Newly Discovered Alleles of the Tomato Antiflorigen Gene SELF PRUNING Provide a Range of Plant Compactness and Yield

Optimization of Tomato Productivity Using Flowering Time Variants

(2021) Sujeevan Rajendran et al.   Agronomy-Basel

Major Impacts of Widespread Structural Variation on Gene Expression and Crop Improvement in Tomato

(2020) Michael Alonge et al.   CELL

New Horizons for Dissecting Epistasis in Crop Quantitative Trait Variation

(2020) Sebastian Soyk et al.   Annual Review of Genetics

Protocol Update for large-scale genome and gene function analysis with the PANTHER classification system (v.14.0)

(2019) Huaiyu Mi et al.   Nature Protocols

De Novo Domestication: An Alternative Route toward New Crops for the Future

(2019) Alisdair R. Fernie et al.   Molecular Plant

The flowering hormone florigen accelerates secondary cell wall biogenesis to harmonize vascular maturation with reproductive development

(2019) Akiva Shalit-Kaneh et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genomic Evidence for Complex Domestication History of the Cultivated Tomato in Latin America

(2019) Hamid Razifard et al.   MOLECULAR BIOLOGY AND EVOLUTION

On the Road to Breeding 4.0: Unraveling the Good, the Bad, and the Boring of Crop Quantitative Genomics

(2018) Jason G. Wallace et al.   Annual Review of Genetics

The Arabidopsis thaliana Nuclear Factor Y Transcription Factors

(2017) Hang Zhao et al.   Frontiers in Plant Science

Genomic variation in tomato, from wild ancestors to contemporary breeding accessions

(2015) José Blanca et al.   BMC GENOMICS

A cascade of arabinosyltransferases controls shoot meristem size in tomato

(2015) Cao Xu et al.   NATURE GENETICS

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

Optimization of crop productivity in tomato using induced mutations in the florigen pathway

(2014) Soon Ju Park et al.   NATURE GENETICS

Genomic analyses provide insights into the history of tomato breeding

(2014) Tao Lin et al.   NATURE GENETICS

Florigen and anti-florigen – a systemic mechanism for coordinating growth and termination in flowering plants

(2014) Eliezer Lifschitz et al.   Frontiers in Plant Science

Tomato Yield Heterosis Is Triggered by a Dosage Sensitivity of the Florigen Pathway That Fine-Tunes Shoot Architecture

(2013) Ke Jiang et al.   PLoS Genetics

RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome

(2011) Bo Li et al.   BMC BIOINFORMATICS

Distribution of SUN, OVATE, LC, and FAS in the Tomato Germplasm and the Relationship to Fruit Shape Diversity

(2011) G. R. Rodriguez et al.   PLANT PHYSIOLOGY

Increase in Tomato Locule Number Is Controlled by Two Single-Nucleotide Polymorphisms Located Near WUSCHEL

(2011) S. Munos et al.   PLANT PHYSIOLOGY

Rate of meristem maturation determines inflorescence architecture in tomato

(2011) S. J. Park et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The flowering gene SINGLE FLOWER TRUSS drives heterosis for yield in tomato

(2010) Uri Krieger et al.   NATURE GENETICS

The flowering hormone florigen functions as a general systemic regulator of growth and termination

(2009) A. Shalit et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

(2009) Ben Langmead et al.   GENOME BIOLOGY