DiMeLo-seq: a long-read, single-molecule method for mapping protein–DNA interactions genome wide
Published 2022 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
DiMeLo-seq: a long-read, single-molecule method for mapping protein–DNA interactions genome wide
Authors
Keywords
-
Journal
NATURE METHODS
Volume -, Issue -, Pages -
Publisher
Springer Science and Business Media LLC
Online
2022-04-09
DOI
10.1038/s41592-022-01475-6
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Complete genomic and epigenetic maps of human centromeres
- (2022) Nicolas Altemose et al. SCIENCE
- Epigenetic patterns in a complete human genome
- (2022) Ariel Gershman et al. SCIENCE
- The complete sequence of a human genome
- (2022) Sergey Nurk et al. SCIENCE
- Identification and characterization of centromeric sequences in Xenopus laevis
- (2021) Owen K. Smith et al. GENOME RESEARCH
- The structure, function and evolution of a complete human chromosome 8
- (2021) Glennis A. Logsdon et al. NATURE
- Targeted nanopore sequencing with Cas9-guided adapter ligation
- (2020) Timothy Gilpatrick et al. NATURE BIOTECHNOLOGY
- Long-range single-molecule mapping of chromatin accessibility in eukaryotes
- (2020) Zohar Shipony et al. NATURE METHODS
- Telomere-to-telomere assembly of a complete human X chromosome
- (2020) Karen H. Miga et al. NATURE
- Single-molecule regulatory architectures captured by chromatin fiber sequencing
- (2020) Andrew B. Stergachis et al. SCIENCE
- Cell cycle dynamics of lamina‐associated DNA
- (2020) Tom van Schaik et al. EMBO REPORTS
- μDamID: A Microfluidic Approach for Joint Imaging and Sequencing of Protein-DNA Interactions in Single Cells
- (2020) Nicolas Altemose et al. Cell Systems
- Molecular Co-occupancy Identifies Transcription Factor Binding Cooperativity In Vivo
- (2020) Can Sönmezer et al. MOLECULAR CELL
- Targeted nanopore sequencing by real-time mapping of raw electrical signal with UNCALLED
- (2020) Sam Kovaka et al. NATURE BIOTECHNOLOGY
- Simultaneous profiling of chromatin accessibility and methylation on human cell lines with nanopore sequencing
- (2020) Isac Lee et al. NATURE METHODS
- Massively multiplex single-molecule oligonucleosome footprinting
- (2020) Nour J Abdulhay et al. eLife
- Single-molecule long-read sequencing reveals the chromatin basis of gene expression
- (2019) Yunhao Wang et al. GENOME RESEARCH
- Improved CUT&RUN chromatin profiling tools
- (2019) Michael P Meers et al. eLife
- Sources of artifact in measurements of 6mA and 4mC abundance in eukaryotic genomic DNA
- (2019) Zach K. O’Brown et al. BMC GENOMICS
- Accurate circular consensus long-read sequencing improves variant detection and assembly of a human genome
- (2019) Aaron M. Wenger et al. NATURE BIOTECHNOLOGY
- Alpha satellite DNA biology: finding function in the recesses of the genome
- (2018) Shannon M. McNulty et al. CHROMOSOME RESEARCH
- Constitutive centromere-associated network contacts confer differential stability on CENP-A nucleosomes in vitro and in the cell
- (2018) Shengya Cao et al. MOLECULAR BIOLOGY OF THE CELL
- MadID, a Versatile Approach to Map Protein-DNA Interactions, Highlights Telomere-Nuclear Envelope Contact Sites in Human Cells
- (2018) Michal Sobecki et al. Cell Reports
- An efficient targeted nuclease strategy for high-resolution mapping of DNA binding sites
- (2017) Peter J Skene et al. eLife
- Genomic variation within alpha satellite DNA influences centromere location on human chromosomes with metastable epialleles
- (2016) Megan E. Aldrup-MacDonald et al. GENOME RESEARCH
- Genome-wide Maps of Nuclear Lamina Interactions in Single Human Cells
- (2015) Jop Kind et al. CELL
- Centromere reference models for human chromosomes X and Y satellite arrays
- (2014) K. H. Miga et al. GENOME RESEARCH
- The quantitative architecture of centromeric chromatin
- (2014) Dani L Bodor et al. eLife
- Mapping Human Epigenomes
- (2013) Chloe M. Rivera et al. CELL
- Constitutive nuclear lamina-genome interactions are highly conserved and associated with A/T-rich sequence
- (2012) W. Meuleman et al. GENOME RESEARCH
- Genome-wide mapping of nucleosome positioning and DNA methylation within individual DNA molecules
- (2012) T. K. Kelly et al. GENOME RESEARCH
- Sequences Associated with Centromere Competency in the Human Genome
- (2012) K. E. Hayden et al. MOLECULAR AND CELLULAR BIOLOGY
- Comprehensive Genome-wide Protein-DNA Interactions Detected at Single-Nucleotide Resolution
- (2011) Ho Sung Rhee et al. CELL
- Open chromatin defined by DNaseI and FAIRE identifies regulatory elements that shape cell-type identity
- (2011) L. Song et al. GENOME RESEARCH
- Novel non-specific DNA adenine methyltransferases
- (2011) Marek Drozdz et al. NUCLEIC ACIDS RESEARCH
- High-resolution genome-wide in vivo footprinting of diverse transcription factors in human cells
- (2010) A. P. Boyle et al. GENOME RESEARCH
- Domain organization of human chromosomes revealed by mapping of nuclear lamina interactions
- (2008) Lars Guelen et al. NATURE
Create your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create NowAsk a Question. Answer a Question.
Quickly pose questions to the entire community. Debate answers and get clarity on the most important issues facing researchers.
Get Started