Viv: multiscale visualization of high-resolution multiplexed bioimaging data on the web

OME-NGFF: a next-generation file format for expanding bioimaging data-access strategies

(2021) Josh Moore et al.   NATURE METHODS

The Human Tumor Atlas Network: Charting Tumor Transitions across Space and Time at Single-Cell Resolution

(2020) Orit Rozenblatt-Rosen et al.   CELL

The human body at cellular resolution: the NIH Human Biomolecular Atlas Program

(2019)   NATURE

ImJoy: an open-source computational platform for the deep learning era

(2019) Wei Ouyang et al.   NATURE METHODS

webKnossos: efficient online 3D data annotation for connectomics

(2017) Kevin M Boergens et al.   NATURE METHODS

Tabix: fast retrieval of sequence features from generic TAB-delimited files

(2011) H. Li   BIOINFORMATICS

CATMAID: collaborative annotation toolkit for massive amounts of image data

(2009) S. Saalfeld et al.   BIOINFORMATICS