In silico recognition of a prognostic signature in basal-like breast cancer patients
Published 2022 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
In silico recognition of a prognostic signature in basal-like breast cancer patients
Authors
Keywords
DNA methylation, Biomarkers, Breast cancer, Transcription factors, Prognosis, Cancers and neoplasms, Malignant tumors, Survival analysis
Journal
PLoS One
Volume 17, Issue 2, Pages e0264024
Publisher
Public Library of Science (PLoS)
Online
2022-02-16
DOI
10.1371/journal.pone.0264024
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Gene co-expression in the interactome: moving from correlation toward causation via an integrated approach to disease module discovery
- (2021) Paola Paci et al. npj Systems Biology and Applications
- miRNA-Based Therapeutics in Breast Cancer: A Systematic Review
- (2021) Anna Maria Grimaldi et al. Frontiers in Oncology
- GINS4, a prognostic biomarker and reversely mediated by KLF4, promotes the growth of colorectal cancer
- (2020) Zeyin Rong et al. CANCER SCIENCE
- Integrated transcriptomic correlation network analysis identifies COPD molecular determinants
- (2020) Paola Paci et al. Scientific Reports
- Sensitivity to differential NRF1 gene signatures contributes to breast cancer disparities
- (2020) Jairo Ramos et al. JOURNAL OF CANCER RESEARCH AND CLINICAL ONCOLOGY
- The New Paradigm of Network Medicine to Analyze Breast Cancer Phenotypes
- (2020) Anna Maria Grimaldi et al. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
- PD-L1-mediated gasdermin C expression switches apoptosis to pyroptosis in cancer cells and facilitates tumour necrosis
- (2020) Junwei Hou et al. NATURE CELL BIOLOGY
- PRAME promotes epithelial-to-mesenchymal transition in triple negative breast cancer
- (2019) Ghaneya Al-Khadairi et al. Journal of Translational Medicine
- Network-based approach to prediction and population-based validation of in silico drug repurposing
- (2018) Feixiong Cheng et al. Nature Communications
- Global cancer statistics 2018: GLOBOCAN estimates of incidence and mortality worldwide for 36 cancers in 185 countries
- (2018) Freddie Bray et al. CA-A CANCER JOURNAL FOR CLINICIANS
- Targeting LRP8 inhibits breast cancer stem cells in triple-negative breast cancer
- (2018) Chang-Ching Lin et al. CANCER LETTERS
- Overexpression of CDCA7 predicts poor prognosis and induces EZH2-mediated progression of triple-negative breast cancer
- (2018) Liping Ye et al. INTERNATIONAL JOURNAL OF CANCER
- Genetics and Expression Profile of the Tubulin Gene Superfamily in Breast Cancer Subtypes and Its Relation to Taxane Resistance
- (2018) Babak Nami et al. Cancers
- SWIM tool application to expression data of glioblastoma stem-like cell lines, corresponding primary tumors and conventional glioma cell lines
- (2018) Giulia Fiscon et al. BMC BIOINFORMATICS
- Estimating the global cancer incidence and mortality in 2018: GLOBOCAN sources and methods
- (2018) J. Ferlay et al. INTERNATIONAL JOURNAL OF CANCER
- LRP8 is overexpressed in estrogen-negative breast cancers and a potential target for these tumors
- (2018) Virginie Maire et al. Cancer Medicine
- TRRUST v2: an expanded reference database of human and mouse transcriptional regulatory interactions
- (2017) Heonjong Han et al. NUCLEIC ACIDS RESEARCH
- JASPAR 2018: update of the open-access database of transcription factor binding profiles and its web framework
- (2017) Aziz Khan et al. NUCLEIC ACIDS RESEARCH
- Oncogene TUBA1C promotes migration and proliferation in hepatocellular carcinoma and predicts a poor prognosis
- (2017) Ji Wang et al. Oncotarget
- DNA Methylation in Cancer and Aging
- (2016) M. Klutstein et al. CANCER RESEARCH
- PRAME is critical for breast cancer growth and metastasis
- (2016) Zhengwang Sun et al. GENE
- Inhibition of fatty acid oxidation as a therapy for MYC-overexpressing triple-negative breast cancer
- (2016) Roman Camarda et al. NATURE MEDICINE
- New insights into the prognostic value of Ki-67 labeling index in patients with triple-negative breast cancer
- (2016) Shuang Hao et al. Oncotarget
- Regulation of SLD5 gene expression by miR-370 during acute growth of cancer cells
- (2016) Keitaro Yamane et al. Scientific Reports
- Gasdermin C Is Upregulated by Inactivation of Transforming Growth Factor β Receptor Type II in the Presence of Mutated Apc, Promoting Colorectal Cancer Proliferation
- (2016) Masashi Miguchi et al. PLoS One
- Interaction between smoking history and gene expression levels impacts survival of breast cancer patients
- (2015) Sarah A. Andres et al. BREAST CANCER RESEARCH AND TREATMENT
- Minfi: a flexible and comprehensive Bioconductor package for the analysis of Infinium DNA methylation microarrays
- (2014) Martin J. Aryee et al. BIOINFORMATICS
- IGF-I Regulates Redox Status in Breast Cancer Cells by Activating the Amino Acid Transport Molecule xC−
- (2014) Yuzhe Yang et al. CANCER RESEARCH
- Integrated Network Analysis Identifies Fight-Club Nodes as a Class of Hubs Encompassing Key Putative Switch Genes That Induce Major Transcriptome Reprogramming during Grapevine Development
- (2014) Maria Concetta Palumbo et al. PLANT CELL
- Personalizing the treatment of women with early breast cancer: highlights of the St Gallen International Expert Consensus on the Primary Therapy of Early Breast Cancer 2013
- (2013) A. Goldhirsch et al. ANNALS OF ONCOLOGY
- Comparison of basal-like triple-negative breast cancer defined by morphology, immunohistochemistry and transcriptional profiles
- (2013) Patrycja Gazinska et al. MODERN PATHOLOGY
- The Cancer Genome Atlas Pan-Cancer analysis project
- (2013) John N Weinstein et al. NATURE GENETICS
- Molecular Characterization of Basal-Like and Non-Basal-Like Triple-Negative Breast Cancer
- (2013) A. Prat et al. ONCOLOGIST
- Prognostic value of Ki-67 labeling index in patients with node-negative, triple-negative breast cancer
- (2012) Elisabetta Munzone et al. BREAST CANCER RESEARCH AND TREATMENT
- Clinicopathologic features, patterns of recurrence, and survival among women with triple-negative breast cancer in the National Comprehensive Cancer Network
- (2012) Nancy U. Lin et al. CANCER
- The landscape of cancer genes and mutational processes in breast cancer
- (2012) Philip J. Stephens et al. NATURE
- Comprehensive molecular portraits of human breast tumours
- (2012) Daniel C. Koboldt et al. NATURE
- Antibodies for profiling the human proteome-The Human Protein Atlas as a resource for cancer research
- (2012) Anna Asplund et al. PROTEOMICS
- Cyclopentenyl Cytosine Induces Senescence in Breast Cancer Cells through the Nucleolar Stress Response and Activation of p53
- (2011) M. Huang et al. MOLECULAR PHARMACOLOGY
- International Cancer Genome Consortium Data Portal--a one-stop shop for cancer genomics data
- (2011) J. Zhang et al. Database-The Journal of Biological Databases and Curation
- GISTIC2.0 facilitates sensitive and confident localization of the targets of focal somatic copy-number alteration in human cancers
- (2011) Craig H Mermel et al. GENOME BIOLOGY
- Basal-like and triple-negative breast cancers: a critical review with an emphasis on the implications for pathologists and oncologists
- (2010) Sunil Badve et al. MODERN PATHOLOGY
- Minireview: Basal-Like Breast Cancer: From Molecular Profiles to Targeted Therapies
- (2010) Daniel J. Toft et al. MOLECULAR ENDOCRINOLOGY
- A practical guide to understanding Kaplan-Meier curves
- (2010) Jason T. Rich et al. OTOLARYNGOLOGY-HEAD AND NECK SURGERY
- An online survival analysis tool to rapidly assess the effect of 22,277 genes on breast cancer prognosis using microarray data of 1,809 patients
- (2009) Balazs Györffy et al. BREAST CANCER RESEARCH AND TREATMENT
- Supervised Risk Predictor of Breast Cancer Based on Intrinsic Subtypes
- (2009) Joel S. Parker et al. JOURNAL OF CLINICAL ONCOLOGY
- Pscan: finding over-represented transcription factor binding site motifs in sequences from co-regulated or co-expressed genes
- (2009) Federico Zambelli et al. NUCLEIC ACIDS RESEARCH
- PRAME expression and clinical outcome of breast cancer
- (2008) M T Epping et al. BRITISH JOURNAL OF CANCER
- Impact of Basal-Like Breast Carcinoma Determination for a More Specific Therapy
- (2008) Emad A. Rakha et al. PATHOBIOLOGY
Discover Peeref hubs
Discuss science. Find collaborators. Network.
Join a conversationAsk a Question. Answer a Question.
Quickly pose questions to the entire community. Debate answers and get clarity on the most important issues facing researchers.
Get Started