Valencia et al.   CELL

Targeting REGNASE-1 programs long-lived effector T cells for cancer therapy

(2019) Jun Wei et al.   NATURE

Impaired cell fate through gain-of-function mutations in a chromatin reader

(2019) Liling Wan et al.   NATURE

Stem, Effector, and Hybrid States of Memory CD8+ T Cells

(2019) Enrico Lugli et al.   TRENDS IN IMMUNOLOGY

The structure of INI1/hSNF5 RPT1 and its interactions with the c-MYC:MAX heterodimer provide insights into the interplay between MYC and the SWI/SNF chromatin remodeling complex

(2018) Susan Sammak et al.   FEBS Journal

Modular Organization and Assembly of SWI/SNF Family Chromatin Remodeling Complexes

(2018) Nazar Mashtalir et al.   CELL

SWI/SNF component ARID1A restrains pancreatic neoplasia formation

(2018) Sam C Wang et al.   GUT

Optimized libraries for CRISPR-Cas9 genetic screens with multiple modalities

(2018) Kendall R. Sanson et al.   Nature Communications

SWI/SNF complex in cancer

(2017) Chao Lu et al.   NATURE GENETICS

MYC interaction with the tumor suppressive SWI/SNF complex member INI1 regulates transcription and cellular transformation

(2016) Angelina Stojanova et al.   CELL CYCLE

Metabolic maintenance of cell asymmetry following division in activated T lymphocytes

(2016) Katherine C. Verbist et al.   NATURE

ARID1A loss impairs enhancer-mediated gene regulation and drives colon cancer in mice

(2016) Radhika Mathur et al.   NATURE GENETICS

ATAC-see reveals the accessible genome by transposase-mediated imaging and sequencing

(2016) Xingqi Chen et al.   NATURE METHODS

The Many Roles of BAF (mSWI/SNF) and PBAF Complexes in Cancer

(2016) Courtney Hodges et al.   Cold Spring Harbor Perspectives in Medicine

limma powers differential expression analyses for RNA-sequencing and microarray studies

(2015) Matthew E. Ritchie et al.   NUCLEIC ACIDS RESEARCH

NKD2, a negative regulator of Wnt signaling, suppresses tumor growth and metastasis in osteosarcoma

(2015) S Zhao et al.   ONCOGENE

Normalization of RNA-seq data using factor analysis of control genes or samples

(2014) Davide Risso et al.   NATURE BIOTECHNOLOGY

Molecular regulation of effector and memory T cell differentiation

(2014) John T Chang et al.   NATURE IMMUNOLOGY

IL-10 transcription is negatively regulated by BAF180, a component of the SWI/SNF chromatin remodeling enzyme

(2012) Andrea L Wurster et al.   BMC IMMUNOLOGY

RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome

(2011) Bo Li et al.   BMC BIOINFORMATICS

ATP-dependent chromatin remodeling: genetics, genomics and mechanisms

(2011) Diana C Hargreaves et al.   CELL RESEARCH

The Transcription Factor Myc Controls Metabolic Reprogramming upon T Lymphocyte Activation

(2011) Ruoning Wang et al.   IMMUNITY

Adoptive transfer of syngeneic T cells transduced with a chimeric antigen receptor that recognizes murine CD19 can eradicate lymphoma and normal B cells

(2010) J. N. Kochenderfer et al.   BLOOD

Distinct Roles for IL-2 and IL-15 in the Differentiation and Survival of CD8+ Effector and Memory T Cells

(2010) D. M. Mitchell et al.   JOURNAL OF IMMUNOLOGY

Dynamic regulation ofc-Myc proto-oncogene expression during lymphocyte development revealed by aGFP-c-Myc knock-in mouse

(2008) Ching-Yu Huang et al.   EUROPEAN JOURNAL OF IMMUNOLOGY

ES cell pluripotency and germ-layer formation require the SWI/SNF chromatin remodeling component BAF250a

(2008) X. Gao et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA