Seasonality of parasitic and saprotrophic zoosporic fungi: linking sequence data to ecological traits

Temporal variation in community structure of zoosporic fungi in Lake Biwa, Japan

(2021) P Song et al.   AQUATIC MICROBIAL ECOLOGY

Characterizing the “fungal shunt”: Parasitic fungi on diatoms affect carbon flow and bacterial communities in aquatic microbial food webs

(2021) Isabell Klawonn et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Intercomparison of Two Fluorescent Dyes to Visualize Parasitic Fungi (Chytridiomycota) on Phytoplankton

(2021) Isabell Klawonn et al.   MICROBIAL ECOLOGY

The Lake Ice Continuum Concept: Influence of Winter Conditions on Energy and Ecosystem Dynamics

(2021) E. Cavaliere et al.   Journal of Geophysical Research-Biogeosciences

Morphology, Ultrastructure, and Molecular Phylogeny of Aphelidium collabens sp. nov. (Aphelida), a Parasitoid of a Green Alga Coccomyxa sp.

(2020) Kensuke Seto et al.   PROTIST

Infection of filamentous phytoplankton by fungal parasites enhances herbivory in pelagic food webs

(2020) Thijs Frenken et al.   LIMNOLOGY AND OCEANOGRAPHY

Single dominant diatom can host diverse parasitic fungi with different degree of host specificity

(2020) Maiko Kagami et al.   LIMNOLOGY AND OCEANOGRAPHY

Diversity, spatial distribution and activity of fungi in freshwater ecosystems

(2019) Cécile Lepère et al.   PeerJ

Fungi in aquatic ecosystems

(2019) Hans-Peter Grossart et al.   NATURE REVIEWS MICROBIOLOGY

Diversity and Hidden Host Specificity of Chytrids Infecting Colonial Volvocacean Algae

(2018) Silke Van den Wyngaert et al.   JOURNAL OF EUKARYOTIC MICROBIOLOGY

Fitness and eco-physiological response of a chytrid fungal parasite infecting planktonic cyanobacteria to thermal and host genotype variation

(2018) Ramsy Agha et al.   PARASITOLOGY

Adaptation of a Chytrid Parasite to Its Cyanobacterial Host Is Hampered by Host Intraspecific Diversity

(2018) Ramsy Agha et al.   Frontiers in Microbiology

Rediscovering Zygorhizidium affluens Canter - Molecular taxonomy, infectious cycle, and cryopreservation of a chytrid infecting the bloom-forming diatom Asterionella formosa.

(2018) Cecilia Rad-Menéndez et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Introducing ribosomal tandem repeat barcoding for fungi

(2018) Christian Wurzbacher et al.   Molecular Ecology Resources

Comparison of sterol and fatty acid profiles of chytrids and their hosts reveals trophic upgrading of nutritionally inadequate phytoplankton by fungal parasites

(2018) Mélanie Gerphagnon et al.   ENVIRONMENTAL MICROBIOLOGY

Integrating chytrid fungal parasites into plankton ecology: research gaps and needs

(2017) Thijs Frenken et al.   ENVIRONMENTAL MICROBIOLOGY

Carbon and nutrients of indigestible pollen are transferred to zooplankton by chytrid fungi

(2017) Maiko Kagami et al.   FRESHWATER BIOLOGY

Monoblepharidomycetes diversity includes new parasitic and saprotrophic species with highly intronized rDNA

(2017) Sergey A. Karpov et al.   Fungal Biology

Fungal communities in Scandinavian lakes along a longitudinal gradient

(2017) Maryia Khomich et al.   Fungal Ecology

Exact sequence variants should replace operational taxonomic units in marker-gene data analysis

(2017) Benjamin J Callahan et al.   ISME Journal

A New Parasitic Chytrid, Staurastromyces oculus (Rhizophydiales, Staurastromycetaceae fam. nov.), Infecting the Freshwater Desmid Staurastrum sp.

(2017) Silke Van den Wyngaert et al.   PROTIST

Abrupt stop of deep water turnover with lake warming: Drastic consequences for algal primary producers

(2017) Yana Yankova et al.   Scientific Reports

Discovery of dark matter fungi in aquatic ecosystems demands a reappraisal of the phylogeny and ecology of zoosporic fungi

(2016) Hans-Peter Grossart et al.   Fungal Ecology

The role of hyperparasitism in microbial pathogen ecology and evolution

(2016) Steven R Parratt et al.   ISME Journal

High habitat-specificity in fungal communities in oligo-mesotrophic, temperate Lake Stechlin (North-East Germany)

(2016) Christian Wurzbacher et al.   MycoKeys

Novel chytrid lineages dominate fungal sequences in diverse marine and freshwater habitats

(2016) André M. Comeau et al.   Scientific Reports

Novel basal, fungal lineages from freshwater phytoplankton and lake samples

(2015) Seiji Ishida et al.   Environmental Microbiology Reports

Shotgun metagenomes and multiple primer pair-barcode combinations of amplicons reveal biases in metabarcoding analyses of fungi

(2015) Leho Tedersoo et al.   MycoKeys

Identification of Habitat-Specific Biomes of Aquatic Fungal Communities Using a Comprehensive Nearly Full-Length 18S rRNA Dataset Enriched with Contextual Data

(2015) Katrin Panzer et al.   PLoS One

Environmental Conditions Determine the Course and Outcome of Phytoplankton Chytridiomycosis

(2015) Thomas Rohrlack et al.   PLoS One

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

(2014) Alexandros Stamatakis   BIOINFORMATICS

Morphology, phylogeny, and ecology of the aphelids (Aphelidea, Opisthokonta) and proposal for the new superphylum Opisthosporidia

(2014) Sergey A. Karpov et al.   Frontiers in Microbiology

Mycoloop: chytrids in aquatic food webs

(2014) Maiko Kagami et al.   Frontiers in Microbiology

Chytrid epidemics may increase genetic diversity of a diatom spring-bloom

(2013) Alena S Gsell et al.   ISME Journal

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

(2013) K. Katoh et al.   MOLECULAR BIOLOGY AND EVOLUTION

Three new genera in Chytridiales from aquatic habitats in Argentina

(2013) Carlos G. Vélez et al.   MYCOLOGIA

Temperature Alters Host Genotype-Specific Susceptibility to Chytrid Infection

(2013) Alena S. Gsell et al.   PLoS One

Beyond the Plankton Ecology Group (PEG) Model: Mechanisms Driving Plankton Succession

(2012) Ulrich Sommer et al.   Annual Review of Ecology Evolution and Systematics

Temporal variation of the small eukaryotic community in two freshwater lakes: emphasis on zoosporic fungi

(2012) E Lefèvre et al.   AQUATIC MICROBIAL ECOLOGY

Phytoplankton chytridiomycosis: community structure and infectivity of fungal parasites in aquatic ecosystems

(2012) Serena Rasconi et al.   ENVIRONMENTAL MICROBIOLOGY

Spatiotemporal variation in the distribution of chytrid parasites in diatom host populations

(2012) ALENA S. GSELL et al.   FRESHWATER BIOLOGY

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

Effects of pollen leaching and microbial degradation on organic carbon and nutrient availability in lake water

(2011) Stefan Rösel et al.   AQUATIC SCIENCES

Chytrid infections and diatom spring blooms: paradoxical effects of climate warming on fungal epidemics in lakes

(2011) BAS W. IBELINGS et al.   FRESHWATER BIOLOGY

Genetic and phenotypic influences on clone-level success and host specialization in a generalist parasite

(2011) A. V. KOEHLER et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

Food quality of anemophilous plant pollen for zooplankton

(2011) Hélène Masclaux et al.   LIMNOLOGY AND OCEANOGRAPHY

Application of an inexpensive and high-throughput genomic DNA extraction method for the molecular ecology of zooplanktonic diapausing eggs

(2011) Javier Montero-Pau et al.   LIMNOLOGY AND OCEANOGRAPHY-METHODS

Fungi in lake ecosystems

(2009) CM Wurzbacher et al.   AQUATIC MICROBIAL ECOLOGY

trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses

(2009) S. Capella-Gutierrez et al.   BIOINFORMATICS

Warming promotes cold-adapted phytoplankton in temperate lakes and opens a loophole for Oscillatoriales in spring

(2008) TOM SHATWELL et al.   GLOBAL CHANGE BIOLOGY

Lake warming favours small-sized planktonic diatom species

(2008) M. Winder et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Ultrastructural and molecular analyses of Rhizophydiales (Chytridiomycota) isolates from North America and Argentina

(2008) Peter M. Letcher et al.