Gene expression profiling of granule cells and Purkinje cells in the zebrafish cerebellum

CbGRiTS: Cerebellar gene regulation in time and space

(2015) Thomas Ha et al.   DEVELOPMENTAL BIOLOGY

Establishment of Gal4 transgenic zebrafish lines for analysis of development of cerebellar neural circuitry

(2015) Miki Takeuchi et al.   DEVELOPMENTAL BIOLOGY

Deletion of Prdm8 impairs development of upper-layer neocortical neurons

(2015) Mayuko Inoue et al.   GENES TO CELLS

GDF10 is a signal for axonal sprouting and functional recovery after stroke

(2015) Songlin Li et al.   NATURE NEUROSCIENCE

Type IV Collagen Controls the Axogenesis of Cerebellar Granule Cells by Regulating Basement Membrane Integrity in Zebrafish

(2015) Miki Takeuchi et al.   PLoS Genetics

The c-Ski family member and transcriptional regulator Corl2/Skor2 promotes early differentiation of cerebellar Purkinje cells

(2014) Tomoya Nakatani et al.   DEVELOPMENTAL BIOLOGY

Growth and differentiation factor 10 (Gdf10) is involved in Bergmann glial cell development underShhregulation

(2014) Nora Mecklenburg et al.   GLIA

Ensembl 2015

(2014) Fiona Cunningham et al.   NUCLEIC ACIDS RESEARCH

Gene-expression analysis of hair cell regeneration in the zebrafish lateral line

(2014) L. Jiang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Retrograde semaphorin signaling regulates synapse elimination in the developing mouse brain

(2014) N. Uesaka et al.   SCIENCE

Cerebellum and spatial cognition in goldfish

(2013) Emilio Durán et al.   BEHAVIOURAL BRAIN RESEARCH

Fluorescent activated cell sorting (FACS) combined with gene expression microarrays for transcription enrichment profiling of zebrafish lateral line cells

(2013) Viviana E. Gallardo et al.   METHODS

SeeDB: a simple and morphology-preserving optical clearing agent for neuronal circuit reconstruction

(2013) Meng-Tsen Ke et al.   NATURE NEUROSCIENCE

Development and specification of cerebellar stem and progenitor cells in zebrafish: from embryo to adult

(2013) Jan Kaslin et al.   Neural Development

TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions

(2013) Daehwan Kim et al.   GENOME BIOLOGY

Dynamic changes in the gene expression of zebrafish Reelin receptors during embryogenesis and hatching period

(2012) Hideaki Imai et al.   DEVELOPMENT GROWTH & DIFFERENTIATION

Development and evolution of cerebellar neural circuits

(2012) Mitsuhiro Hashimoto et al.   DEVELOPMENT GROWTH & DIFFERENTIATION

The transcription factor Uncx4.1 acts in a short window of midbrain dopaminergic neuron differentiation

(2012) Tamara I Rabe et al.   Neural Development

Dendritic calcium signaling in cerebellar Purkinje cell

(2012) Kazuo Kitamura et al.   NEURAL NETWORKS

Development of the cerebellum and cerebellar neural circuits

(2011) Masahiko Hibi et al.   Developmental Neurobiology

Systematizing and Cloning of Genes Involved in the Cerebellar Cortex Circuit Development

(2011) Teiichi Furuichi et al.   NEUROCHEMICAL RESEARCH

g:Profiler—a web server for functional interpretation of gene lists (2011 update)

(2011) Jüri Reimand et al.   NUCLEIC ACIDS RESEARCH

Effects of local anesthesia of the cerebellum on classical fear conditioning in goldfish

(2010) Masayuki Yoshida et al.   Behavioral and Brain Functions

Trans-Synaptic Interaction of GluRδ2 and Neurexin through Cbln1 Mediates Synapse Formation in the Cerebellum

(2010) Takeshi Uemura et al.   CELL

Proneural gene-linked neurogenesis in zebrafish cerebellum

(2010) Shuichi Kani et al.   DEVELOPMENTAL BIOLOGY

Atypical Protein Kinase C Regulates Primary Dendrite Specification of Cerebellar Purkinje Cells by Localizing Golgi Apparatus

(2010) K. Tanabe et al.   JOURNAL OF NEUROSCIENCE

Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

(2010) Cole Trapnell et al.   NATURE BIOTECHNOLOGY

Migration, early axonogenesis, and Reelin-dependent layer-forming behavior of early/posterior-born Purkinje cells in the developing mouse lateral cerebellum

(2010) Takaki Miyata et al.   Neural Development

Foxp4 is essential in maintenance of purkinje cell dendritic arborization in the mouse cerebellum

(2010) W.Y. Tam et al.   NEUROSCIENCE

Cbln1 Is a Ligand for an Orphan Glutamate Receptor  2, a Bidirectional Synapse Organizer

(2010) K. Matsuda et al.   SCIENCE

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

(2009) M. D. Robinson et al.   BIOINFORMATICS

Anatomy of zebrafish cerebellum and screen for mutations affecting its development

(2009) Young-Ki Bae et al.   DEVELOPMENTAL BIOLOGY

FACS-Assisted Microarray Profiling Implicates Novel Genes and Pathways in Zebrafish Gastrointestinal Tract Development

(2009) Carsten Stuckenholz et al.   GASTROENTEROLOGY

Stem Cells in the Adult Zebrafish Cerebellum: Initiation and Maintenance of a Novel Stem Cell Niche

(2009) J. Kaslin et al.   JOURNAL OF NEUROSCIENCE

Targets of the nuclear factor I regulon involved in early and late development of postmitotic cerebellar granule neurons

(2009) Wei Wang et al.   JOURNAL OF NEUROSCIENCE RESEARCH

Cerebellum lesion impairs eyeblink-like classical conditioning in goldfish

(2009) A. Gómez et al.   NEUROSCIENCE

Cerebellum-Like Structures and Their Implications for Cerebellar Function

(2008) Curtis C. Bell et al.   Annual Review of Neuroscience

RNA profiling of FAC-sorted neurons from the developing zebrafish spinal cord

(2008) Gustavo A. Cerda et al.   DEVELOPMENTAL DYNAMICS

Identification of a novel transcriptional corepressor, Corl2, as a cerebellar Purkinje cell-selective marker

(2008) Yasuko Minaki et al.   GENE EXPRESSION PATTERNS

Morphological analysis of the mormyrid cerebellum using immunohistochemistry, with emphasis on the unusual neuronal organization of the valvula

(2008) Johannes Meek et al.   JOURNAL OF COMPARATIVE NEUROLOGY

Control of mental activities by internal models in the cerebellum

(2008) Masao Ito   NATURE REVIEWS NEUROSCIENCE

Cerebellar development transcriptome database (CDT-DB): Profiling of spatio-temporal gene expression during the postnatal development of mouse cerebellum

(2008) Akira Sato et al.   NEURAL NETWORKS

Enhancement of Both Long-Term Depression Induction and Optokinetic Response Adaptation in Mice Lacking Delphilin

(2008) Tomonori Takeuchi et al.   PLoS One

Genetic dissection of neural circuits by Tol2 transposon-mediated Gal4 gene and enhancer trapping in zebrafish

(2008) K. Asakawa et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA