Functional characterization of the tomato HAIRPLUS gene reveals the implication of the epigenome in the control of glandular trichome formation

A Scanning Electron Micrograph-based Resource for Identification of Loci Involved in Epidermal Development in Tomato: Elucidation of a New Function for the Mixta-like Transcription Factor in Leaves

(2020) Javier Galdon-Armero et al.   PLANT CELL

The res ( restored cell structure by salinity ) tomato mutant reveals the role of the DEAD ‐box RNA helicase SlDEAD39 in plant development and salt response

(2020) Carmen Capel et al.   PLANT CELL AND ENVIRONMENT

ENOregulates tomato fruit size through the floral meristem development network

(2020) Fernando J. Yuste-Lisbona et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Transcriptomic and functional analyses uncover the regulatory role of lncRNA000170 in tomato multicellular trichome formation

(2020) Xiaoli Liao et al.   PLANT JOURNAL

The HD-Zip IV transcription factor SlHDZIV8 controls multicellular trichome morphology by regulating the expression of Hairless-2

(2020) Qingmin Xie et al.   JOURNAL OF EXPERIMENTAL BOTANY

CpG traffic lights are markers of regulatory regions in human genome

(2019) Anna V. Lioznova et al.   BMC GENOMICS

Hair , encoding a single C2H2 zinc finger protein, regulates multicellular trichome formation in tomato

(2018) Jiang Chang et al.   PLANT JOURNAL

A methylated-DNA-binding complex required for plant development mediates transcriptional activation of promoter methylated genes

(2018) Qiang-Qiang Zhao et al.   Journal of Integrative Plant Biology

A Group of SUVH Methyl-DNA Binding Proteins Regulate Expression of the DNA Demethylase ROS1 in Arabidopsis

(2018) Xinlong Xiao et al.   Journal of Integrative Plant Biology

SlMYC1 Regulates Type VI Glandular Trichome Formation and Terpene Biosynthesis in Tomato Glandular Cells

(2018) Jiesen Xu et al.   PLANT CELL

A DNA methylation reader complex that enhances gene transcription

(2018) C. Jake Harris et al.   SCIENCE

Single-base methylome analysis reveals dynamic epigenomic differences associated with water deficit in apple

(2017) Jidi Xu et al.   PLANT BIOTECHNOLOGY JOURNAL

A collection of enhancer trap insertional mutants for functional genomics in tomato

(2017) Fernando Pérez-Martín et al.   PLANT BIOTECHNOLOGY JOURNAL

Loss of type-IV glandular trichomes is a heterochronic trait in tomato and can be reverted by promoting juvenility

(2017) Eloisa Vendemiatti et al.   PLANT SCIENCE

The tomato B-type cyclin gene, SlCycB2 , plays key roles in reproductive organ development, trichome initiation, terpenoids biosynthesis and Prodenia litura defense

(2017) Shenghua Gao et al.   PLANT SCIENCE

Computational characterization of substrate and product specificities, and functionality of S-adenosylmethionine binding pocket in histone lysine methyltransferases from Arabidopsis, rice and maize

(2017) Mutyala Satish et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

Molecular cloning of the tomatoHairlessgene implicates actin dynamics in trichome-mediated defense and mechanical properties of stem tissue

(2016) Jin-Ho Kang et al.   JOURNAL OF EXPERIMENTAL BOTANY

Breaking-Cas—interactive design of guide RNAs for CRISPR-Cas experiments for ENSEMBL genomes

(2016) Juan C. Oliveros et al.   NUCLEIC ACIDS RESEARCH

A modular toolbox for gRNA–Cas9 genome engineering in plants based on the GoldenBraid standard

(2016) Marta Vazquez-Vilar et al.   Plant Methods

A transcription factor hierarchy defines an environmental stress response network

(2016) L. Song et al.   SCIENCE

Fine mapping of the dialytic gene that controls multicellular trichome formation and stamen development in tomato

(2016) Jiang Chang et al.   THEORETICAL AND APPLIED GENETICS

Wide-genome QTL mapping of fruit quality traits in a tomato RIL population derived from the wild-relative species Solanum pimpinellifolium L.

(2015) Carmen Capel et al.   THEORETICAL AND APPLIED GENETICS

Arabidopsis thalianahomeobox 12 (ATHB12), a homeodomain-leucine zipper protein, regulates leaf growth by promoting cell expansion and endoreduplication

(2014) Yoon-Sun Hur et al.   NEW PHYTOLOGIST

Differences in insect resistance between tomato species endemic to the Galapagos Islands

(2013) Alejandro F Lucatti et al.   BMC EVOLUTIONARY BIOLOGY

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

Uniform ripening Encodes a Golden 2-like Transcription Factor Regulating Tomato Fruit Chloroplast Development

(2012) A. L. T. Powell et al.   SCIENCE

Genetic mapping of two QTL from the wild tomato Solanum pimpinellifolium L. controlling resistance against two-spotted spider mite (Tetranychus urticae Koch)

(2012) María Salinas et al.   THEORETICAL AND APPLIED GENETICS

methylKit: a comprehensive R package for the analysis of genome-wide DNA methylation profiles

(2012) Altuna Akalin et al.   GENOME BIOLOGY

The variant call format and VCFtools

(2011) P. Danecek et al.   BIOINFORMATICS

A framework for variation discovery and genotyping using next-generation DNA sequencing data

(2011) Mark A DePristo et al.   NATURE GENETICS

A regulatory gene induces trichome formation and embryo lethality in tomato

(2011) C. Yang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Fine-mapping of the woolly gene controlling multicellular trichome formation and embryonic development in tomato

(2011) Changxian Yang et al.   THEORETICAL AND APPLIED GENETICS

Establishing, maintaining and modifying DNA methylation patterns in plants and animals

(2010) Julie A. Law et al.   NATURE REVIEWS GENETICS

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Distortion of trichome morphology by the hairless mutation of tomato affects leaf surface chemistry

(2009) Jin-Ho Kang et al.   JOURNAL OF EXPERIMENTAL BOTANY