Global dynamics of microbial communities emerge from local interaction rules

Short-range quorum sensing controls horizontal gene transfer at micron scale in bacterial communities

(2021) Jordi van Gestel et al.   Nature Communications

Towards a General Understanding of Bacterial Interactions

(2020) Zhijie Zhang et al.   TRENDS IN MICROBIOLOGY

Bacteria and archaea on Earth and their abundance in biofilms

(2019) Hans-Curt Flemming et al.   NATURE REVIEWS MICROBIOLOGY

Metabolic activity affects the response of single cells to a nutrient switch in structured populations

(2019) Alma Dal Co et al.   Journal of the Royal Society Interface

Circuit Design Features of a Stable Two-Cell System

(2018) Xu Zhou et al.   CELL

How spatial structure and neighbor uncertainty promote mutualists and weaken black queen effects

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Spatial determinants of quorum signaling in aPseudomonas aeruginosainfection model

(2018) Sophie E. Darch et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Spatially Correlated Gene Expression in Bacterial Groups: The Role of Lineage History, Spatial Gradients, and Cell-Cell Interactions

(2018) Simon van Vliet et al.   Cell Systems

Emergence of three-dimensional order and structure in growing biofilms

(2018) Raimo Hartmann et al.   Nature Physics

Metabolic Interactions in the Tumor Microenvironment

(2017) Costas A. Lyssiotis et al.   TRENDS IN CELL BIOLOGY

Competition and coexistence between a syntrophic consortium and a metabolic generalist, and its effect on productivity

(2016) Simon M. Stump et al.   JOURNAL OF THEORETICAL BIOLOGY

Biofilms: an emergent form of bacterial life

(2016) Hans-Curt Flemming et al.   NATURE REVIEWS MICROBIOLOGY

Spatial structure, cooperation and competition in biofilms

(2016) Carey D. Nadell et al.   NATURE REVIEWS MICROBIOLOGY

Single cell activity reveals direct electron transfer in methanotrophic consortia

(2015) Shawn E. McGlynn et al.   NATURE

Microscale sulfur cycling in the phototrophic pink berry consortia of the Sippewissett Salt Marsh

(2014) Elizabeth G. Wilbanks et al.   ENVIRONMENTAL MICROBIOLOGY

Genetic drift opposes mutualism during spatial population expansion

(2014) M. J. I. Muller et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Real-time monitoring of quorum sensing in 3D-printed bacterial aggregates using scanning electrochemical microscopy

(2014) Jodi L. Connell et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Solutions to the Public Goods Dilemma in Bacterial Biofilms

(2013) Knut Drescher et al.   CURRENT BIOLOGY

Spatial self-organization favors heterotypic cooperation over cheating

(2013) Babak Momeni et al.   eLife

Invasion and expansion of cooperators in lattice populations: Prisoner's dilemma vs. snowdrift games

(2010) Feng Fu et al.   JOURNAL OF THEORETICAL BIOLOGY

Evolutionary dynamics on graphs: Efficient method for weak selection

(2009) Feng Fu et al.   PHYSICAL REVIEW E

Physiological heterogeneity in biofilms

(2008) Philip S. Stewart et al.   NATURE REVIEWS MICROBIOLOGY

A simple and general explanation for the evolution of altruism

(2008) J. A Fletcher et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

The Microbial Engines That Drive Earth's Biogeochemical Cycles

(2008) P. G. Falkowski et al.   SCIENCE