Whole-genome typing and characterization ofblaVIM19-harbouring ST383Klebsiella pneumoniaeby PFGE, whole-genome mapping and WGS

Acquired metallo-β-lactamases and their genetic association with class 1 integrons and ISCRelements in Gram-negative bacteria

(2015) Wei-Hua Zhao et al.   Future Microbiology

Survey of metallo-β-lactamase-producing Enterobacteriaceae colonizing patients in European ICUs and rehabilitation units, 2008–11

(2015) C. C. Papagiannitsis et al.   JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY

Diversity of Class 1 Integron Gene Cassette Rearrangements Selected under Antibiotic Pressure

(2015) Olivier Barraud et al.   JOURNAL OF BACTERIOLOGY

In SilicoDetection and Typing of Plasmids using PlasmidFinder and Plasmid Multilocus Sequence Typing

(2014) Alessandra Carattoli et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Whole-Genome Mapping: a New Paradigm in Strain-Typing Technology

(2013) J. M. Miller   JOURNAL OF CLINICAL MICROBIOLOGY

The SEED and the Rapid Annotation of microbial genomes using Subsystems Technology (RAST)

(2013) Ross Overbeek et al.   NUCLEIC ACIDS RESEARCH

PathogenFinder - Distinguishing Friend from Foe Using Bacterial Whole Genome Sequence Data

(2013) Salvatore Cosentino et al.   PLoS One

SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing

(2012) Anton Bankevich et al.   JOURNAL OF COMPUTATIONAL BIOLOGY

The Challenges of Antimicrobial Drug Resistance in Greece

(2011) S. Miyakis et al.   CLINICAL INFECTIOUS DISEASES

Molecular characterization of VIM-producing Klebsiella pneumoniae from Scandinavia reveals genetic relatedness with international clonal complexes encoding transferable multidrug resistance

(2011) Ø. Samuelsen et al.   CLINICAL MICROBIOLOGY AND INFECTION

Multiplex PCR for detection of acquired carbapenemase genes

(2011) Laurent Poirel et al.   DIAGNOSTIC MICROBIOLOGY AND INFECTIOUS DISEASE

Self-Transmissibility of the Integrative and Conjugative Element ICEPm1 between Clinical Isolates Requires a Functional Integrase, Relaxase, and Type IV Secretion System

(2011) E. L. Flannery et al.   JOURNAL OF BACTERIOLOGY

ICEberg: a web-based resource for integrative and conjugative elements found in Bacteria

(2011) Dexi Bi et al.   NUCLEIC ACIDS RESEARCH

Molecular Dissection of an Outbreak of Carbapenem-Resistant Enterobacteriaceae Reveals Intergenus KPC Carbapenemase Transmission through a Promiscuous Plasmid

(2011) A. J. Mathers et al.   mBio

RAC: Repository of Antibiotic resistance Cassettes

(2011) G. Tsafnat et al.   Database-The Journal of Biological Databases and Curation

Emergence of Klebsiella pneumoniae of a novel sequence type (ST383) producing VIM-4, KPC-2 and CMY-4 β-lactamases

(2010) Constantinos C. Papagiannitsis et al.   INTERNATIONAL JOURNAL OF ANTIMICROBIAL AGENTS

Recurrent healthcare-associated community-onset infections due to Klebsiella pneumoniae producing VIM-1 metallo- -lactamase

(2010) A. Poulou et al.   JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY

Detection of the new metallo- -lactamase VIM-19 along with KPC-2, CMY-2 and CTX-M-15 in Klebsiella pneumoniae

(2010) S. Pournaras et al.   JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY

Inverse Correlation between Promoter Strength and Excision Activity in Class 1 Integrons

(2010) Thomas Jové et al.   PLoS Genetics

Novel VIM Metallo- -Lactamase Variant from Clinical Isolates of Enterobacteriaceae from Algeria

(2009) F. Robin et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

VIM-19, a Metallo- -Lactamase with Increased Carbapenemase Activity from Escherichia coli and Klebsiella pneumoniae

(2009) J.-M. Rodriguez-Martinez et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Emerging Klebsiella pneumoniae Isolates Coproducing KPC-2 and VIM-1 Carbapenemases

(2009) P. Giakkoupi et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

INTEGRALL: a database and search engine for integrons, integrases and gene cassettes

(2009) A. Moura et al.   BIOINFORMATICS

The pheV Phenylalanine tRNA Gene in Klebsiella pneumoniae Clinical Isolates Is an Integration Hotspot for Possible Niche-Adaptation Genomic Islands

(2009) Nan Chen et al.   CURRENT MICROBIOLOGY

Identification of a Modular Pathogenicity Island That Is Widespread among Urease-Producing Uropathogens and Shares Features with a Diverse Group of Mobile Elements

(2009) E. L. Flannery et al.   INFECTION AND IMMUNITY

Clonal spread of KPC-2 carbapenemase-producing Klebsiella pneumoniae strains in Greece

(2009) Spyros Pournaras et al.   JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY

Outbreak of infections due to KPC-2-producing Klebsiella pneumoniae in a hospital in Crete (Greece)

(2009) H.C. Maltezou et al.   JOURNAL OF INFECTION

The RAST Server: Rapid Annotations using Subsystems Technology

(2008) Ramy K Aziz et al.   BMC GENOMICS