PSnoD: identifying potential snoRNA-disease associations based on bounded nuclear norm regularization

Non-coding small nucleolar RNA SNORD17 promotes the progression of hepatocellular carcinoma through a positive feedback loop upon p53 inactivation

(2022) Junnan Liang et al.   CELL DEATH AND DIFFERENTIATION

Deepm5C: A deep-learning-based hybrid framework for identifying human RNA N5-methylcytosine sites using a stacking strategy

(2022) Md Mehedi Hasan et al.   MOLECULAR THERAPY

The Potential Role of Small Nucleolar RNAs in Cancers – An Evidence Map

(2022) Fanqi Wu et al.   International Journal of General Medicine

BERT4Bitter: a bidirectional encoder representations from transformers (BERT)-based model for improving the prediction of bitter peptides

(2021) Phasit Charoenkwan et al.   BIOINFORMATICS

Global cancer statistics 2020: GLOBOCAN estimates of incidence and mortality worldwide for 36 cancers in 185 countries

(2021) Hyuna Sung et al.   CA-A CANCER JOURNAL FOR CLINICIANS

Improved prediction and characterization of anticancer activities of peptides using a novel flexible scoring card method

(2021) Phasit Charoenkwan et al.   Scientific Reports

StackIL6: a stacking ensemble model for improving the prediction of IL-6 inducing peptides

(2021) Phasit Charoenkwan et al.   BRIEFINGS IN BIOINFORMATICS

Predicting LncRNA-Disease Association Based on Generative Adversarial Network

(2021) Biao Du et al.   CURRENT GENE THERAPY

Integrative machine learning framework for the identification of cell-specific enhancers from the human genome

(2021) Shaherin Basith et al.   BRIEFINGS IN BIOINFORMATICS

A novel sequence-based predictor for identifying and characterizing thermophilic proteins using estimated propensity scores of dipeptides

(2021) Phasit Charoenkwan et al.   Scientific Reports

Array programming with NumPy

(2020) Charles R. Harris et al.   NATURE

MNDR v3.0: mammal ncRNA–disease repository with increased coverage and annotation

(2020) Lin Ning et al.   NUCLEIC ACIDS RESEARCH

GAERF: predicting lncRNA-disease associations by graph auto-encoder and random forest

(2020) Qing-Wen Wu et al.   BRIEFINGS IN BIOINFORMATICS

The Function of Non-Coding RNAs in Lung Cancer Tumorigenesis

(2019) Cornelia Braicu et al.   Cancers

Drug repositioning based on bounded nuclear norm regularization

(2019) Mengyun Yang et al.   BIOINFORMATICS

Identification of Eight Small Nucleolar RNAs as Survival Biomarkers and Their Clinical Significance in Gastric Cancer

(2019) Xuning Wang et al.   Frontiers in Oncology

Overlap matrix completion for predicting drug-associated indications

(2019) Mengyun Yang et al.   PLoS Computational Biology

Genome-Wide Sequencing Reveals Small Nucleolar RNAs Downregulated in Cerebral Cavernous Malformations

(2018) Souvik Kar et al.   CELLULAR AND MOLECULAR NEUROBIOLOGY

LncRNA SNHG1 regulates the differentiation of Treg cells and affects the immune escape of breast cancer via regulating miR-448/IDO

(2018) Xinhong Pei et al.   INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES

Transcriptional Profiling of Age-Associated Gene Expression Changes in Human Circulatory CD1c+ Myeloid Dendritic Cell Subset

(2018) Farah Rahmatpanah et al.   JOURNALS OF GERONTOLOGY SERIES A-BIOLOGICAL SCIENCES AND MEDICAL SCIENCES

Comparing fixed sampling with minimizer sampling when using k-mer indexes to find maximal exact matches

(2018) Meznah Almutairy et al.   PLoS One

MALAT1 is a prognostic factor in glioblastoma multiforme and induces chemoresistance to temozolomide through suppressing miR-203 and promoting thymidylate synthase expression

(2017) Wei Chen et al.   Oncotarget

Mammalian ncRNA-disease repository: a global view of ncRNA-mediated disease network

(2013) Y Wang et al.   Cell Death & Disease

Non-coding RNAs in human disease

(2011) Manel Esteller   NATURE REVIEWS GENETICS

Small nucleolar RNA signatures as biomarkers for non-small-cell lung cancer

(2010) Jipei Liao et al.   Molecular Cancer

A Singular Value Thresholding Algorithm for Matrix Completion

(2010) Jian-Feng Cai et al.   SIAM JOURNAL ON OPTIMIZATION

Exact Matrix Completion via Convex Optimization

(2009) Emmanuel J. Candès et al.   FOUNDATIONS OF COMPUTATIONAL MATHEMATICS