Moving towards improved surveillance and earlier diagnosis of aquatic pathogens: From traditional methods to emerging technologies

Gnotobiotic rainbow trout (Oncorhynchus mykiss) model reveals endogenous bacteria that protect against Flavobacterium columnare infection

(2021) David Pérez-Pascual et al.   PLoS Pathogens

Circadian dynamics of the teleost skin immune-microbiome interface

(2021) Amy R. Ellison et al.   Microbiome

Rapid visualization in the specific detection of Flavobacterium columnare, a causative agent of freshwater columnaris using a novel recombinase polymerase amplification (RPA) combined with lateral flow dipstick (LFD) assay

(2020) Mahmoud Mabrok et al.   AQUACULTURE

Comparative transcriptomics reveal conserved impacts of rearing density on immune response of two important aquaculture species

(2020) Amy R. Ellison et al.   FISH & SHELLFISH IMMUNOLOGY

Multiplex droplet digital PCR assay for detection of Flavobacterium psychrophilum and Yersinia ruckeri in Norwegian aquaculture

(2020) Anna S. Lewin et al.   JOURNAL OF MICROBIOLOGICAL METHODS

Covid-19: Government plans to spend £100bn on expanding testing to 10 million a day

(2020) Gareth Iacobucci et al.   BMJ-British Medical Journal

Mycobacteriosis in Aquatic Invertebrates: A Review of Its Emergence

(2020) Nadav Davidovich et al.   Microorganisms

Density-dependent changes in neophobia and stress-coping styles in the world's oldest farmed fish

(2019) T. Champneys et al.   Royal Society Open Science

A review of unmanned vehicles for the detection and monitoring of marine fauna

(2019) Ursula K. Verfuss et al.   MARINE POLLUTION BULLETIN

A neglected fish stressor: mechanical disturbance during transportation impacts susceptibility to disease in a globally important ornamental fish

(2019) N Masud et al.   DISEASES OF AQUATIC ORGANISMS

Reliability of marine faunal detections in drone-based monitoring

(2019) Andrew P. Colefax et al.   OCEAN & COASTAL MANAGEMENT

Metagenomics for broad and improved parasite detection: a proof-of-concept study using swine faecal samples

(2019) Claudia Wylezich et al.   INTERNATIONAL JOURNAL FOR PARASITOLOGY

A systematic review of FTA cards® as a tool for viral RNA preservation in fieldwork: Are they safe and effective?

(2019) Jaime A. Cardona-Ospina et al.   PREVENTIVE VETERINARY MEDICINE

Can Environmental RNA Revolutionize Biodiversity Science?

(2019) Melania E. Cristescu   TRENDS IN ECOLOGY & EVOLUTION

Spatial patterns of arctic sponge ground fauna and demersal fish are detectable in autonomous underwater vehicle (AUV) imagery

(2019) H.K. Meyer et al.   DEEP-SEA RESEARCH PART I-OCEANOGRAPHIC RESEARCH PAPERS

Integrating UAV Technology in an Ecological Monitoring System for Community Wildlife Management Areas in Tanzania

(2019) Lazaro J. Mangewa et al.   Sustainability

Use of an unmanned aerial vehicle (drone) to survey Nile crocodile populations: A case study at Lake Nyamithi, Ndumo game reserve, South Africa

(2018) Mohamed A. Ezat et al.   BIOLOGICAL CONSERVATION

Species-specific Real Time-PCR primers/probe systems to identify fish parasites of the genera Anisakis , Pseudoterranova and Hysterothylacium (Nematoda: Ascaridoidea)

(2018) Michela Paoletti et al.   FISHERIES RESEARCH

Characterization of the histologic appearance of normal gill tissue using special staining techniques

(2018) Stephen A. Smith et al.   JOURNAL OF VETERINARY DIAGNOSTIC INVESTIGATION

Needle in a haystack? A comparison of eDNA metabarcoding and targeted qPCR for detection of the great crested newt (Triturus cristatus )

(2018) Lynsey R. Harper et al.   Ecology and Evolution

Smell of Infection: A Novel, Noninvasive Method for Detection of Fish Excretory-Secretory Proteins

(2018) Rebecca J. Pawluk et al.   JOURNAL OF PROTEOME RESEARCH

Integrating gut microbiota immaturity and disease-discriminatory taxa to diagnose the initiation and severity of shrimp disease

(2017) Jinbo Xiong et al.   ENVIRONMENTAL MICROBIOLOGY

Interplay between the gut microbiota and immune responses of ayu ( Plecoglossus altivelis ) during Vibrio anguillarum infection

(2017) Li Nie et al.   FISH & SHELLFISH IMMUNOLOGY

SYBR safeTM efficiently replaces ethidium bromide in Aspergillus fumigatus gene disruption

(2017) H.M.S. Canela et al.   GENETICS AND MOLECULAR RESEARCH

Lice-hunting underwater drone protects salmon [News]

(2017) Michael Dumiak   IEEE SPECTRUM

Serology in Finfish for Diagnosis, Surveillance, and Research: A Systematic Review

(2017) Diana Jaramillo et al.   JOURNAL OF AQUATIC ANIMAL HEALTH

Stress and welfare in ornamental fishes: what can be learned from aquaculture?

(2017) C. H. Stevens et al.   JOURNAL OF FISH BIOLOGY

Water sampling for environmental DNA surveys by using an unmanned aerial vehicle

(2017) Hideyuki Doi et al.   LIMNOLOGY AND OCEANOGRAPHY-METHODS

Changes in deep reef benthic community composition across a latitudinal and environmental gradient in temperate Eastern Australia

(2017) LC James et al.   MARINE ECOLOGY PROGRESS SERIES

Global change, parasite transmission and disease control: lessons from ecology

(2017) Joanne Cable et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Annual time-series analysis of aqueous eDNA reveals ecologically relevant dynamics of lake ecosystem biodiversity

(2017) Iliana Bista et al.   Nature Communications

New diagnostic tests: more harm than good

(2017) Bjørn Hofmann et al.   BMJ-British Medical Journal

New Paradigms to Help Solve the Global Aquaculture Disease Crisis

(2017) Grant D. Stentiford et al.   PLoS Pathogens

Detection of Flavescence dorée Grapevine Disease Using Unmanned Aerial Vehicle (UAV) Multispectral Imagery

(2017) Johanna Albetis et al.   Remote Sensing

New diagnostic tests: more harm than good

(2017) Bjørn Hofmann et al.   BMJ-British Medical Journal

A Basic Guide to Real Time PCR in Microbial Diagnostics: Definitions, Parameters, and Everything

(2017) Petr Kralik et al.   Frontiers in Microbiology

Changes in deep reef benthic community composition across a latitudinal and environmental gradient in temperate Eastern Australia

(2017) LC James et al.   MARINE ECOLOGY PROGRESS SERIES

Nutritional requirements of freshwater ornamental fish: a review

(2017) Yohana Velasco-Santamaría et al.   Revista MVZ Cordoba

Recombinase Polymerase Amplification for Diagnostic Applications

(2016) R. K. Daher et al.   CLINICAL CHEMISTRY

Contribution of Next-Generation Sequencing to Aquatic and Fish Virology

(2016) Andriniaina Andy Nkili-Meyong et al.   INTERVIROLOGY

Using Deep Learning for Image-Based Plant Disease Detection

(2016) Sharada P. Mohanty et al.   Frontiers in Plant Science

Moving from Histopathology to Molecular Tools in the Diagnosis of Molluscs Diseases of Concern under EU Legislation

(2016) Raquel Aranguren et al.   Frontiers in Physiology

Deviations in human gut microbiota: a novel diagnostic test for determining dysbiosis in patients with IBS or IBD

(2015) C. Casén et al.   ALIMENTARY PHARMACOLOGY & THERAPEUTICS

Fish environmental DNA is more concentrated in aquatic sediments than surface water

(2015) Cameron R. Turner et al.   BIOLOGICAL CONSERVATION

Environmental DNA – An emerging tool in conservation for monitoring past and present biodiversity

(2015) Philip Francis Thomsen et al.   BIOLOGICAL CONSERVATION

Environmental genes and genomes: understanding the differences and challenges in the approaches and software for their analyses

(2015) Marie Lisandra Zepeda Mendoza et al.   BRIEFINGS IN BIOINFORMATICS

Fishing in the Water: Effect of Sampled Water Volume on Environmental DNA-Based Detection of Macroinvertebrates

(2015) Elvira Mächler et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Development of a bacterial challenge test for gnotobiotic Nile tilapia Oreochromis niloticus larvae

(2014) ML Situmorang et al.   DISEASES OF AQUATIC ORGANISMS

Isothermal amplified detection of DNA and RNA

(2014) Lei Yan et al.   Molecular BioSystems

Evaluation of colorimetric detection methods for Shigella, Salmonella, and Vibrio cholerae by loop-mediated isothermal amplification

(2013) Kevin W. Soli et al.   DIAGNOSTIC MICROBIOLOGY AND INFECTIOUS DISEASE

Syncytial hepatitis of farmed tilapia,Oreochromis niloticus(L.): a case report

(2013) H W Ferguson et al.   JOURNAL OF FISH DISEASES

Risk-based methods for fish and terrestrial animal disease surveillance

(2013) Birgit Oidtmann et al.   PREVENTIVE VETERINARY MEDICINE

The impact of the water moulds Saprolegnia diclina and Saprolegnia parasitica on natural ecosystems and the aquaculture industry

(2013) Albert Hendrik van den Berg et al.   Fungal Biology Reviews

Digital PCR hits its stride

(2012) Monya Baker   NATURE METHODS

Fisheries refugia: a novel approach to integrating fisheries and habitat management in the context of small-scale fishing pressure

(2012) Christopher J. Paterson et al.   OCEAN & COASTAL MANAGEMENT

Molecular tools for the detection and identification of Ichthyobodo spp. (Kinetoplastida), important fish parasites

(2012) Trond E. Isaksen et al.   PARASITOLOGY INTERNATIONAL

Microbial Diversity and Potential Pathogens in Ornamental Fish Aquarium Water

(2012) Katherine F. Smith et al.   PLoS One

The status of routine fishery data collection in Southeast Asia, central America, the South Pacific, and West Africa, with special reference to small-scale fisheries

(2011) G. J. de Graaf et al.   ICES JOURNAL OF MARINE SCIENCE

Evaluation of common angling-induced sources of epithelial damage for popular freshwater sport fish using fluorescein

(2010) Alison H. Colotelo et al.   FISHERIES RESEARCH

Multi-centre testing and validation of current protocols for the identification of Gyrodactylus salaris (Monogenea)

(2010) A.P. Shinn et al.   INTERNATIONAL JOURNAL FOR PARASITOLOGY

Rapid and sensitive detection of Macrobrachium rosenbergii nodavirus in giant freshwater prawns by reverse transcription loop-mediated isothermal amplification combined with a lateral flow dipstick

(2010) Teeranart Puthawibool et al.   MOLECULAR AND CELLULAR PROBES

Shrimp Taura syndrome virus detection by reverse transcription loop-mediated isothermal amplification combined with a lateral flow dipstick

(2008) Wansika Kiatpathomchai et al.   JOURNAL OF VIROLOGICAL METHODS

GyroDb: gyrodactylid monogeneans on the web

(2008) Philip D. Harris et al.   TRENDS IN PARASITOLOGY