Strain-level analysis reveals the vertical microbial transmission during the life cycle of bumblebee
Published 2021 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Strain-level analysis reveals the vertical microbial transmission during the life cycle of bumblebee
Authors
Keywords
-
Journal
Microbiome
Volume 9, Issue 1, Pages -
Publisher
Springer Science and Business Media LLC
Online
2021-11-04
DOI
10.1186/s40168-021-01163-1
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Using MicrobiomeAnalyst for comprehensive statistical, functional, and meta-analysis of microbiome data
- (2020) Jasmine Chong et al. Nature Protocols
- Vast Differences in Strain-Level Diversity in the Gut Microbiota of Two Closely Related Honey Bee Species
- (2020) Kirsten M. Ellegaard et al. CURRENT BIOLOGY
- Transmission of human-associated microbiota along family and social networks
- (2019) Ilana L. Brito et al. Nature Microbiology
- Genomic diversity landscape of the honey bee gut microbiota
- (2019) Kirsten M. Ellegaard et al. Nature Communications
- Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2
- (2019) Evan Bolyen et al. NATURE BIOTECHNOLOGY
- Links between metamorphosis and symbiosis in holometabolous insects
- (2019) Tobin J. Hammer et al. PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- KofamKOALA: KEGG ortholog assignment based on profile HMM and adaptive score threshold
- (2019) Takuya Aramaki et al. BIOINFORMATICS
- Division of labor in honey bee gut microbiota for plant polysaccharide digestion
- (2019) Hao Zheng et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- OUP accepted manuscript
- (2018) BIOINFORMATICS
- Strain-Level Analysis of Mother-to-Child Bacterial Transmission during the First Few Months of Life
- (2018) Moran Yassour et al. Cell Host & Microbe
- Mother-to-Infant Microbial Transmission from Different Body Sites Shapes the Developing Infant Gut Microbiome
- (2018) Pamela Ferretti et al. Cell Host & Microbe
- dbCAN2: a meta server for automated carbohydrate-active enzyme annotation
- (2018) Han Zhang et al. NUCLEIC ACIDS RESEARCH
- Bacterial communities associated with honeybee food stores are correlated with land use
- (2018) Philip Donkersley et al. Ecology and Evolution
- Transmission of mutualistic bacteria in social and gregarious insects
- (2018) Thomas Ogao Onchuru et al. Current Opinion in Insect Science
- Optimizing taxonomic classification of marker-gene amplicon sequences with QIIME 2’s q2-feature-classifier plugin
- (2018) Nicholas A. Bokulich et al. Microbiome
- MetaWRAP—a flexible pipeline for genome-resolved metagenomic data analysis
- (2018) Gherman V. Uritskiy et al. Microbiome
- Honey bees as models for gut microbiota research
- (2018) Hao Zheng et al. LAB ANIMAL
- High throughput ANI analysis of 90K prokaryotic genomes reveals clear species boundaries
- (2018) Chirag Jain et al. Nature Communications
- Morphological characterization and staging of bumble bee pupae
- (2018) Li Tian et al. PeerJ
- Microbial strain-level population structure and genetic diversity from metagenomes
- (2017) Duy Tin Truong et al. GENOME RESEARCH
- metaSPAdes: a new versatile metagenomic assembler
- (2017) Sergey Nurk et al. GENOME RESEARCH
- Honeybee gut microbiota promotes host weight gain via bacterial metabolism and hormonal signaling
- (2017) Hao Zheng et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Disentangling metabolic functions of bacteria in the honey bee gut
- (2017) Lucie Kešnerová et al. PLOS BIOLOGY
- Recovery of nearly 8,000 metagenome-assembled genomes substantially expands the tree of life
- (2017) Donovan H. Parks et al. Nature Microbiology
- Dynamic microbiome evolution in social bees
- (2017) Waldan K. Kwong et al. Science Advances
- An integrated metagenomics pipeline for strain profiling reveals novel patterns of bacterial transmission and biogeography
- (2016) Stephen Nayfach et al. GENOME RESEARCH
- Colony contact contributes to the diversity of gut bacteria in bumblebees (Bombus terrestris)
- (2016) Annelies Billiet et al. Insect Science
- Strain diversity and host specificity in a specialized gut symbiont of honeybees and bumblebees
- (2016) Elijah Powell et al. MOLECULAR ECOLOGY
- DADA2: High-resolution sample inference from Illumina amplicon data
- (2016) Benjamin J Callahan et al. NATURE METHODS
- Gut microbial communities of social bees
- (2016) Waldan K. Kwong et al. NATURE REVIEWS MICROBIOLOGY
- Metabolism of Toxic Sugars by Strains of the Bee Gut Symbiont Gilliamella apicola
- (2016) Hao Zheng et al. mBio
- VSEARCH: a versatile open source tool for metagenomics
- (2016) Torbjørn Rognes et al. PeerJ
- Plasticity in the gut microbial community and uptake of Enterobacteriaceae (Gammaproteobacteria) in Bombus terrestris bumblebees’ nests when reared indoors and moved to an outdoor environment
- (2015) Laurian Parmentier et al. APIDOLOGIE
- Development of the Honey Bee Gut Microbiome throughout the Queen-Rearing Process
- (2015) David R. Tarpy et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes
- (2015) Donovan H. Parks et al. GENOME RESEARCH
- Variation in Honey Bee Gut Microbial Diversity Affected by Ontogenetic Stage, Age and Geographic Location
- (2015) Zuzana Hroncova et al. PLoS One
- 16S rRNA Amplicon Sequencing Demonstrates that Indoor-Reared Bumblebees (Bombus terrestris) Harbor a Core Subset of Bacteria Normally Associated with the Wild Host
- (2015) Ivan Meeus et al. PLoS One
- Caste-Specific Differences in Hindgut Microbial Communities of Honey Bees (Apis mellifera)
- (2015) Karen M. Kapheim et al. PLoS One
- Origin and Effect of Alpha 2.2 Acetobacteraceae in Honey Bee Larvae and Description of Parasaccharibacter apium gen. nov., sp. nov.
- (2014) Vanessa Corby-Harris et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Routes of Acquisition of the Gut Microbiota of the Honey Bee Apis mellifera
- (2014) J. Elijah Powell et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Prokka: rapid prokaryotic genome annotation
- (2014) T. Seemann BIOINFORMATICS
- Genomics and host specialization of honey bee and bumble bee gut symbionts
- (2014) W. K. Kwong et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Diversity and evolutionary patterns of bacterial gut associates of corbiculate bees
- (2013) Hauke Koch et al. MOLECULAR ECOLOGY
- Establishment of Characteristic Gut Bacteria during Development of the Honeybee Worker
- (2012) Vincent G. Martinson et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Socially transmitted gut microbiota protect bumble bees against an intestinal parasite
- (2011) H. Koch et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- A complex journey: transmission of microbial symbionts
- (2010) Monika Bright et al. NATURE REVIEWS MICROBIOLOGY
- FastTree 2 – Approximately Maximum-Likelihood Trees for Large Alignments
- (2010) Morgan N. Price et al. PLoS One
- Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample
- (2010) J. G. Caporaso et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- The Honey Bee Epigenomes: Differential Methylation of Brain DNA in Queens and Workers
- (2010) Frank Lyko et al. PLOS BIOLOGY
Find Funding. Review Successful Grants.
Explore over 25,000 new funding opportunities and over 6,000,000 successful grants.
ExploreAdd your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload Now