Exploring the Possible Link between the Gut Microbiome and Fat Deposition in Pigs

Advances in Understanding of the Role of Lipid Metabolism in Aging

(2021) Ki Wung Chung   Cells

Research Progress on Oxidative Stress and Its Nutritional Regulation Strategies in Pigs

(2021) Yue Hao et al.   Animals

Comparison of Digestive Enzyme Activities and Expression of Small Intestinal Transporter Genes in Jinhua and Landrace Pigs

(2021) Xiuting Liu et al.   Frontiers in Physiology

Multi-omics reveals that the rumen microbiome and its metabolome together with the host metabolome contribute to individualized dairy cow performance

(2020) Ming-Yuan Xue et al.   Microbiome

Novel Insights into Adipogenesis from the Perspective of Transcriptional and RNA N6‐Methyladenosine‐Mediated Post‐Transcriptional Regulation

(2020) Tongxing Song et al.   Advanced Science

Exploring the Fecal Microbial Composition and Metagenomic Functional Capacities Associated With Feed Efficiency in Commercial DLY Pigs

(2019) Jianping Quan et al.   Frontiers in Microbiology

Biomarkers of oxidative stress in saliva in pigs: analytical validation and changes in lactation

(2019) Camila Peres Rubio et al.   BMC Veterinary Research

Magic-BLAST, an accurate RNA-seq aligner for long and short reads

(2019) Grzegorz M. Boratyn et al.   BMC BIOINFORMATICS

Dietary Fiber in Bilberry Ameliorates Pre-Obesity Events in Rats by Regulating Lipid Depot, Cecal Short-Chain Fatty Acid Formation and Microbiota Composition

(2019) Hao-Yu Liu et al.   Nutrients

Microbiota Composition and Functional Profiling Throughout the Gastrointestinal Tract of Commercial Weaning Piglets

(2019) Gresse et al.   Microorganisms

Differential expression of mRNA isoforms in the skeletal muscle of pigs with distinct growth and fatness profiles

(2018) Tainã Figueiredo Cardoso et al.   BMC GENOMICS

Core gut microbiota in Jinhua pigs and its correlation with strain, farm and weaning age

(2018) Hua Yang et al.   JOURNAL OF MICROBIOLOGY

Comparative biogeography of the gut microbiome between Jinhua and Landrace pigs

(2018) Yingping Xiao et al.   Scientific Reports

Alfalfa-containing diets alter luminal microbiota structure and short chain fatty acid sensing in the caecal mucosa of pigs

(2018) Jiawei Wang et al.   Journal of Animal Science and Biotechnology

The gut microbiota drives the impact of bile acids and fat source in diet on mouse metabolism

(2018) Sarah Just et al.   Microbiome

Gut Microbiota Is a Major Contributor to Adiposity in Pigs

(2018) Hua Yang et al.   Frontiers in Microbiology

Complex pectin metabolism by gut bacteria reveals novel catalytic functions

(2017) Didier Ndeh et al.   NATURE

Salmon provides fast and bias-aware quantification of transcript expression

(2017) Rob Patro et al.   NATURE METHODS

Structural changes of gut microbiota in Parkinson’s disease and its correlation with clinical features

(2017) Wei Li et al.   Science China-Life Sciences

Structural Analysis of a Family 81 Glycoside Hydrolase Implicates Its Recognition of β-1,3-Glucan Quaternary Structure

(2017) Benjamin Pluvinage et al.   STRUCTURE

Association of growth rate with hormone levels and myogenic gene expression profile in broilers

(2017) Yingping Xiao et al.   Journal of Animal Science and Biotechnology

Gestational dietary betaine supplementation suppresses hepatic expression of lipogenic genes in neonatal piglets through epigenetic and glucocorticoid receptor-dependent mechanisms

(2016) Demin Cai et al.   BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR AND CELL BIOLOGY OF LIPIDS

Uncovering the composition of microbial community structure and metagenomics among three gut locations in pigs with distinct fatness

(2016) Hui Yang et al.   Scientific Reports

Evidence for a Boat Conformation at the Transition State of GH76 α-1,6-Mannanases-Key Enzymes in Bacterial and Fungal Mannoprotein Metabolism

(2015) Andrew J. Thompson et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

MEGAHIT: an ultra-fast single-node solution for large and complex metagenomics assembly via succinct de Bruijn graph

(2015) Dinghua Li et al.   BIOINFORMATICS

Fermentable non-starch polysaccharides increases the abundance of Bacteroides–Prevotella–Porphyromonas in ileal microbial community of growing pigs

(2014) E. Ivarsson et al.   Animal

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

Oxidative Stress in Obesity: A Critical Component in Human Diseases

(2014) Lucia Marseglia et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

The carbohydrate-active enzymes database (CAZy) in 2013

(2013) Vincent Lombard et al.   NUCLEIC ACIDS RESEARCH

Identification of genes regulating growth and fatness traits in pig through hypothalamic transcriptome analysis

(2013) Dafne Pérez-Montarelo et al.   PHYSIOLOGICAL GENOMICS

Distinctive Genes Determine Different Intramuscular Fat and Muscle Fiber Ratios of the longissimus dorsi Muscles in Jinhua and Landrace Pigs

(2013) Ting Wu et al.   PLoS One

Gut Microbiota from Twins Discordant for Obesity Modulate Metabolism in Mice

(2013) V. K. Ridaura et al.   SCIENCE

Oxidative stress induces gastric submucosal arteriolar dysfunction in the elderly

(2013) Lei Liu   WORLD JOURNAL OF GASTROENTEROLOGY

Gene and translation initiation site prediction in metagenomic sequences

(2012) Doug Hyatt et al.   BIOINFORMATICS

Oxidative stress and liver disease

(2012) Runzhi Zhu et al.   HEPATOLOGY RESEARCH

Lean Breed Landrace Pigs Harbor Fecal Methanogens at Higher Diversity and Density than Obese Breed Erhualian Pigs

(2012) Yu-heng Luo et al.   ARCHAEA-AN INTERNATIONAL MICROBIOLOGICAL JOURNAL

Prebiotic Effects of Wheat Arabinoxylan Related to the Increase in Bifidobacteria, Roseburia and Bacteroides/Prevotella in Diet-Induced Obese Mice

(2011) Audrey M. Neyrinck et al.   PLoS One

Metagenomic systems biology of the human gut microbiome reveals topological shifts associated with obesity and inflammatory bowel disease

(2011) S. Greenblum et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Metabolic activity of the enteric microbiota influences the fatty acid composition of murine and porcine liver and adipose tissues

(2009) Rebecca Wall et al.   AMERICAN JOURNAL OF CLINICAL NUTRITION

SOAP: short oligonucleotide alignment program

(2008) R. Li et al.   BIOINFORMATICS