Database Resources of the National Genomics Data Center, China National Center for Bioinformation in 2022

SorGSD: updating and expanding the sorghum genome science database with new contents and tools

(2021) Yuanming Liu et al.   Biotechnology for Biofuels

Highly accurate protein structure prediction with AlphaFold

(2021) John Jumper et al.   NATURE

iSheep: an Integrated Resource for Sheep Genome, Variant and Phenotype

(2021) Zhong-Huang Wang et al.   Frontiers in Genetics

The Genome Sequence Archive Family: Toward Explosive Data Growth and Diverse Data Types

(2021) Tingting Chen et al.   GENOMICS PROTEOMICS & BIOINFORMATICS

Genome Warehouse: A Public Repository Housing Genome-scale Data

(2021) Meili Chen et al.   GENOMICS PROTEOMICS & BIOINFORMATICS

Gene Expression Nebulas (GEN): a comprehensive data portal integrating transcriptomic profiles across multiple species at both bulk and single-cell levels

(2021) Yuansheng Zhang et al.   NUCLEIC ACIDS RESEARCH

scMethBank: a database for single-cell whole genome DNA methylation maps

(2021) Wenting Zong et al.   NUCLEIC ACIDS RESEARCH

LncRNAWiki 2.0: a knowledgebase of human long non-coding RNAs with enhanced curation model and database system

(2021) Lin Liu et al.   NUCLEIC ACIDS RESEARCH

EWAS Open Platform: integrated data, knowledge and toolkit for epigenome-wide association study

(2021) Zhuang Xiong et al.   NUCLEIC ACIDS RESEARCH

A dynamic nomenclature proposal for SARS-CoV-2 lineages to assist genomic epidemiology

(2020) Andrew Rambaut et al.   Nature Microbiology

The Global Landscape of SARS-CoV-2 Genomes, Variants, and Haplotypes in 2019nCoVR

(2020) Shuhui Song et al.   GENOMICS PROTEOMICS & BIOINFORMATICS

Open resource of clinical data from patients with pneumonia for the prediction of COVID-19 outcomes via deep learning

(2020) Wanshan Ning et al.   Nature Biomedical Engineering

Characterization and identification of long non-coding RNAs based on feature relationship

(2019) Guangyu Wang et al.   BIOINFORMATICS

The EMBL-EBI search and sequence analysis tools APIs in 2019

(2019) Fábio Madeira et al.   NUCLEIC ACIDS RESEARCH

GWAS Atlas: a curated resource of genome-wide variant-trait associations in plants and animals

(2019) Dongmei Tian et al.   NUCLEIC ACIDS RESEARCH

EWAS Data Hub: a resource of DNA methylation array data and metadata

(2019) Zhuang Xiong et al.   NUCLEIC ACIDS RESEARCH

Single-cell RNA sequencing for the study of development, physiology and disease

(2018) S. Steven Potter   Nature Reviews Nephrology

EWAS Atlas: a curated knowledgebase of epigenome-wide association studies

(2018) Mengwei Li et al.   NUCLEIC ACIDS RESEARCH

Database Resources of the BIG Data Center in 2019

(2018) et al.   NUCLEIC ACIDS RESEARCH

Plant editosome database: a curated database of RNA editosome in plants

(2018) Man Li et al.   NUCLEIC ACIDS RESEARCH

Editome Disease Knowledgebase (EDK): a curated knowledgebase of editome-disease associations in human

(2018) Guangyi Niu et al.   NUCLEIC ACIDS RESEARCH

piRBase: a comprehensive database of piRNA sequences

(2018) Jiajia Wang et al.   NUCLEIC ACIDS RESEARCH

iDog: an integrated resource for domestic dogs and wild canids

(2018) Bixia Tang et al.   NUCLEIC ACIDS RESEARCH

MethBank 3.0: a database of DNA methylomes across a variety of species

(2017) Rujiao Li et al.   NUCLEIC ACIDS RESEARCH

OUP accepted manuscript

(2017)   NUCLEIC ACIDS RESEARCH

ICG: a wiki-driven knowledgebase of internal control genes for RT-qPCR normalization

(2017) Jian Sang et al.   NUCLEIC ACIDS RESEARCH

Towards PubMed 2.0

(2017) Nicolas Fiorini et al.   eLife

GSA: Genome Sequence Archive *

(2017) Yanqing Wang et al.   GENOMICS PROTEOMICS & BIOINFORMATICS

The BIG Data Center: from deposition to integration to translation

(2016)   NUCLEIC ACIDS RESEARCH

Advances and Applications of Single-Cell Sequencing Technologies

(2015) Yong Wang et al.   MOLECULAR CELL

MethBank: a database integrating next-generation sequencing single-base-resolution DNA methylation programming data

(2014) Dong Zou et al.   NUCLEIC ACIDS RESEARCH

LncRNAWiki: harnessing community knowledge in collaborative curation of human long non-coding RNAs

(2014) Lina Ma et al.   NUCLEIC ACIDS RESEARCH

CVTree update: a newly designed phylogenetic study platform using composition vectors and whole genomes

(2009) Z. Xu et al.   NUCLEIC ACIDS RESEARCH