Metabolomics and Transcriptomics Integration of Early Response of Populus tomentosa to Reduced Nitrogen Availability

Nitrate deficiency decreased photosynthesis and oxidation-reduction processes, but increased cellular transport, lignin biosynthesis and flavonoid metabolism revealed by RNA-Seq in Oryza sativa leaves

(2020) Cai-Hong Shao et al.   PLoS One

The molecular–physiological functions of mineral macronutrients and their consequences for deficiency symptoms in plants

(2020) Thomas Christian Bang et al.   NEW PHYTOLOGIST

The physiological response of photosynthesis to nitrogen deficiency

(2020) Xiaohuan Mu et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

Untargeted liquid chromatography coupled with mass spectrometry reveals metabolic changes in nitrogen-deficient Isatis indigotica Fortune

(2019) Yi-Wen Cao et al.   PHYTOCHEMISTRY

Hardwood Tree Genomics: Unlocking Woody Plant Biology

(2018) Gerald A. Tuskan et al.   Frontiers in Plant Science

Genome-wide transcriptome profiling of nitrogen fixation in Paenibacillus sp. WLY78

(2016) Hao-wen Shi et al.   BMC MICROBIOLOGY

Differential transcriptome analysis of leaves of tea plant (Camellia sinensis) provides comprehensive insights into the defense responses to Ectropis oblique attack using RNA-Seq

(2016) Ya-Nan Wang et al.   FUNCTIONAL & INTEGRATIVE GENOMICS

Genome-wide identification and characterization of novel lncRNAs in Populus under nitrogen deficiency

(2016) Min Chen et al.   MOLECULAR GENETICS AND GENOMICS

Association genetics in Populus reveals the interactions between Pto-miR160a and its target Pto-ARF16

(2016) Jiaxing Tian et al.   MOLECULAR GENETICS AND GENOMICS

The Arabidopsis leaf transcriptome reveals distinct but also overlapping responses to colonization by phyllosphere commensals and pathogen infection with impact on plant health

(2016) Christine Vogel et al.   NEW PHYTOLOGIST

Nitrogen Limitation Adaptation (NLA) is involved in source-to-sink remobilization of nitrate by mediating the degradation of NRT1.7 in Arabidopsis

(2016) Wenwen Liu et al.   NEW PHYTOLOGIST

Programming of Plant Leaf Senescence with Temporal and Inter-Organellar Coordination of Transcriptome in Arabidopsis

(2016) Hye Ryun Woo et al.   PLANT PHYSIOLOGY

Down-regulation of nitrogen/carbon metabolism coupled with coordinative hormone modulation contributes to developmental inhibition of the maize ear under nitrogen limitation

(2016) Jiaojiao Yu et al.   PLANTA

Gibberellin Is Involved in Inhibition of Cucumber Growth and Nitrogen Uptake at Suboptimal Root-Zone Temperatures

(2016) Longqiang Bai et al.   PLoS One

Physiological and transcriptional responses of two contrastingPopulusclones to nitrogen stress

(2016) Xiaoli Wang et al.   TREE PHYSIOLOGY

Genome-wide transcriptomic profiles reveal multiple regulatory responses of poplar to Lonsdalea quercina infection

(2016) Jia Hou et al.   TREES-STRUCTURE AND FUNCTION

Carbon: Nitrogen Interaction Regulates Expression of Genes Involved in N-Uptake and Assimilation in Brassica juncea L.

(2016) Parul Goel et al.   PLoS One

Nitrate Starvation Induced Changes in Root System Architecture, Carbon:Nitrogen Metabolism, and miRNA Expression in Nitrogen-Responsive Wheat Genotypes

(2015) Subodh Kumar Sinha et al.   APPLIED BIOCHEMISTRY AND BIOTECHNOLOGY

Transcriptomic analysis of a moderately growing subisolate Botryococcus braunii 779 (Chlorophyta) in response to nitrogen deprivation

(2015) Lei Fang et al.   Biotechnology for Biofuels

Transcriptome analysis of nitrogen-starvation-responsive genes in rice

(2015) Wenzhu Yang et al.   BMC PLANT BIOLOGY

Nitrogen signaling and use efficiency in plants: what's new?

(2015) Qian Liu et al.   CURRENT OPINION IN PLANT BIOLOGY

Transcriptome-Wide Identification of miRNA Targets under Nitrogen Deficiency in Populus tomentosa Using Degradome Sequencing

(2015) Min Chen et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

ABI1 regulates carbon/nitrogen-nutrient signal transduction independent of ABA biosynthesis and canonical ABA signalling pathways in Arabidopsis

(2015) Yu Lu et al.   JOURNAL OF EXPERIMENTAL BOTANY

Transcriptome sequencing reveals the roles of transcription factors in modulating genotype by nitrogen interaction in maize

(2015) Qiuyue Chen et al.   PLANT CELL REPORTS

A systems biology approach identifies new regulators of poplar root development under low nitrogen

(2015) Madhumita Dash et al.   PLANT JOURNAL

Global poplar root and leaf transcriptomes reveal links between growth and stress responses under nitrogen starvation and excess

(2015) Jie Luo et al.   TREE PHYSIOLOGY

Transcriptome analysis reveals regulatory networks underlying differential susceptibility to Botrytis cinerea in response to nitrogen availability in Solanum lycopersicum

(2015) Andrea Vega et al.   Frontiers in Plant Science

Differential profiling analysis of miRNAs reveals a regulatory role in low N stress response of Populus

(2014) Yuanyuan Ren et al.   FUNCTIONAL & INTEGRATIVE GENOMICS

RNA-Seq-Based Transcriptome Profiling of Early Nitrogen Deficiency Response in Cucumber Seedlings Provides New Insight into the Putative Nitrogen Regulatory Network

(2014) Wenchao Zhao et al.   PLANT AND CELL PHYSIOLOGY

Nitrogen metabolism of two contrasting poplar species during acclimation to limiting nitrogen availability

(2013) Jie Luo et al.   JOURNAL OF EXPERIMENTAL BOTANY

Nitrogen deprivation promotesPopulusroot growth through global transcriptome reprogramming and activation of hierarchical genetic networks

(2013) Hairong Wei et al.   NEW PHYTOLOGIST

Combined phosphate and nitrogen limitation generates a nutrient stress transcriptome favorable for arbuscular mycorrhizal symbiosis inMedicago truncatula

(2013) Laurent Bonneau et al.   NEW PHYTOLOGIST

Nitrogen-Dependent Regulation of De Novo Cytokinin Biosynthesis in Rice: The Role of Glutamine Metabolism as an Additional Signal

(2013) Tomoe Kamada-Nobusada et al.   PLANT AND CELL PHYSIOLOGY

Glucosyltransferase UGT76C1 finely modulates cytokinin responses via cytokinin N-glucosylation in Arabidopsis thaliana

(2013) Jun Wang et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

De novo assembly and Characterisation of the Transcriptome during seed development, and generation of genic-SSR markers in Peanut (Arachis hypogaea L.)

(2012) Jianan Zhang et al.   BMC GENOMICS

Maize root growth angles become steeper under low N conditions

(2012) S. Trachsel et al.   FIELD CROPS RESEARCH

Transcriptome response to nitrogen starvation in rice

(2012) Hongmei Cai et al.   JOURNAL OF BIOSCIENCES

Genetic Diversity and Population Structure of Chinese White Poplar (Populus tomentosa) Revealed by SSR Markers

(2012) Qingzhang Du et al.   JOURNAL OF HEREDITY

Mutational Bias and Gene Conversion Affect the Intraspecific Nitrogen Stoichiometry of the Arabidopsis thaliana Transcriptome

(2012) Torsten Günther et al.   MOLECULAR BIOLOGY AND EVOLUTION

Deep sequencing analysis of the transcriptomes of peanut aerial and subterranean young pods identifies candidate genes related to early embryo abortion

(2012) Xiaoping Chen et al.   PLANT BIOTECHNOLOGY JOURNAL

Maize Source Leaf Adaptation to Nitrogen Deficiency Affects Not Only Nitrogen and Carbon Metabolism But Also Control of Phosphate Homeostasis

(2012) U. Schluter et al.   PLANT PHYSIOLOGY

The Role of Plants in the Effects of Global Change on Nutrient Availability and Stoichiometry in the Plant-Soil System

(2012) J. Sardans et al.   PLANT PHYSIOLOGY

Hormonal control of nitrogen acquisition: roles of auxin, abscisic acid, and cytokinin

(2011) Takatoshi Kiba et al.   JOURNAL OF EXPERIMENTAL BOTANY

Metabolomic approaches toward understanding nitrogen metabolism in plants

(2011) M. Kusano et al.   JOURNAL OF EXPERIMENTAL BOTANY

Natural variation of Arabidopsis response to nitrogen availability

(2011) Sobia Ikram et al.   JOURNAL OF EXPERIMENTAL BOTANY

Inhibition of Human Melanoma Cell Growth by the Dietary Flavonoid Fisetin Is Associated with Disruption of Wnt/β-Catenin Signaling and Decreased Mitf Levels

(2011) Deeba N. Syed et al.   JOURNAL OF INVESTIGATIVE DERMATOLOGY

Regulation of auxin response by miR393-targeted transport inhibitor response protein 1 is involved in normal development in Arabidopsis

(2011) Zhe-Hao Chen et al.   PLANT MOLECULAR BIOLOGY

Lignin content in natural Populus variants affects sugar release

(2011) M. H. Studer et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Metabolic and Signaling Aspects Underpinning the Regulation of Plant Carbon Nitrogen Interactions

(2010) Adriano Nunes-Nesi et al.   Molecular Plant

Nitrogen nutrition of poplar trees

(2010) H. Rennenberg et al.   PLANT BIOLOGY

Distinct signalling pathways and transcriptome response signatures differentiate ammonium- and nitrate-supplied plants

(2010) KURT PATTERSON et al.   PLANT CELL AND ENVIRONMENT

Nitrate-responsive miR393/AFB3 regulatory module controls root system architecture in Arabidopsis thaliana

(2010) E. A. Vidal et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The ‘trade-off’ between synthesis of primary and secondary compounds in young tomato leaves is altered by nitrate nutrition: experimental evidence and model consistency

(2009) Jacques Le Bot et al.   JOURNAL OF EXPERIMENTAL BOTANY

Combined application of high resolution and tandem mass spectrometers to characterize methionine oxidation in a parathyroid hormone formulation

(2009) Changkang Pan et al.   JOURNAL OF PHARMACEUTICAL SCIENCES

Metabolomic Screening Applied to Rice FOX Arabidopsis Lines Leads to the Identification of a Gene-Changing Nitrogen Metabolism

(2009) Doris Albinsky et al.   Molecular Plant

Metabolic profiling of maize mutants deficient for two glutamine synthetase isoenzymes using 1H-NMR-based metabolomics

(2009) Caroline Broyart et al.   PHYTOCHEMICAL ANALYSIS

Natural variation in Arabidopsis adaptation to growth at low nitrogen conditions

(2009) Kathryn Anne North et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

Auxin Receptors and Plant Development: A New Signaling Paradigm

(2008) Keithanne Mockaitis et al.   Annual Review of Cell and Developmental Biology

Roots, Nitrogen Transformations, and Ecosystem Services

(2008) Louise E. Jackson et al.   Annual Review of Plant Biology

Bioenergy from plants and the sustainable yield challenge

(2008) Angela Karp et al.   NEW PHYTOLOGIST

Adjustment of growth and central metabolism to a mild but sustained nitrogen-limitation inArabidopsis

(2008) HENDRIK TSCHOEP et al.   PLANT CELL AND ENVIRONMENT