The meta-gut: community coalescence of animal gut and environmental microbiomes

Alternative Biogeochemical States of River Pools Mediated by Hippo Use and Flow Variability

(2020) Christopher L. Dutton et al.   ECOSYSTEMS

The Microbiome Stress Project: Toward a Global Meta-Analysis of Environmental Stressors and Their Effects on Microbial Communities

(2019) Jennifer D. Rocca et al.   Frontiers in Microbiology

Bacteria and archaea on Earth and their abundance in biofilms

(2019) Hans-Curt Flemming et al.   NATURE REVIEWS MICROBIOLOGY

Application of the microbial community coalescence concept to riverine networks

(2018) India Mansour et al.   BIOLOGICAL REVIEWS

Freshwater megafauna diversity: Patterns, status and threats

(2018) Fengzhi He et al.   DIVERSITY AND DISTRIBUTIONS

Effects of the hippopotamus on the chemistry and ecology of a changing watershed

(2018) Keenan Stears et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Organic matter loading by hippopotami causes subsidy overload resulting in downstream hypoxia and fish kills

(2018) Christopher L. Dutton et al.   Nature Communications

The Gut Microbiota of Marine Fish

(2018) Sian Egerton et al.   Frontiers in Microbiology

Context dependency of animal resource subsidies

(2018) Amanda L. Subalusky et al.   BIOLOGICAL REVIEWS

Organic matter and nutrient inputs from large wildlife influence ecosystem function in the Mara River, Africa

(2018) Amanda L. Subalusky et al.   ECOLOGY

Assessment and verification of commercially available pressure cookers for laboratory sterilization

(2018) Vaille A. Swenson et al.   PLoS One

Animals and the zoogeochemistry of the carbon cycle

(2018) Oswald J. Schmitz et al.   SCIENCE

Simple statistical identification and removal of contaminant sequences in marker-gene and metagenomics data

(2018) Nicole M. Davis et al.   Microbiome

Consumer-driven nutrient dynamics in freshwater ecosystems: from individuals to ecosystems

(2016) Carla L. Atkinson et al.   BIOLOGICAL REVIEWS

Species sorting along a subsidy gradient alters bacterial community stability

(2016) Mario E. Muscarella et al.   ECOLOGY

DADA2: High-resolution sample inference from Illumina amplicon data

(2016) Benjamin J Callahan et al.   NATURE METHODS

Megafauna and ecosystem function from the Pleistocene to the Anthropocene

(2016) Yadvinder Malhi et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Are Large Herbivores Vectors of Terrestrial Subsidies for Riverine Food Webs?

(2015) Frank O. Masese et al.   ECOSYSTEMS

Carnivory in the common hippopotamusHippopotamus amphibius: implications for the ecology and epidemiology of anthrax in African landscapes

(2015) Joseph P. Dudley et al.   MAMMAL REVIEW

Interchange of entire communities: microbial community coalescence

(2015) Matthias C. Rillig et al.   TRENDS IN ECOLOGY & EVOLUTION

Carbon stable isotopes suggest that hippopotamus-vectored nutrients subsidize aquatic consumers in an East African river

(2015) Douglas J. McCauley et al.   Ecosphere

The hippopotamus conveyor belt: vectors of carbon and nutrients from terrestrial grasslands to aquatic systems in sub-Saharan Africa

(2014) Amanda L. Subalusky et al.   FRESHWATER BIOLOGY

Development of a Dual-Index Sequencing Strategy and Curation Pipeline for Analyzing Amplicon Sequence Data on the MiSeq Illumina Sequencing Platform

(2013) James J. Kozich et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Evaluating rRNA as an indicator of microbial activity in environmental communities: limitations and uses

(2013) Steven J Blazewicz et al.   ISME Journal

phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data

(2013) Paul J. McMurdie et al.   PLoS One

The impact of large animal extinctions on nutrient fluxes in early river valley civilizations

(2013) Christopher E. Doughty et al.   Ecosphere

Virus-driven nitrogen cycling enhances phytoplankton growth

(2012) EJ Shelford et al.   AQUATIC MICROBIAL ECOLOGY

Environmental and ecological factors that shape the gut bacterial communities of fish: a meta-analysis

(2012) KAREN E. SULLAM et al.   MOLECULAR ECOLOGY

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

Review of wallowing in pigs: Description of the behaviour and its motivational basis

(2011) M.B.M. Bracke   APPLIED ANIMAL BEHAVIOUR SCIENCE

Macellibacteroides fermentans gen. nov., sp. nov., a member of the family Porphyromonadaceae isolated from an upflow anaerobic filter treating abattoir wastewaters

(2011) L. Jabari et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Hippopotamus and livestock grazing: influences on riparian vegetation and facilitation of other herbivores in the Mara Region of Kenya

(2011) Erustus M. Kanga et al.   Landscape and Ecological Engineering

Mussel farming as a nutrient reduction measure in the Baltic Sea: Consideration of nutrient biogeochemical cycles

(2011) J. Stadmark et al.   MARINE POLLUTION BULLETIN

Bayesian community-wide culture-independent microbial source tracking

(2011) Dan Knights et al.   NATURE METHODS

Population trend and distribution of the Vulnerable common hippopotamus Hippopotamus amphibius in the Mara Region of Kenya

(2011) Erustus M. Kanga et al.   ORYX

Linking Long-Term Dietary Patterns with Gut Microbial Enterotypes

(2011) G. D. Wu et al.   SCIENCE

Metagenomic biomarker discovery and explanation

(2011) Nicola Segata et al.   GENOME BIOLOGY

Ecosystem Consequences of Biological Invasions

(2010) Joan G. Ehrenfeld   Annual Review of Ecology Evolution and Systematics

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Dormancy contributes to the maintenance of microbial diversity

(2010) S. E. Jones et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Community and foodweb ecology of freshwater mussels

(2008) Caryn C. Vaughn et al.   JOURNAL OF THE NORTH AMERICAN BENTHOLOGICAL SOCIETY

Identifying Aquatic Habits Of Herbivorous Mammals Through Stable Isotope Analysis

(2008) M. T. Clementz et al.   PALAIOS

The Microbial Engines That Drive Earth's Biogeochemical Cycles

(2008) P. G. Falkowski et al.   SCIENCE