Multi-CSAR: a web server for scaffolding contigs using multiple reference genomes
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Title
Multi-CSAR: a web server for scaffolding contigs using multiple reference genomes
Authors
Keywords
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Journal
NUCLEIC ACIDS RESEARCH
Volume -, Issue -, Pages -
Publisher
Oxford University Press (OUP)
Online
2022-04-15
DOI
10.1093/nar/gkac301
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Related references
Note: Only part of the references are listed.- A comprehensive review of scaffolding methods in genome assembly
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- New Approaches for Genome Assembly and Scaffolding
- (2018) Edward S. Rice et al. Annual Review of Animal Biosciences
- Multi-CAR: a tool of contig scaffolding using multiple references
- (2016) Kun-Tze Chen et al. BMC BIOINFORMATICS
- MeDuSa: a multi-draft based scaffolder
- (2015) Emanuele Bosi et al. BIOINFORMATICS
- An Efficient Algorithm for the Contig Ordering Problem under Algebraic Rearrangement Distance
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- Assembly: a resource for assembled genomes at NCBI
- (2015) Paul A. Kitts et al. NUCLEIC ACIDS RESEARCH
- Ragout--a reference-assisted assembly tool for bacterial genomes
- (2014) M. Kolmogorov et al. BIOINFORMATICS
- CAR: contig assembly of prokaryotic draft genomes using rearrangements
- (2014) Chin Lung Lu et al. BMC BIOINFORMATICS
- Next-Generation Sequence Assembly: Four Stages of Data Processing and Computational Challenges
- (2013) Sara El-Metwally et al. PLoS Computational Biology
- SIS: a program to generate draft genome sequence scaffolds for prokaryotes
- (2012) Zanoni Dias et al. BMC BIOINFORMATICS
- Scaffold filling, contig fusion and comparative gene order inference
- (2010) Adriana Munoz et al. BMC BIOINFORMATICS
- Limitations of next-generation genome sequence assembly
- (2010) Can Alkan et al. NATURE METHODS
- Reordering contigs of draft genomes using the Mauve Aligner
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- r2cat: synteny plots and comparative assembly
- (2009) P. Husemann et al. BIOINFORMATICS
- Circos: An information aesthetic for comparative genomics
- (2009) M. Krzywinski et al. GENOME RESEARCH
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