Integrative NMR for biomolecular research

Probabilistic validation of protein NMR chemical shift assignments

(2016) Hesam Dashti et al.   JOURNAL OF BIOMOLECULAR NMR

The second round of Critical Assessment of Automated Structure Determination of Proteins by NMR: CASD-NMR-2013

(2015) Antonio Rosato et al.   JOURNAL OF BIOMOLECULAR NMR

CONNJUR R: an annotation strategy for fostering reproducibility in bio-NMR—protein spectral assignment

(2015) Matthew Fenwick et al.   JOURNAL OF BIOMOLECULAR NMR

NMRFAM-SDF: a protein structure determination framework

(2015) Hesam Dashti et al.   JOURNAL OF BIOMOLECULAR NMR

NMRFAM-SPARKY: enhanced software for biomolecular NMR spectroscopy

(2014) Woonghee Lee et al.   BIOINFORMATICS

PONDEROSA-C/S: client–server based software package for automated protein 3D structure determination

(2014) Woonghee Lee et al.   JOURNAL OF BIOMOLECULAR NMR

Protein backbone and sidechain torsion angles predicted from NMR chemical shifts using artificial neural networks

(2013) Yang Shen et al.   JOURNAL OF BIOMOLECULAR NMR

Automated and assisted RNA resonance assignment using NMR chemical shift statistics

(2013) Thomas Aeschbacher et al.   NUCLEIC ACIDS RESEARCH

Temperature-dependent conformational change affecting Tyr11 and sweetness loops of brazzein

(2013) Claudia C. Cornilescu et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

PACSY, a relational database management system for protein structure and chemical shift analysis

(2012) Woonghee Lee et al.   JOURNAL OF BIOMOLECULAR NMR

RNA-PAIRS: RNA probabilistic assignment of imino resonance shifts

(2012) Arash Bahrami et al.   JOURNAL OF BIOMOLECULAR NMR

WeNMR: Structural Biology on the Grid

(2012) Tsjerk A. Wassenaar et al.   Journal of Grid Computing

Principles for designing ideal protein structures

(2012) Nobuyasu Koga et al.   NATURE

Determination of solution structures of proteins up to 40 kDa using CS-Rosetta with sparse NMR data from deuterated samples

(2012) O. F. Lange et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

PONDEROSA, an automated 3D-NOESY peak picking program, enables automated protein structure determination

(2011) Woonghee Lee et al.   BIOINFORMATICS

ncIDP-assign: a SPARKY extension for the effective NMR assignment of intrinsically disordered proteins

(2011) K. Tamiola et al.   BIOINFORMATICS

PINE-SPARKY: graphical interface for evaluating automated probabilistic peak assignments in protein NMR spectroscopy

(2009) W. Lee et al.   BIOINFORMATICS

Probabilistic Interaction Network of Evidence Algorithm and its Application to Complete Labeling of Peak Lists from Protein NMR Spectroscopy

(2009) Arash Bahrami et al.   PLoS Computational Biology

Structural proteomics by NMR spectroscopy

(2008) Joon Shin et al.   Expert Review of Proteomics

Consistent blind protein structure generation from NMR chemical shift data

(2008) Y. Shen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA