The response of sediment microbial communities to temporal and site-specific variations of pollution in interconnected aquaculture pond and ditch systems

Heavy metal pollution in urban river sediment of different urban functional areas and its influence on microbial community structure

(2021) Feng Wang et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Bacterial Communities and Enzymatic Activities in Sediments of Long-Term Fish and Crab Aquaculture Ponds

(2021) Zhimin Zhang et al.   Microorganisms

Geochemical partitioning and possible heavy metal(loid) bioaccumulation within aquaculture shrimp ponds

(2021) Matthew Dietrich et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Stochastic processes shape the bacterial community assembly in shrimp cultural pond sediments

(2021) Dongwei Hou et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Deep insight into bacterial community characterization and relationship in the pond water, sediment and the gut of shrimp (Penaeus japonicus)

(2021) Li Zhou et al.   AQUACULTURE

Metatranscriptomic insights of the metabolic process enhancement during food wastes fermentation driven by linear alkylbenzene sulphonates

(2021) Jingyang Luo et al.   Journal of Cleaner Production

Sediment microbiota in polyculture of shrimp and fish pattern is distinctive from those in monoculture intensive shrimp or fish ponds

(2021) Shenzheng Zeng et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Integrated data-driven strategy to optimize the processes configuration for full-scale wastewater treatment plant predesign

(2021) Runze Xu et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Functional analysis of pristine estuarine marine sediments

(2021) Rohan M. Shah et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Effects of iron-carbon materials on microbial-catalyzed reductive dechlorination of polychlorinated biphenyls in Taihu Lake sediment microcosms: Enhanced chlorine removal, detoxification and shifts of microbial community

(2021) Yan Xu et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Temporal dynamics of bacterial communities in the water and sediments of sea cucumber (Apostichopus japonicus) culture ponds

(2020) Zelong Zhao et al.   AQUACULTURE

Comparative analysis of microbial community structure in the ponds with different aquaculture model and fish by high-throughput sequencing

(2020) Zhigang Liu et al.   MICROBIAL PATHOGENESIS

Survey of dissimilatory nitrate reduction to ammonium microbial community at national wetland of Shanghai, China

(2020) Yiyi Zhao et al.   CHEMOSPHERE

Effects of heavy metals on microbial communities in sediments and establishment of bioindicators based on microbial taxa and function for environmental monitoring and management

(2020) Changchao Li et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Accelerated nitrogen consumption in sediment by Tubifex tubifex and its significance in eutrophic sediment remediation

(2020) Jiqiang Yang et al.   ENVIRONMENTAL POLLUTION

Bioaccumulation and distribution pattern of heavy metals in aquaculture systems found in Arusha and Morogoro regions of Tanzania

(2020) Frida Nyamete et al.   INTERNATIONAL JOURNAL OF ENVIRONMENTAL ANALYTICAL CHEMISTRY

Community diversity and abundance of ammonia‐oxidizing archaea and bacteria in shrimp pond sediment at different culture stages

(2020) D. Wei et al.   JOURNAL OF APPLIED MICROBIOLOGY

Spatiotemporal variations and source tracking of antibiotics in an ecological aquaculture farm in Southern China

(2020) Haochang Su et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Bacterial assembly during the initial adhesion phase in wastewater treatment biofilms

(2020) Qiuju Liu et al.   WATER RESEARCH

Successional Dynamics of Molecular Ecological Network of Anammox Microbial Communities under Elevated Salinity

(2020) Tao Ya et al.   WATER RESEARCH

Habitat and seasonal variations in bacterial community structure and diversity in sediments of a Shallow lake

(2020) Yujun Yi et al.   ECOLOGICAL INDICATORS

Integrated remediation of sulfate reducing bacteria and nano zero valent iron on cadmium contaminated sediments

(2020) Qing Zhao et al.   JOURNAL OF HAZARDOUS MATERIALS

A preliminary metatranscriptomic insight of eggshells conditioning on substrates metabolism during food wastes anaerobic fermentation

(2020) Jingyang Luo et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Enhanced remediation of BDE-209 in contaminated mangrove sediment by planting and aquaculture effluent

(2020) Shazia Farzana et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Microbial communities in sea cucumber (Apostichopus japonicus ) culture pond and the effects of environmental factors

(2019) Hanchen Xu et al.   AQUACULTURE RESEARCH

Bacterial assembly in the bio-cake of membrane bioreactors: Stochastic vs. deterministic processes

(2019) Ronghua Xu et al.   WATER RESEARCH

Bacterial community assemblages in sediments under high anthropogenic pressure at Ichkeul Lake/Bizerte Lagoon hydrological system, Tunisia

(2019) Fida Ben Salem et al.   ENVIRONMENTAL POLLUTION

Microcystins distribution, bioaccumulation, and Microcystis genotype succession in a fish culture pond

(2019) Xiangdong Bi et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Prevalence and distribution analysis of antibiotic resistance genes in a large-scale aquaculture environment

(2019) Xiaoxiao Shen et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Integrating high-throughput sequencing and metagenome analysis to reveal the characteristic and resistance mechanism of microbial community in metal contaminated sediments

(2019) Changchun Yan et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Biological denitrification in marine aquaculture systems: A multiple electron donor microcosm study

(2018) Qiaochong He et al.   BIORESOURCE TECHNOLOGY

Vermicomposting of sludge from recirculating aquaculture system using Eisenia andrei : Technological feasibility and quality assessment of end-products

(2018) Antonín Kouba et al.   JOURNAL OF CLEANER PRODUCTION

Sediment bacteria in an urban stream: Spatiotemporal patterns in community composition

(2018) Alescia A. Roberto et al.   WATER RESEARCH

Predicting long term removal of heavy metals from porous pavements for stormwater treatment

(2018) Kefeng Zhang et al.   WATER RESEARCH

Effect of in situ sediment remediation combining oyster shells and bottom microporous aeration on nitrogen removal and microbiota

(2018) Miao Wang et al.   AQUACULTURE RESEARCH

Taxonomic and Functional Metagenomic Profile of Sediment From a Commercial Catfish Pond in Mississippi

(2018) Seong Won Nho et al.   Frontiers in Microbiology

Biological treatment of actual petrochemical wastewater using anaerobic/anoxic/oxic process and the microbial diversity analysis

(2016) Pengyuan Ding et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Bacterial communities in water and sediment shaped by paper mill pollution and indicated bacterial taxa in sediment in Daling River

(2016) Jianguo Guo et al.   ECOLOGICAL INDICATORS

The interconnected rhizosphere: High network complexity dominates rhizosphere assemblages

(2016) Shengjing Shi et al.   ECOLOGY LETTERS

Long-term successional dynamics of microbial association networks in anaerobic digestion processes

(2016) Linwei Wu et al.   WATER RESEARCH

Network succession reveals the importance of competition in response to emulsified vegetable oil amendment for uranium bioremediation

(2015) Ye Deng et al.   ENVIRONMENTAL MICROBIOLOGY

Use of vegetated drainage ditches and low-grade weirs for aquaculture effluent mitigation: I. Nutrients

(2014) Corrin Flora et al.   AQUACULTURAL ENGINEERING

Diversity of Interaction Types and Ecological Community Stability

(2012) A. Mougi et al.   SCIENCE

Microbial diversity in the sediment of a crab pond in Nanjing, China

(2011) Yuchun Liu et al.   AQUACULTURE RESEARCH

An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea

(2011) Daniel McDonald et al.   ISME Journal

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY