The evolutionary history and mechanistic basis of female ornamentation in a tropical songbird

Male White-shouldered Fairywrens (Malurus alboscapulatus) elevate androgens greater when courting females than during territorial challenges

(2022) Jordan Boersma et al.   HORMONES AND BEHAVIOR

The evolutionary history and mechanistic basis of female ornamentation in a tropical songbird

(2022) Erik D. Enbody et al.   EVOLUTION

Patterns of genetic divergence and demographic history shed light on island‐mainland population dynamics and melanic plumage evolution in the white‐winged Fairywren

(2021) Jennifer Walsh et al.   EVOLUTION

Male-like female morphs in hummingbirds: the evolution of a widespread sex-limited plumage polymorphism

(2021) Eleanor S. Diamant et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Asymmetric introgression reveals the genetic architecture of a plumage trait

(2021) Georgy A. Semenov et al.   Nature Communications

Sexual differentiation of brain and other tissues: Five questions for the next 50 years

(2020) Arthur P. Arnold   HORMONES AND BEHAVIOR

A genetic mechanism for sexual dichromatism in birds

(2020) Małgorzata A. Gazda et al.   SCIENCE

Testosterone induces plumage ornamentation followed by enhanced territoriality in a female songbird

(2020) Jordan Boersma et al.   BEHAVIORAL ECOLOGY

Testosterone regulates CYP2J19 -linked carotenoid signal expression in male red-backed fairywrens ( Malurus melanocephalus )

(2020) Sarah Khalil et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Selection on a small genomic region underpins differentiation in multiple color traits between two warbler species

(2020) Silu Wang et al.   Evolution Letters

Genomic islands of differentiation in a rapid avian radiation have been driven by recent selective sweeps

(2020) Hussein A. Hejase et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Social organisation and breeding biology of the White-shouldered Fairywren (Malurus alboscapulatus)

(2019) Erik D. Enbody et al.   EMU

Evaluating testosterone as a phenotypic integrator: From tissues to individuals to species

(2019) S.E. Lipshutz et al.   MOLECULAR AND CELLULAR ENDOCRINOLOGY

Behavioral Isolation and Incipient Speciation in Birds

(2018) J. Albert C. Uy et al.   Annual Review of Ecology Evolution and Systematics

Female ornamentation is associated with elevated aggression and testosterone in a tropical songbird

(2018) Erik D Enbody et al.   BEHAVIORAL ECOLOGY

Male mate choice based on female coloration in a lizard: the role of a juvenile trait

(2018) Josabel Belliure et al.   BEHAVIORAL ECOLOGY

Molecular phylogenetics and species limits in a cryptically coloured radiation of Australo-Papuan passerine birds (Pachycephalidae: Colluricincla )

(2018) Petter Z. Marki et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Fifty shades of white: how white feather brightness differs among species

(2018) Branislav Igic et al.   NATURWISSENSCHAFTEN

Bayesian Divergence-Time Estimation with Genome-Wide Single-Nucleotide Polymorphism Data of Sea Catfishes (Ariidae) Supports Miocene Closure of the Panamanian Isthmus

(2018) Madlen Stange et al.   SYSTEMATIC BIOLOGY

Fifty shades of white: how white feather brightness differs among species

(2018) Branislav Igic et al.   Science of Nature

Sexual selection and its evolutionary consequences in female animals

(2018) Robin M. Hare et al.   BIOLOGICAL REVIEWS

UniProt: a worldwide hub of protein knowledge

(2018)   NUCLEIC ACIDS RESEARCH

The role of sexual and natural selection in shaping patterns of sexual dichromatism in the largest family of songbirds (Aves: Thraupidae)

(2017) Allison J. Shultz et al.   EVOLUTION

Supermatrix phylogeny and biogeography of the Australasian Meliphagides radiation (Aves: Passeriformes)

(2017) Petter Z. Marki et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Production of plumage ornaments among males and females of two closely related tropical passerine bird species

(2017) Erik D. Enbody et al.   Ecology and Evolution

Repeated divergent selection on pigmentation genes in a rapid finch radiation

(2017) Leonardo Campagna et al.   Science Advances

SweepFinder2: increased sensitivity, robustness and flexibility

(2016) Michael DeGiorgio et al.   BIOINFORMATICS

Plumage Genes and Little Else Distinguish the Genomes of Hybridizing Warblers

(2016) David P.L. Toews et al.   CURRENT BIOLOGY

Variation in social relationships relates to song preferences and EGR1 expression in a female songbird

(2016) Hannah E. Schubloom et al.   Developmental Neurobiology

Testosterone activates sexual dimorphism including male-typical carotenoid but not melanin plumage pigmentation in a female bird

(2016) Willow R. Lindsay et al.   JOURNAL OF EXPERIMENTAL BIOLOGY

BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs

(2015) Felipe A. Simão et al.   BIOINFORMATICS

Transcriptomic analyses of regenerating adult feathers in chicken

(2015) Chen Siang Ng et al.   BMC GENOMICS

Linked selection and recombination rate variation drive the evolution of the genomic landscape of differentiation across the speciation continuum ofFicedulaflycatchers

(2015) Reto Burri et al.   GENOME RESEARCH

Rapid evolution of elaborate male coloration is driven by visual system in Australian fairy-wrens (Maluridae)

(2015) N. R. Friedman et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

Transcriptomics of colour patterning and coloration shifts in crows

(2015) J. W. Poelstra et al.   MOLECULAR ECOLOGY

Regulatory mutations in TBX3 disrupt asymmetric hair pigmentation that underlies Dun camouflage color in horses

(2015) Freyja Imsland et al.   NATURE GENETICS

Rcorrector: efficient and accurate error correction for Illumina RNA-seq reads

(2015) Li Song et al.   GigaScience

Polymorphism in the Serotonin Receptor 2a (HTR2A) Gene as Possible Predisposal Factor for Aggressive Traits

(2015) Zsofia Banlaki et al.   PLoS One

Cross Talk between KGF and KITLG Proteins Implicated with Ovarian Folliculogenesis in Buffalo Bubalus bubalis

(2015) Deepak Panwar et al.   PLoS One

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

ANGSD: Analysis of Next Generation Sequencing Data

(2014) Thorfinn Sand Korneliussen et al.   BMC BIOINFORMATICS

Regulatory mechanisms of testosterone-stimulated song in the sensorimotor nucleus HVC of female songbirds

(2014) Falk Dittrich et al.   BMC NEUROSCIENCE

Genomic Organization, Transcriptomic Analysis, and Functional Characterization of Avian α- and β-Keratins in Diverse Feather Forms

(2014) Chen Siang Ng et al.   Genome Biology and Evolution

Female ornamentation in Malurus fairy-wrens: a hidden evolutionary gem for understanding female perspectives on social and sexual selection

(2013) Jordan Karubian   EMU

Potential for sexual conflict assessed via testosterone-mediated transcriptional changes in liver and muscle of a songbird

(2013) M. P. Peterson et al.   JOURNAL OF EXPERIMENTAL BIOLOGY

Testosterone Affects Neural Gene Expression Differently in Male and Female Juncos: A Role for Hormones in Mediating Sexual Dimorphism and Conflict

(2013) Mark P. Peterson et al.   PLoS One

Different modes of evolution in males and females generate dichromatism in fairy-wrens (Maluridae)

(2013) Allison E. Johnson et al.   Ecology and Evolution

Inferring Species Trees Directly from Biallelic Genetic Markers: Bypassing Gene Trees in a Full Coalescent Analysis

(2012) David Bryant et al.   MOLECULAR BIOLOGY AND EVOLUTION

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

The evolution of female ornaments and weaponry: social selection, sexual selection and ecological competition

(2012) J. A. Tobias et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Identification of Genes Related to White and Black Plumage Formation by RNA-Seq from White and Black Feather Bulbs in Ducks

(2012) Shijun Li et al.   PLoS One

A multigene phylogeny examining evolutionary and ecological relationships in the Australo-papuan wrens of the subfamily Malurinae (Aves)

(2011) Amy C. Driskell et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Full-length transcriptome assembly from RNA-Seq data without a reference genome

(2011) Manfred G Grabherr et al.   NATURE BIOTECHNOLOGY

Sexually Selected Male Plumage Color Is Testosterone Dependent in a Tropical Passerine Bird, the Red-Backed Fairy-Wren (Malurus melanocephalus)

(2011) Willow R. Lindsay et al.   PLoS One

Genome-wide synteny through highly sensitive sequence alignment: Satsuma

(2010) M. G. Grabherr et al.   BIOINFORMATICS

Fast and accurate long-read alignment with Burrows–Wheeler transform

(2010) Heng Li et al.   BIOINFORMATICS

The genome of a songbird

(2010) Wesley C. Warren et al.   NATURE

High-quality draft assemblies of mammalian genomes from massively parallel sequence data

(2010) S. Gnerre et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Sequencing of 50 Human Exomes Reveals Adaptation to High Altitude

(2010) X. Yi et al.   SCIENCE

Gene ontology analysis for RNA-seq: accounting for selection bias

(2010) Matthew D Young et al.   GENOME BIOLOGY

Female-limited mimetic polymorphism: a review of theories and a critique of sexual selection as balancing selection

(2009) Krushnamegh Kunte   ANIMAL BEHAVIOUR

Genome-wide scans for footprints of natural selection

(2009) T. K. Oleksyk et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

EVOLUTION OF SEXUAL DICHROMATISM. 1. CONVERGENT LOSSES OF ELABORATE FEMALE COLORATION IN NEW WORLD ORIOLES (ICTERUSSPP.)

(2008) CHRISTOPHER M. HOFMANN et al.   AUK

Relatedness mapping and tracts of relatedness for genome-wide data in the presence of linkage disequilibrium

(2008) Anders Albrechtsen et al.   GENETIC EPIDEMIOLOGY