miRNAomic Approach to Plant Nitrogen Starvation

miRNA regulation and stress adaptation in plants

(2021) Luca Pagano et al.   ENVIRONMENTAL AND EXPERIMENTAL BOTANY

Regulation of pri-MIRNA processing: mechanistic insights into the miRNA homeostasis in plant

(2021) Jayanti Jodder   PLANT CELL REPORTS

Transcriptomic and genome-wide association study reveal long noncoding RNAs responding to nitrogen deficiency in maize

(2021) Peng Ma et al.   BMC PLANT BIOLOGY

Targeting Nitrogen Metabolism and Transport Processes to Improve Plant Nitrogen Use Efficiency

(2021) Samantha Vivia The et al.   Frontiers in Plant Science

Regulatory short RNAs : A decade's tale for manipulating salt tolerance in plants

(2021) Pooja Negi et al.   PHYSIOLOGIA PLANTARUM

Response of Root Growth and Development to Nitrogen and Potassium Deficiency as well as microRNA-Mediated Mechanism in Peanut (Arachis hypogaea L.)

(2021) Lijie Li et al.   Frontiers in Plant Science

miRNA applications for engineering abiotic stress tolerance in plants

(2020) Shabir Hussain Wani et al.   BIOLOGIA

Identification of microRNAs in developing wheat grain that are potentially involved in regulating grain characteristics and the response to nitrogen levels

(2020) Gege Hou et al.   BMC PLANT BIOLOGY

MicroRNA biogenesis in plant

(2020) Zihan Gao et al.   PLANT GROWTH REGULATION

Characterizing the Role of the miR156-SPL Network in Plant Development and Stress Response

(2020) John Martin Jerome Jeyakumar et al.   Plants-Basel

Plant microRNAs: Biogenesis, Homeostasis, and Degradation

(2019) Junli Wang et al.   Frontiers in Plant Science

Characterization of the Spatial and Temporal Expression of Two Soybean miRNAs Identifies SCL6 as a Novel Regulator of Soybean Nodulation

(2019) Md Shakhawat Hossain et al.   Frontiers in Plant Science

Physiological responses and small RNAs changes in maize under nitrogen deficiency and resupply

(2019) Zhenchao Yang et al.   Genes & Genomics

A review of nitrogen translocation and nitrogen-use efficiency

(2019) Yingying Xing et al.   JOURNAL OF PLANT NUTRITION

Disruption of MIR396e and MIR396f improves rice yield under nitrogen-deficient conditions

(2019) Jinshan Zhang et al.   National Science Review

Transcriptomic analyses of rice (Oryza sativa) genes and non-coding RNAs under nitrogen starvation using multiple omics technologies

(2018) Sang-Yoon Shin et al.   BMC GENOMICS

The way out and in: phloem loading and unloading of amino acids

(2018) Mechthild Tegeder et al.   CURRENT OPINION IN PLANT BIOLOGY

MicroRNAs in durum wheat seedlings under chronic and short-term nitrogen stress

(2018) Diana L. Zuluaga et al.   FUNCTIONAL & INTEGRATIVE GENOMICS

Overexpression of miR169o, an Overlapping MicroRNA in Response to Both Nitrogen Limitation and Bacterial Infection, Promotes Nitrogen Use Efficiency and Susceptibility to Bacterial Blight in Rice

(2018) Chao Yu et al.   PLANT AND CELL PHYSIOLOGY

Understanding nitrate uptake, signaling and remobilisation for improving plant nitrogen use efficiency

(2018) Surya Kant   SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY

An integrated analysis of mRNA and sRNA transcriptional profiles in Coffea arabica L. roots: insights on nitrogen starvation responses

(2018) Tiago Benedito dos Santos et al.   FUNCTIONAL & INTEGRATIVE GENOMICS

Regulation of microRNA biogenesis and its crosstalk with other cellular pathways

(2018) Thomas Treiber et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

Evaluation of mature miR398 family, expression analysis and the post-transcriptional regulation evidence in gamma-irradiated and nitrogen-stressed Medicago sativa seedlings

(2018) Mohammed Javed et al.   INTERNATIONAL JOURNAL OF RADIATION BIOLOGY

Source and sink mechanisms of nitrogen transport and use

(2017) Mechthild Tegeder et al.   NEW PHYTOLOGIST

Functional Roles of microRNAs in Agronomically Important Plants—Potential as Targets for Crop Improvement and Protection

(2017) Arnaud T. Djami-Tchatchou et al.   Frontiers in Plant Science

Characterization and Function of MicroRNA∗s in Plants

(2017) Wei-wei Liu et al.   Frontiers in Plant Science

A Review of Methods to Improve Nitrogen Use Efficiency in Agriculture

(2017) Lakesh Sharma et al.   Sustainability

Identification of microRNAs in rice root in response to nitrate and ammonium

(2016) Hua Li et al.   Journal of Genetics and Genomics

Global Analysis of Truncated RNA Ends Reveals New Insights into Ribosome Stalling in Plants

(2016) Cheng‐Yu Hou et al.   PLANT CELL

Nitrate Starvation Induced Changes in Root System Architecture, Carbon:Nitrogen Metabolism, and miRNA Expression in Nitrogen-Responsive Wheat Genotypes

(2015) Subodh Kumar Sinha et al.   APPLIED BIOCHEMISTRY AND BIOTECHNOLOGY

micro RNA 172 (miR172) signals epidermal infection and is expressed in cells primed for bacterial invasion inLotus japonicusroots and nodules

(2015) Dennis B. Holt et al.   NEW PHYTOLOGIST

SKI2 mediates degradation of RISC 5′-cleavage fragments and prevents secondary siRNA production from miRNA targets inArabidopsis

(2015) Anja Branscheid et al.   NUCLEIC ACIDS RESEARCH

Identification and functional characterization of soybean root hair microRNAs expressed in response to Bradyrhizobium japonicum infection

(2015) Zhe Yan et al.   PLANT BIOTECHNOLOGY JOURNAL

Constitutive Expression of RiceMicroRNA528Alters Plant Development and Enhances Tolerance to Salinity Stress and Nitrogen Starvation in Creeping Bentgrass

(2015) Shuangrong Yuan et al.   PLANT PHYSIOLOGY

MicroRNA857 Is Involved in the Regulation of Secondary Growth of Vascular Tissues in Arabidopsis

(2015) Yuanyuan Zhao et al.   PLANT PHYSIOLOGY

The Micro-RNA172c-APETALA2-1 Node as a Key Regulator of the Common Bean-Rhizobium etliNitrogen Fixation Symbiosis

(2015) Bárbara Nova-Franco et al.   PLANT PHYSIOLOGY

Identification of nitrogen starvation-responsive microRNAs in Chrysanthemum nankingense

(2015) Aiping Song et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

NPKS uptake, sensing, and signaling and miRNAs in plant nutrient stress

(2015) Manoj Nath et al.   PROTOPLASMA

Uncovering miRNAs involved in crosstalk between nutrient deficiencies in Arabidopsis

(2015) Gang Liang et al.   Scientific Reports

NPK macronutrients and microRNA homeostasis

(2015) Franceli R. Kulcheski et al.   Frontiers in Plant Science

Role of microRNAs involved in plant response to nitrogen and phosphorous limiting conditions

(2015) Giao N. Nguyen et al.   Frontiers in Plant Science

Gene regulation by translational inhibition is determined by Dicer partnering proteins

(2015) Rodrigo S. Reis et al.   Nature Plants

MiR171h restricts root symbioses and shows like its target NSP2 a complex transcriptional regulation in Medicago truncatula

(2014) Vinzenz Hofferek et al.   BMC PLANT BIOLOGY

Differential profiling analysis of miRNAs reveals a regulatory role in low N stress response of Populus

(2014) Yuanyuan Ren et al.   FUNCTIONAL & INTEGRATIVE GENOMICS

Prediction of potential novel microRNAs in soybean when in symbiosis

(2014) G.A. Barros-Carvalho et al.   GENETICS AND MOLECULAR RESEARCH

Nitrate transport and signalling in Arabidopsis

(2014) Anne Krapp et al.   JOURNAL OF EXPERIMENTAL BOTANY

miR444a has multiple functions in the rice nitrate-signaling pathway

(2014) Yongsheng Yan et al.   PLANT JOURNAL

DWARF TILLER1, a WUSCHEL-Related Homeobox Transcription Factor, Is Required for Tiller Growth in Rice

(2014) Wenfei Wang et al.   PLoS Genetics

Combined small RNA and degradome sequencing reveals novel miRNAs and their targets in response to low nitrate availability in maize

(2013) Yongping Zhao et al.   ANNALS OF BOTANY

Inferring microRNA and transcription factor regulatory networks in heterogeneous data

(2013) Thuc D Le et al.   BMC BIOINFORMATICS

Integrated RNA-seq and sRNA-seq analysis identifies novel nitrate-responsive genes in Arabidopsis thaliana roots

(2013) Elena A Vidal et al.   BMC GENOMICS

MicroRNAs Inhibit the Translation of Target mRNAs on the Endoplasmic Reticulum in Arabidopsis

(2013) Shengben Li et al.   CELL

Molecular Insights into microRNA-Mediated Translational Repression in Plants

(2013) Hiro-oki Iwakawa et al.   MOLECULAR CELL

Speak, friend and enter: signalling systems that promote beneficial symbiotic associations in plants

(2013) Giles E. D. Oldroyd   NATURE REVIEWS MICROBIOLOGY

Role of microRNAs in plant responses to nutrient stress

(2013) Houqing Zeng et al.   PLANT AND SOIL

miR396 affects mycorrhization and root meristem activity in the legumeMedicago truncatula

(2013) Jérémie Bazin et al.   PLANT JOURNAL

Ectopic Expression of miR160 Results in Auxin Hypersensitivity, Cytokinin Hyposensitivity, and Inhibition of Symbiotic Nodule Development in Soybean

(2013) M. Turner et al.   PLANT PHYSIOLOGY

Elucidation of miRNAs-Mediated Responses to Low Nitrogen Stress by Deep Sequencing of Two Soybean Genotypes

(2013) Yejian Wang et al.   PLoS One

Systemic regulation of mineral homeostasis by micro RNAs

(2013) Julia Kehr   Frontiers in Plant Science

The use of metabolomics integrated with transcriptomic and proteomic studies for identifying key steps involved in the control of nitrogen metabolism in crops such as maize

(2012) Nardjis Amiour et al.   JOURNAL OF EXPERIMENTAL BOTANY

Identification and characterization of microRNAs from wheat (Triticum aestivum L.) under phosphorus deprivation

(2012) Xiaolei Zhao et al.   JOURNAL OF PLANT BIOCHEMISTRY AND BIOTECHNOLOGY

IAA-Ala Resistant3, an Evolutionarily Conserved Target of miR167, Mediates Arabidopsis Root Architecture Changes during High Osmotic Stress

(2012) N. Kinoshita et al.   PLANT CELL

Auxin ControlsArabidopsisAdventitious Root Initiation by Regulating Jasmonic Acid Homeostasis

(2012) Laurent Gutierrez et al.   PLANT CELL

PHO2-Dependent Degradation of PHO1 Modulates Phosphate Homeostasis in Arabidopsis

(2012) T.-Y. Liu et al.   PLANT CELL

Functional Analysis of Three Arabidopsis ARGONAUTES Using Slicer-Defective Mutants

(2012) A. Carbonell et al.   PLANT CELL

Maize Source Leaf Adaptation to Nitrogen Deficiency Affects Not Only Nitrogen and Carbon Metabolism But Also Control of Phosphate Homeostasis

(2012) U. Schluter et al.   PLANT PHYSIOLOGY

Two MicroRNAs Linked to Nodule Infection and Nitrogen-Fixing Ability in the Legume Lotus japonicus

(2012) A. De Luis et al.   PLANT PHYSIOLOGY

Overexpression of Arabidopsis miR157b induces bushy architecture and delayed phase transition in Torenia fournieri

(2012) Masahito Shikata et al.   PLANTA

Cloning and Characterization of Maize miRNAs Involved in Responses to Nitrogen Deficiency

(2012) Meng Zhao et al.   PLoS One

The R2R3-MYB Transcription Factor Gene Family in Maize

(2012) Hai Du et al.   PLoS One

Salt Stress Induced Variation in DNA Methylation Pattern and Its Influence on Gene Expression in Contrasting Rice Genotypes

(2012) Ratna Karan et al.   PLoS One

Identification and Comparative Analysis of MicroRNAs Associated with Low-N Tolerance in Rice Genotypes

(2012) Lata Nischal et al.   PLoS One

Identification of Nitrogen Starvation-Responsive MicroRNAs in Arabidopsis thaliana

(2012) Gang Liang et al.   PLoS One

Non-CO2 greenhouse gases and climate change

(2011) S. A. Montzka et al.   NATURE

Involvement of miR169 in the nitrogen-starvation responses in Arabidopsis

(2011) Meng Zhao et al.   NEW PHYTOLOGIST

Negative Regulation of Anthocyanin Biosynthesis inArabidopsisby a miR156-Targeted SPL Transcription Factor

(2011) Jin-Ying Gou et al.   PLANT CELL

Expression and tissue-specific localization of nitrate-responsive miRNAs in roots of maize seedlings

(2011) SARA TREVISAN et al.   PLANT CELL AND ENVIRONMENT

Genome-Wide Identification of MicroRNAs in Response to Low Nitrate Availability in Maize Leaves and Roots

(2011) Zhenhua Xu et al.   PLoS One

Mutations in the GW-repeat protein SUO reveal a developmental function for microRNA-mediated translational repression in Arabidopsis

(2011) L. Yang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genetic Regulation by NLA and MicroRNA827 for Maintaining Nitrate-Dependent Phosphate Homeostasis in Arabidopsis

(2011) Surya Kant et al.   PLoS Genetics

ARGONAUTE10 and ARGONAUTE1 Regulate the Termination of Floral Stem Cells through Two MicroRNAs in Arabidopsis

(2011) Lijuan Ji et al.   PLoS Genetics

Laccase-catalysed oxidations of naturally occurring phenols: from in vivo biosynthetic pathways to green synthetic applications

(2011) Jong-Rok Jeon et al.   Microbial Biotechnology

Over-expression of sly-miR156a in tomato results in multiple vegetative and reproductive trait alterations and partial phenocopy of thesftmutant

(2010) Xiaohui Zhang et al.   FEBS LETTERS

MicroRNAs prevent precocious gene expression and enable pattern formation during plant embryogenesis

(2010) M. D. Nodine et al.   GENES & DEVELOPMENT

Understanding plant response to nitrogen limitation for the improvement of crop nitrogen use efficiency

(2010) S. Kant et al.   JOURNAL OF EXPERIMENTAL BOTANY

DNA Methylation Mediated by a MicroRNA Pathway

(2010) Liang Wu et al.   MOLECULAR CELL

MicroRNA expression profile in common bean (Phaseolus vulgaris) under nutrient deficiency stresses and manganese toxicity

(2010) Oswaldo Valdés-López et al.   NEW PHYTOLOGIST

miR156-Targeted and Nontargeted SBP-Box Transcription Factors Act in Concert to Secure Male Fertility inArabidopsis

(2010) Shuping Xing et al.   PLANT CELL

Temporal Control of Trichome Distribution by MicroRNA156-Targeted SPL Genes in Arabidopsis thaliana

(2010) N. Yu et al.   PLANT CELL

Transcriptome-wide identification of microRNA targets in rice

(2010) Yong-Fang Li et al.   PLANT JOURNAL

Identification of MicroRNAs Involved in Pathogen-Associated Molecular Pattern-Triggered Plant Innate Immunity

(2010) Y. Li et al.   PLANT PHYSIOLOGY

Nitrate-responsive miR393/AFB3 regulatory module controls root system architecture in Arabidopsis thaliana

(2010) E. A. Vidal et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

miR156-Regulated SPL Transcription Factors Define an Endogenous Flowering Pathway in Arabidopsis thaliana

(2009) Jia-Wei Wang et al.   CELL

Small RNA Diversity in Plants and its Impact in Development

(2009) Christine Lelandais-Briere et al.   CURRENT GENOMICS

Differential and dynamic regulation of miR398 in response to ABA and salt stress in Populus tremula and Arabidopsis thaliana

(2009) Xiaoyun Jia et al.   PLANT MOLECULAR BIOLOGY

Identification of Nutrient-Responsive Arabidopsis and Rapeseed MicroRNAs by Comprehensive Real-Time Polymerase Chain Reaction Profiling and Small RNA Sequencing

(2009) B. D. Pant et al.   PLANT PHYSIOLOGY

Nutrient Imbalances in Agricultural Development

(2009) P. M. Vitousek et al.   SCIENCE

Nitrous Oxide: No Laughing Matter

(2009) D. J. Wuebbles   SCIENCE

Identification and expression analysis of miRNAs from nitrogen-fixing soybean nodules

(2008) Yanwei Wang et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

Novel and nodulation-regulated microRNAs in soybean roots

(2008) Senthil Subramanian et al.   BMC GENOMICS

Specificity of ARGONAUTE7-miR390 Interaction and Dual Functionality in TAS3 Trans-Acting siRNA Formation

(2008) Taiowa A. Montgomery et al.   CELL

Endogenous siRNA and miRNA Targets Identified by Sequencing of the Arabidopsis Degradome

(2008) Charles Addo-Quaye et al.   CURRENT BIOLOGY

MicroRNA-mediated Systemic Down-regulation of Copper Protein Expression in Response to Low Copper Availability inArabidopsis

(2008) Salah E. Abdel-Ghany et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Global identification of microRNA–target RNA pairs by parallel analysis of RNA ends

(2008) Marcelo A German et al.   NATURE BIOTECHNOLOGY

The Arabidopsis NFYA5 Transcription Factor Is Regulated Transcriptionally and Posttranscriptionally to Promote Drought Resistance

(2008) W.-X. Li et al.   PLANT CELL

MicroRNA166 controls root and nodule development in Medicago truncatula

(2008) Adnane Boualem et al.   PLANT JOURNAL

Cell-specific nitrogen responses mediate developmental plasticity

(2008) M. L. Gifford et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Microarray-based analysis of stress-regulated microRNAs in Arabidopsis thaliana

(2008) H.-H. Liu et al.   RNA

Widespread Translational Inhibition by Plant miRNAs and siRNAs

(2008) P. Brodersen et al.   SCIENCE