Addressing IGHV Gene Structural Diversity Enhances Immunoglobulin Repertoire Analysis: Lessons From Rhesus Macaque
Published 2022 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Addressing IGHV Gene Structural Diversity Enhances Immunoglobulin Repertoire Analysis: Lessons From Rhesus Macaque
Authors
Keywords
-
Journal
Frontiers in Immunology
Volume 13, Issue -, Pages -
Publisher
Frontiers Media SA
Online
2022-03-30
DOI
10.3389/fimmu.2022.818440
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- VDJ Gene Usage in IgM Repertoires of Rhesus and Cynomolgus Macaques
- (2022) Mark Chernyshev et al. Frontiers in Immunology
- Rhesus and cynomolgus macaque immunoglobulin heavy-chain genotyping yields comprehensive databases of germline VDJ alleles
- (2021) Néstor Vázquez Bernat et al. IMMUNITY
- Diversity in immunogenomics: the value and the challenge
- (2021) Kerui Peng et al. NATURE METHODS
- Structurally related but genetically unrelated antibody lineages converge on an immunodominant HIV-1 Env neutralizing determinant following trimer immunization
- (2021) Safia S. Aljedani et al. PLoS Pathogens
- Polymorphisms in human immunoglobulin heavy chain variable genes and their upstream regions
- (2020) Ivana Mikocziova et al. NUCLEIC ACIDS RESEARCH
- Mapping the immunogenic landscape of near-native HIV-1 envelope trimers in non-human primates
- (2020) Christopher A. Cottrell et al. PLoS Pathogens
- Recapitulation of HIV-1 Env-antibody coevolution in macaques leading to neutralization breadth
- (2020) Ryan S. Roark et al. SCIENCE
- Mosaic deletion patterns of the human antibody heavy chain gene locus shown by Bayesian haplotyping
- (2019) Moriah Gidoni et al. Nature Communications
- Slow Delivery Immunization Enhances HIV Neutralizing Antibody and Germinal Center Responses via Modulation of Immunodominance
- (2019) Kimberly M. Cirelli et al. CELL
- Antibody Lineages with Vaccine-Induced Antigen-Binding Hotspots Develop Broad HIV Neutralization
- (2019) Rui Kong et al. CELL
- Per-sample immunoglobulin germline inference from B cell receptor deep sequencing data
- (2019) Duncan K. Ralph et al. PLoS Computational Biology
- High-Quality Library Preparation for NGS-Based Immunoglobulin Germline Gene Inference and Repertoire Expression Analysis
- (2019) Néstor Vázquez Bernat et al. Frontiers in Immunology
- A comparison of immunoglobulin IGHV , IGHD and IGHJ genes in wild‐derived and classical inbred mouse strains
- (2019) Corey T Watson et al. IMMUNOLOGY AND CELL BIOLOGY
- Extensive dissemination and intraclonal maturation of HIV Env vaccine-induced B cell responses
- (2019) Ganesh E. Phad et al. JOURNAL OF EXPERIMENTAL MEDICINE
- Long-read assembly of the Chinese rhesus macaque genome and identification of ape-specific structural variants
- (2019) Yaoxi He et al. Nature Communications
- Particulate Array of Well-Ordered HIV Clade C Env Trimers Elicits Neutralizing Antibodies that Display a Unique V2 Cap Approach
- (2017) Paola Martinez-Murillo et al. IMMUNITY
- Evolution of B cell analysis and Env trimer redesign
- (2017) Gunilla B. Karlsson Hedestam et al. IMMUNOLOGICAL REVIEWS
- Parallel antibody germline gene and haplotype analyses support the validity of immunoglobulin germline gene inference and discovery
- (2017) Ufuk Kirik et al. MOLECULAR IMMUNOLOGY
- The Individual and Population Genetics of Antibody Immunity
- (2017) Corey T. Watson et al. TRENDS IN IMMUNOLOGY
- Structure and Diversity of the Rhesus Macaque Immunoglobulin Loci through Multiple De Novo Genome Assemblies
- (2017) Akshaya Ramesh et al. Frontiers in Immunology
- Production of individualized V gene databases reveals high levels of immunoglobulin genetic diversity
- (2016) Martin M. Corcoran et al. Nature Communications
- ggtree: anrpackage for visualization and annotation of phylogenetic trees with their covariates and other associated data
- (2016) Guangchuang Yu et al. Methods in Ecology and Evolution
- Diverse Antibody Genetic and Recognition Properties Revealed following HIV-1 Envelope Glycoprotein Immunization
- (2015) Ganesh E. Phad et al. JOURNAL OF IMMUNOLOGY
- The mouse antibody heavy chain repertoire is germline-focused and highly variable between inbred strains
- (2015) Andrew M. Collins et al. PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- Automated analysis of high-throughput B-cell sequencing data reveals a high frequency of novel immunoglobulin V gene segment alleles
- (2015) Daniel Gadala-Maria et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Analysis of immunoglobulin transcripts and hypermutation following SHIVAD8 infection and protein-plus-adjuvant immunization
- (2015) Joseph R. Francica et al. Nature Communications
- A new rhesus macaque assembly and annotation for next-generation sequencing analyses
- (2014) Aleksey V Zimin et al. Biology Direct
- Complete Haplotype Sequence of the Human Immunoglobulin Heavy-Chain Variable, Diversity, and Joining Genes and Characterization of Allelic and Copy-Number Variation
- (2013) Corey T. Watson et al. AMERICAN JOURNAL OF HUMAN GENETICS
- High-Resolution Definition of Vaccine-Elicited B Cell Responses Against the HIV Primary Receptor Binding Site
- (2012) C. Sundling et al. Science Translational Medicine
- The Inference of Phased Haplotypes for the Immunoglobulin H Chain V Region Gene Loci by Analysis of VDJ Gene Rearrangements
- (2011) M. J. Kidd et al. JOURNAL OF IMMUNOLOGY
- Individual Variation in the Germline Ig Gene Repertoire Inferred from Variable Region Gene Rearrangements
- (2010) S. D. Boyd et al. JOURNAL OF IMMUNOLOGY
- FastTree: Computing Large Minimum Evolution Trees with Profiles instead of a Distance Matrix
- (2009) M. N. Price et al. MOLECULAR BIOLOGY AND EVOLUTION
- IMGT(R), the international ImMunoGeneTics information system(R)
- (2008) M.-P. Lefranc et al. NUCLEIC ACIDS RESEARCH
Discover Peeref hubs
Discuss science. Find collaborators. Network.
Join a conversationCreate your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create Now