Transcriptome-Guided Insights Into Plastic Degradation by the Marine Bacterium

A Novel Polyester Hydrolase From the Marine Bacterium Pseudomonas aestusnigri – Structural and Functional Insights

(2020) Alexander Bollinger et al.   Frontiers in Microbiology

Bacterial Candidates for Colonization and Degradation of Marine Plastic Debris

(2019) Line Roager et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Comparative genomics of Sphingopyxis spp. unravelled functional attributes

(2019) Helianthous Verma et al.   GENOMICS

Environmental fate and impacts of microplastics in soil ecosystems: Progress and perspective

(2019) Wenfeng Wang et al.   SCIENCE OF THE TOTAL ENVIRONMENT

ShinyGO: a graphical gene-set enrichment tool for animals and plants

(2019) Steven Xijin Ge et al.   BIOINFORMATICS

Comparative biodegradation study of polymer from plastic bottle waste using novel isolated bacteria and fungi from marine source

(2019) Rwiddhi Sarkhel et al.   JOURNAL OF POLYMER RESEARCH

Efficient biodegradation of highly crystallized polyethylene terephthalate through cell surface display of bacterial PETase

(2019) Zhuozhi Chen et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Use of rhizosphere microorganisms in the biodegradation of PLA and PET polymers in compost soil

(2018) Katarzyna Janczak et al.   INTERNATIONAL BIODETERIORATION & BIODEGRADATION

Biological Recycling of Polyethylene Terephthalate: A Mini-Review

(2018) Rupali Koshti et al.   JOURNAL OF POLYMERS AND THE ENVIRONMENT

Characterization and engineering of a plastic-degrading aromatic polyesterase

(2018) Harry P. Austin et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Destabilization of polyethylene and polyvinylchloride structure by marine bacterial strain

(2018) Alka Kumari et al.   ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH

Biodegradation of Microplastic Derived from Poly(ethylene terephthalate) with Bacterial Whole-Cell Biocatalysts

(2018) Jixian Gong et al.   Polymers

Transcriptomics and Lipidomics of the Environmental Strain Rhodococcus ruber Point out Consumption Pathways and Potential Metabolic Bottlenecks for Polyethylene Degradation

(2017) Kévin Gravouil et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Insights on the aerobic biodegradation of polymers by analysis of evolved carbon dioxide in simulated composting conditions

(2017) E. Castro-Aguirre et al.   POLYMER DEGRADATION AND STABILITY

A dual enzyme system composed of a polyester hydrolase and a carboxylesterase enhances the biocatalytic degradation of polyethylene terephthalate films

(2016) Markus Barth et al.   Biotechnology Journal

A bacterium that degrades and assimilates poly(ethylene terephthalate)

(2016) Shosuke Yoshida et al.   SCIENCE

A dual enzyme system composed of a polyester hydrolase and a carboxylesterase enhances the biocatalytic degradation of polyethylene terephthalate films

(2016) Markus Barth et al.   Biotechnology Journal

Induction of Viable but Nonculturable State in Rhodococcus and Transcriptome Analysis Using RNA-seq

(2016) Xiaomei Su et al.   PLoS One

Effect of hydrolysis products on the enzymatic degradation of polyethylene terephthalate nanoparticles by a polyester hydrolase from Thermobifida fusca

(2015) Markus Barth et al.   BIOCHEMICAL ENGINEERING JOURNAL

Hydrolysis of synthetic polyesters byClostridium botulinumesterases

(2015) Veronika Perz et al.   BIOTECHNOLOGY AND BIOENGINEERING

KEGG as a reference resource for gene and protein annotation

(2015) Minoru Kanehisa et al.   NUCLEIC ACIDS RESEARCH

Biodegradation of waste PET based copolyesters in thermophilic anaerobic sludge

(2015) Soňa Hermanová et al.   POLYMER DEGRADATION AND STABILITY

A novel Ca2+-activated, thermostabilized polyesterase capable of hydrolyzing polyethylene terephthalate from Saccharomonospora viridis AHK190

(2014) Fusako Kawai et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Biodegradation of low-density polyethylene by marine bacteria from pelagic waters, Arabian Sea, India

(2013) Kumar Harshvardhan et al.   MARINE POLLUTION BULLETIN

Low density polyethylene–chitosan composites: A study based on biodegradation

(2012) M. Sunilkumar et al.   CHEMICAL ENGINEERING JOURNAL

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks

(2012) Cole Trapnell et al.   Nature Protocols

NGS QC Toolkit: A Toolkit for Quality Control of Next Generation Sequencing Data

(2012) Ravi K. Patel et al.   PLoS One

A New Esterase from Thermobifida halotolerans Hydrolyses Polyethylene Terephthalate (PET) and Polylactic Acid (PLA)

(2012) Doris Ribitsch et al.   Polymers

Hydrolysis of polyethyleneterephthalate by p-nitrobenzylesterase from Bacillus subtilis

(2011) Doris Ribitsch et al.   BIOTECHNOLOGY PROGRESS

High-throughput microsatellite isolation through 454 GS-FLX Titanium pyrosequencing of enriched DNA libraries

(2011) THIBAUT MALAUSA et al.   Molecular Ecology Resources

Environmental and health hazard ranking and assessment of plastic polymers based on chemical composition

(2011) Delilah Lithner et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Cytoscape 2.8: new features for data integration and network visualization

(2010) M. E. Smoot et al.   BIOINFORMATICS

High-density polyethylene (HDPE)-degrading potential bacteria from marine ecosystem of Gulf of Mannar, India

(2010) V. Balasubramanian et al.   LETTERS IN APPLIED MICROBIOLOGY

The STRING database in 2011: functional interaction networks of proteins, globally integrated and scored

(2010) D. Szklarczyk et al.   NUCLEIC ACIDS RESEARCH

Biodegradability Evaluation of Polymers by ISO 14855-2

(2009) Masahiro Funabashi et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Applications and societal benefits of plastics

(2009) A. L. Andrady et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Biodegradability of biodegradable/degradable plastic materials under aerobic and anaerobic conditions

(2007) R. Mohee et al.   WASTE MANAGEMENT