Novel HLA associations with outcomes of Mycobacterium tuberculosis exposure and sarcoidosis in individuals of African ancestry using nearest‐neighbor feature selection

Theoretical properties of distance distributions and novel metrics for nearest-neighbor feature selection

(2021) Bryan A. Dawkins et al.   PLoS One

Combination of HLA-DR on Mycobacterium tuberculosis-Specific Cells and Tuberculosis Antigen/Phytohemagglutinin Ratio for Discriminating Active Tuberculosis From Latent Tuberculosis Infection

(2021) Ying Luo et al.   Frontiers in Immunology

Nearest-neighbor Projected-Distance Regression (NPDR) for detecting network interactions with adjustments for multiple tests and confounding

(2020) Trang T Le et al.   BIOINFORMATICS

IFN-γ-independent immune markers of Mycobacterium tuberculosis exposure

(2019) Lenette L. Lu et al.   NATURE MEDICINE

Sarcoidosis

(2019) Johan Grunewald et al.   Nature Reviews Disease Primers

Resistance and Susceptibility to Mycobacterium tuberculosis Infection and Disease in Tuberculosis Households in Kampala, Uganda

(2018) Catherine M Stein et al.   AMERICAN JOURNAL OF EPIDEMIOLOGY

Benchmarking Relief-Based Feature Selection Methods for Bioinformatics Data Mining

(2018) Ryan J. Urbanowicz et al.   JOURNAL OF BIOMEDICAL INFORMATICS

Long-term stability of resistance to latent M. tuberculosis infection in highly exposed TB household contacts in Kampala, Uganda

(2018) Catherine M Stein et al.   CLINICAL INFECTIOUS DISEASES

Prognostic value of interferon-γ release assays and tuberculin skin test in predicting the development of active tuberculosis (UK PREDICT TB): a prospective cohort study

(2018) Ibrahim Abubakar et al.   LANCET INFECTIOUS DISEASES

Transcriptional networks are associated with resistance to Mycobacterium tuberculosis infection

(2017) Chetan Seshadri et al.   PLoS One

Do HLA class II genes protect against pulmonary tuberculosis? A systematic review and meta-analysis

(2016) A. Oliveira-Cortez et al.   EUROPEAN JOURNAL OF CLINICAL MICROBIOLOGY & INFECTIOUS DISEASES

Association of human leukocyte antigen DRB1 polymorphism and tuberculosis: a meta-analysis

(2016) P-L. Yang et al.   INTERNATIONAL JOURNAL OF TUBERCULOSIS AND LUNG DISEASE

Is there any association between Sarcoidosis and infectious agents?: a systematic review and meta-analysis

(2016) Tiago Esteves et al.   BMC Pulmonary Medicine

Association ofHLA-DRB1with Sarcoidosis Susceptibility and Progression in African Americans

(2015) Albert M. Levin et al.   AMERICAN JOURNAL OF RESPIRATORY CELL AND MOLECULAR BIOLOGY

Racial Difference in Sarcoidosis Mortality in the United States

(2015) Mehdi Mirsaeidi et al.   CHEST

Genetics of Sarcoidosis

(2015) Tasha E. Fingerlin et al.   CLINICS IN CHEST MEDICINE

Polymorphisms in HLA-DRB1 Gene and the Risk of Tuberculosis: A Meta-analysis of 31 Studies

(2015) Xiang Tong et al.   LUNG

Differential co-expression network centrality and machine learning feature selection for identifying susceptibility hubs in networks with scale-free structure

(2015) Caleb A Lareau et al.   BioData Mining

Performance of HLA allele prediction methods in African Americans for class II genes HLA-DRB1, −DQB1, and –DPB1

(2014) Albert M Levin et al.   BMC GENETICS

HLA class II gene associations in African American Type 1 diabetes reveal a protective HLA-DRB1*03 haplotype

(2013) J. M. M. Howson et al.   DIABETIC MEDICINE

HIBAG—HLA genotype imputation with attribute bagging

(2013) X Zheng et al.   PHARMACOGENOMICS JOURNAL

ReliefSeq: A Gene-Wise Adaptive-K Nearest-Neighbor Feature Selection Tool for Finding Gene-Gene Interactions and Main Effects in mRNA-Seq Gene Expression Data

(2013) Brett A. McKinney et al.   PLoS One

HLA-A and HLA-DRB1 amino acid polymorphisms are associated with susceptibility and protection to pulmonary tuberculosis in a Greek population

(2012) Eleni E. Magira et al.   HUMAN IMMUNOLOGY

Sarcoidosis Th17 Cells are ESAT-6 Antigen Specific but Demonstrate Reduced IFN-γ Expression

(2012) Bradley W. Richmond et al.   JOURNAL OF CLINICAL IMMUNOLOGY

Genome-Wide Association Study of African and European Americans Implicates Multiple Shared and Ethnic Specific Loci in Sarcoidosis Susceptibility

(2012) Indra Adrianto et al.   PLoS One

High-throughput, high-fidelity HLA genotyping with deep sequencing

(2012) C. Wang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Epistasis network centrality analysis yields pathway replication across two GWAS cohorts for bipolar disorder

(2012) A Pandey et al.   Translational Psychiatry

HLA class II alleles as markers of tuberculosis susceptibility and resistance

(2011) R. Duarte et al.   Revista Portuguesa de Pneumologia

Capturing the Spectrum of Interaction Effects in Genetic Association Studies by Simulated Evaporative Cooling Network Analysis

(2009) Brett A. McKinney et al.   PLoS Genetics