A review of the current and emerging detection methods of marine harmful microalgae

Development of fluorescence in situ hybridization (FISH) probes to detect and enumerate Gambierdiscus species

(2021) Kathleen J. Pitz et al.   HARMFUL ALGAE

Rapid and sensitive detection of Karlodinium veneficum by a novel double-nick rolling circle amplification

(2021) Fuguo Liu et al.   ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH

Monitoring pharmaceuticals in the aquatic environment using enzyme-linked immunosorbent assay (ELISA)—a practical overview

(2020) Guilaine Jaria et al.   ANALYTICAL AND BIOANALYTICAL CHEMISTRY

Electrochemical immunosensor functionalized with nanobodies for the detection of the toxic microalgae Alexandrium minutum using glassy carbon electrode modified with gold nanoparticles

(2020) Sandra Oloketuyi et al.   BIOSENSORS & BIOELECTRONICS

Recombinase polymerase amplification combined with lateral-flow dipstick for rapid detection of Prorocentrum minimum

(2020) Mengqi Fu et al.   JOURNAL OF APPLIED PHYCOLOGY

Detection of Prorocentrum minimum by hyperbranched rolling circle amplification coupled with lateral flow dipstick

(2020) Fuguo Liu et al.   ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH

Establishment of double probes rolling circle amplification combined with lateral flow dipstick for rapid detection of Chattonella marina

(2020) Yue Qin et al.   HARMFUL ALGAE

Biotic control of harmful algal blooms (HABs): A brief review

(2020) Mili Pal et al.   JOURNAL OF ENVIRONMENTAL MANAGEMENT

Quantification of chlorophyll a, chlorophyll b and pheopigments a in lake sediments through deconvolution of bulk UV–VIS absorption spectra

(2020) Andrea Sanchini et al.   JOURNAL OF PALEOLIMNOLOGY

Determining temporal and spatial distribution of autotrophic picoplankton community composition through HPLC-pigment method and flow cytometry in the central Bohai Sea (China)

(2020) Guowang Yan et al.   MARINE POLLUTION BULLETIN

On the use of chemotaxonomy, a phytoplankton identification and quantification method based on pigment for quick surveys of subtropical reservoirs

(2020) Xiaoqing Yu et al.   ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH

The 5S rRNA genes in Alexandrium: their use as a FISH chromosomal marker in studies of the diversity, cell cycle and sexuality of dinoflagellates

(2020) Alfredo de Bustos et al.   HARMFUL ALGAE

Development and application of a real-time PCR assay for the sensitive detection of diarrheic toxin producer Prorocentrum lima

(2020) Mohamed Barkallah et al.   JOURNAL OF MICROBIOLOGICAL METHODS

Harmful algal blooms (red tide): a review of causes, impacts and approaches to monitoring and prediction

(2019) E. Zohdi et al.   International Journal of Environmental Science and Technology

Exponential rolling circle amplification coupled with lateral flow dipstick strips as a rapid and sensitive method for the field detection of Karlodinium veneficum

(2019) Fu Guo Liu et al.   JOURNAL OF APPLIED PHYCOLOGY

Colorimetric DNA-based assay for the specific detection and quantification of Ostreopsis cf. ovata and Ostreopsis cf. siamensis in the marine environment

(2019) Anna Toldrà et al.   HARMFUL ALGAE

Development of a multiplex polymerase chain reaction assay for the parallel detection of harmful algal bloom-forming species distributed along the Chinese coast

(2019) Yan-Jie Sun et al.   HARMFUL ALGAE

Rapid and sensitive detection method for Karlodinium veneficum by recombinase polymerase amplification coupled with lateral flow dipstick

(2019) Mengqi Fu et al.   HARMFUL ALGAE

Establishment and application of hyperbranched rolling circle amplification coupled with lateral flow dipstick for the sensitive detection of Karenia mikimotoi

(2019) Chunyun Zhang et al.   HARMFUL ALGAE

Harmful algae at the complex nexus of eutrophication and climate change

(2019) Patricia M. Glibert   HARMFUL ALGAE

Diatom red tide significantly drive the changes of microbiome in mariculture ecosystem

(2019) Fulin Sun et al.   AQUACULTURE

Development of loop-mediated isothermal amplification combined with a chromatographic lateral-flow dipstick for rapid detection of Chattonella marina

(2019) Yue Qin et al.   HARMFUL ALGAE

Rapid in situ measurements of algal cell concentrations using an artificial neural network and single-excitation fluorescence spectrometry

(2019) Jing-Yan Liu et al.   Algal Research-Biomass Biofuels and Bioproducts

Integration of the nuclease protection assay with sandwich hybridization (NPA-SH) for sensitive detection of Heterocapsa triquetra

(2018) Mirye Park et al.   ACTA OCEANOLOGICA SINICA

Understanding the Factors Affecting the Analytical Performance of Sandwich-hybridization Genosensors on Gold Electrodes

(2018) Rebeca Miranda-Castro et al.   ELECTROANALYSIS

What are the main environmental factors driving the development of the neurotoxic dinoflagellate Vulcanodinium rugosum in a Mediterranean ecosystem (Ingril lagoon, France)?

(2018) Eric Abadie et al.   HARMFUL ALGAE

On the Simultaneous Identification and Quantification of Microalgae Populations Based on Fluorometric Techniques

(2018) Natalia S. Gsponer et al.   PHOTOCHEMISTRY AND PHOTOBIOLOGY

Detection and quantification of the toxic marine microalgae Karlodinium veneficum and Karlodinium armiger using recombinase polymerase amplification and enzyme-linked oligonucleotide assay

(2018) Anna Toldrà et al.   ANALYTICA CHIMICA ACTA

Spectral Characterization of Eight Marine Phytoplankton Phyla and Assessing a Pigment-Based Taxonomic Discriminant Analysis for the in Situ Classification of Phytoplankton Blooms

(2018) Silvia E. Zieger et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Rapid detection of cyanobacteria by recombinase polymerase amplification combined with lateral flow strips

(2018) Jingjing Li et al.   Water Science and Technology-Water Supply

A novel method for cell counting of Microcystis colonies in water resources using a digital imaging flow cytometer and microscope

(2018) Jungsu Park et al.   Environmental Engineering Research

Rapid and sensitive detection of Amphidinium carterae by loop-mediated isothermal amplification combined with a chromatographic lateral-flow dipstick

(2018) Liang Wang et al.   MOLECULAR AND CELLULAR PROBES

Application of hyper-branched rolling circle amplification (HRCA) and HRCA-based strip test for the detection of Chattonella marina

(2017) Xiaoli Nie et al.   ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH

Sandwich hybridization probes for the detection of Pseudo-nitzschia (Bacillariophyceae) species: An update to existing probes and a description of new probes

(2017) Holly A. Bowers et al.   HARMFUL ALGAE

Development of a qPCR assay for tracking the ecological niches of genetic sub-populations within Pseudo-nitzschia pungens (Bacillariophyceae)

(2017) Jin Ho Kim et al.   HARMFUL ALGAE

The development of loop-mediated isothermal amplification combined with lateral flow dipstick for detection of Karlodinium veneficum

(2017) Hai-Long Huang et al.   HARMFUL ALGAE

Detection and quantification of the toxic microalgae Karenia brevis using lab on a chip mRNA sequence-based amplification

(2017) Christos-Moritz Loukas et al.   JOURNAL OF MICROBIOLOGICAL METHODS

DNA amplification in the field: move over PCR, here comes LAMP

(2017) Patricia L. M. Lee   Molecular Ecology Resources

Assessment of imaging-in-flow system (FlowCAM) for systematic ballast water management

(2017) Leonardo Romero-Martínez et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Easy detection of multiple Alexandrium species using DNA chromatography chip

(2016) Satoshi Nagai et al.   HARMFUL ALGAE

A new era of uveitis: impact of polymerase chain reaction in intraocular inflammatory diseases

(2016) Manabu Mochizuki et al.   JAPANESE JOURNAL OF OPHTHALMOLOGY

Editorial: Eutrophication and hypoxia and their impacts on the ecosystem of the Changjiang Estuary and adjacent coastal environment

(2016) Jing Zhang et al.   JOURNAL OF MARINE SYSTEMS

Phytoplankton IF-FISH: Species-specific labeling of cellular proteins by immunofluorescence (IF) with simultaneous species identification by fluorescence immunohybridization (FISH)

(2016) Megan E. Meek et al.   JOURNAL OF MICROBIOLOGICAL METHODS

Controlling harmful algae blooms using aluminum-modified clay

(2016) Yang Liu et al.   MARINE POLLUTION BULLETIN

Electrochemical RNA genosensors for toxic algal species: enhancing selectivity and sensitivity

(2016) Jahir Orozco et al.   TALANTA

Vertical distribution of buoyant Microcystis blooms in a Lagrangian particle tracking model for short-term forecasts in Lake Erie

(2016) M. D. Rowe et al.   JOURNAL OF GEOPHYSICAL RESEARCH-OCEANS

A netlike rolling circle nucleic acid amplification technique

(2015) Xiaoli Zhu et al.   ANALYST

Mapping the Distribution of Cysts from the Toxic Dinoflagellate Cochlodinium polykrikoides in Bloom-Prone Estuaries by a Novel FluorescenceIn SituHybridization Assay

(2015) Theresa K. Hattenrath-Lehmann et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Employing a socio-ecological systems approach to engage harmful algal bloom stakeholders

(2015) Elizabeth R. Van Dolah et al.   AQUATIC ECOLOGY

Advances in isothermal amplification: novel strategies inspired by biological processes

(2015) Jia Li et al.   BIOSENSORS & BIOELECTRONICS

Detection of the dinoflagellate, Cochlodinium polykrikoides, that forms algal blooms using sandwich hybridization integrated with nuclease protection assay

(2015) Sung-Suk Suh et al.   BIOTECHNOLOGY LETTERS

Re-purposing bridging flocculation for on-site, rapid, qualitative DNA detection in resource-poor settings

(2015) E. J. H. Wee et al.   CHEMICAL COMMUNICATIONS

Evolution of the MIDTAL microarray: the adaption and testing of oligonucleotide 18S and 28S rDNA probes and evaluation of subsequent microarray generations with Prymnesium spp. cultures and field samples

(2015) Gary R. McCoy et al.   ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH

Development of a multiplex real-time qPCR assay for simultaneous enumeration of up to four marine toxic bloom-forming microalgal species

(2015) Lisa K. Eckford-Soper et al.   HARMFUL ALGAE

Harmful algal blooms and climate change: Learning from the past and present to forecast the future

(2015) Mark L. Wells et al.   HARMFUL ALGAE

Hyperbranched rolling circle amplification as a novel method for rapid and sensitive detection of Amphidinium carterae

(2015) Guofu Chen et al.   HARMFUL ALGAE

Loop-mediated isothermal amplification (LAMP): principle, features, and future prospects

(2015) Tsugunori Notomi et al.   JOURNAL OF MICROBIOLOGY

Marine harmful algal blooms, human health and wellbeing: challenges and opportunities in the 21st century

(2015) Elisa Berdalet et al.   JOURNAL OF THE MARINE BIOLOGICAL ASSOCIATION OF THE UNITED KINGDOM

Sensitive and rapid detection of microcystin synthetase E Gene (mcyE) by loop-mediated isothermal amplification: A new assay for detecting the potential microcystin-producing Microcystis in the aquatic ecosystem

(2014) Peng Zhu et al.   HARMFUL ALGAE

Recombinase polymerase amplification combined with a lateral flow dipstick for discriminating between infectious Penaeus stylirostris densovirus and virus-related sequences in shrimp genome

(2014) Wansadaj Jaroenram et al.   JOURNAL OF VIROLOGICAL METHODS

Dynamics of oxygen depletion in the nearshore of a coastal embayment of the southern Benguela upwelling system

(2014) Grant C. Pitcher et al.   JOURNAL OF GEOPHYSICAL RESEARCH-OCEANS

Quantification of the Toxic Dinoflagellate Ostreopsis spp. by qPCR Assay in Marine Aerosol

(2013) Silvia Casabianca et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

A rapid and sensitive method for field detection of Prorocentrum donghaiense using reverse transcription-coupled loop-mediated isothermal amplification

(2013) Guofu Chen et al.   HARMFUL ALGAE

Conventional sampling methods severely underestimate phytoplankton species richness

(2013) Tamara Rodríguez-Ramos et al.   JOURNAL OF PLANKTON RESEARCH

Quantitative PCR Method for Enumeration of Cells of Cryptic Species of the Toxic Marine Dinoflagellate Ostreopsis spp. in Coastal Waters of Japan

(2013) Naohito Hariganeya et al.   PLoS One

MIDTAL (Microarrays for the Detection of Toxic Algae)

(2013) LINDA K. MEDLIN et al.   Phytotaxa

Algae (Microcystis and Scenedesmus) absorption spectra and its application on Chlorophyll a retrieval

(2013) Di Wu et al.   Frontiers of Earth Science

Application of rRNA probes and fluorescence in situ hybridization for rapid detection of the toxic dinoflagellate Alexandrium minutum

(2012) Xianghai Tang et al.   CHINESE JOURNAL OF OCEANOLOGY AND LIMNOLOGY

Development of a rapid detection and quantification method of Karenia mikimotoi by real-time quantitative PCR

(2012) Jian Yuan et al.   HARMFUL ALGAE

Recombinase Polymerase Amplification Assay for Rapid Detection of Francisella tularensis

(2012) M. Euler et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Specific detection of the toxic dinoflagellates Alexandrium tamarense and Alexandrium catenella from single vegetative cells by a loop-mediated isothermal amplification method

(2012) Satoshi Nagai et al.   Marine Genomics

Examination of the Seasonal Dynamics of the Toxic Dinoflagellate Alexandrium catenella at Redondo Beach, California, by Quantitative PCR

(2011) Marie-Ève Garneau et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

DEVELOPMENT OF A MULTIPLEX PCR ASSAY FOR SIMULTANEOUS DETECTION OF SIX ALEXANDRIUM SPECIES (DINOPHYCEAE)1

(2011) Satoshi Nagai   JOURNAL OF PHYCOLOGY

Sensitive and rapid detection of Karenia mikimotoi (Dinophyceae) by loop-mediated isothermal amplification

(2009) Fengying Zhang et al.   HARMFUL ALGAE

Generation of monoclonal antibodies for the specific immunodetection of the toxic dinoflagellate Alexandrium minutum Halim from Spanish waters

(2009) Mónica Carrera et al.   HARMFUL ALGAE

Monoclonal antibody against the surface of Alexandrium minutum used in a whole-cell ELISA

(2008) Fabienne Gas et al.   HARMFUL ALGAE

Novel identification and differentiation of Brucella melitensis, B. abortus, B. suis, B. ovis, B. canis, and B. neotomae suitable for both conventional and real-time PCR systems

(2008) V. Hinić et al.   JOURNAL OF MICROBIOLOGICAL METHODS

Loop-mediated isothermal amplification (LAMP) of gene sequences and simple visual detection of products

(2008) Norihiro Tomita et al.   Nature Protocols

One new method of nucleic acid amplification—Loop-mediated isothermal amplification of DNA

(2008) Xue-en Fang et al.   VIROLOGICA SINICA