Machine learning prediction of cognition from functional connectivity: Are feature weights reliable?

Deep learning encodes robust discriminative neuroimaging representations to outperform standard machine learning

(2021) Anees Abrol et al.   Nature Communications

Distinct functional and structural connections predict crystallised and fluid cognition in healthy adults

(2021) Elvisha Dhamala et al.   HUMAN BRAIN MAPPING

Resample aggregating improves the generalizability of connectome predictive modeling

(2021) David O'Connor et al.   NEUROIMAGE

Movie-watching outperforms rest for functional connectivity-based prediction of behavior

(2021) Emily S. Finn et al.   NEUROIMAGE

A guide to the measurement and interpretation of fMRI test-retest reliability

(2021) Stephanie Noble et al.   Current Opinion in Behavioral Sciences

Beyond fingerprinting: Choosing predictive connectomes over reliable connectomes

(2021) Emily S. Finn et al.   NEUROIMAGE

Neuroimaging-based Individualized Prediction of Cognition and Behavior for Mental Disorders and Health: Methods and Promises

(2020) Jing Sui et al.   BIOLOGICAL PSYCHIATRY

Optimising network modelling methods for fMRI

(2020) Usama Pervaiz et al.   NEUROIMAGE

Brain-predicted age associates with psychopathology dimensions in youth

(2020) Vanessa L. Cropley et al.   Biological Psychiatry-Cognitive Neuroscience and Neuroimaging

Topographic organization of the human subcortex unveiled with functional connectivity gradients

(2020) Ye Tian et al.   NATURE NEUROSCIENCE

Different scaling of linear models and deep learning in UKBiobank brain images versus machine-learning datasets

(2020) Marc-Andre Schulz et al.   Nature Communications

Boost in Test–Retest Reliability in Resting State fMRI with Predictive Modeling

(2020) Aman Taxali et al.   CEREBRAL CORTEX

Gender Differences in Connectome-based Predictions of Individualized Intelligence Quotient and Sub-domain Scores

(2019) Rongtao Jiang et al.   CEREBRAL CORTEX

Resting brain dynamics at different timescales capture distinct aspects of human behavior

(2019) Raphaël Liégeois et al.   Nature Communications

Global signal regression strengthens association between resting-state functional connectivity and behavior

(2019) Jingwei Li et al.   NEUROIMAGE

Deep neural networks and kernel regression achieve comparable accuracies for functional connectivity prediction of behavior and demographics

(2019) Tong He et al.   NEUROIMAGE

Task-induced brain connectivity promotes the detection of individual differences in brain-behavior relationships

(2019) Rongtao Jiang et al.   NEUROIMAGE

Neural computations underlying strategic social decision-making in groups

(2019) Seongmin A. Park et al.   Nature Communications

Neuroimaging-based prediction of mental traits: Road to utopia or Orwell?

(2019) Simon B. Eickhoff et al.   PLOS BIOLOGY

Establishment of Best Practices for Evidence for Prediction

(2019) Russell A. Poldrack et al.   JAMA Psychiatry

A decade of test-retest reliability of functional connectivity: A systematic review and meta-analysis

(2019) Stephanie Noble et al.   NEUROIMAGE

Spatial Topography of Individual-Specific Cortical Networks Predicts Human Cognition, Personality, and Emotion

(2018) Ru Kong et al.   CEREBRAL CORTEX

Connectome-based Models Predict Separable Components of Attention in Novel Individuals

(2018) Monica D. Rosenberg et al.   JOURNAL OF COGNITIVE NEUROSCIENCE

The effect of machine learning regression algorithms and sample size on individualized behavioral prediction with functional connectivity features

(2018) Zaixu Cui et al.   NEUROIMAGE

Functional Brain Networks Are Dominated by Stable Group and Individual Factors, Not Cognitive or Daily Variation

(2018) Caterina Gratton et al.   NEURON

Prediction complements explanation in understanding the developing brain

(2018) Monica D. Rosenberg et al.   Nature Communications

Task-induced brain state manipulation improves prediction of individual traits

(2018) Abigail S. Greene et al.   Nature Communications

Using temporal ICA to selectively remove global noise while preserving global signal in functional MRI data

(2018) Matthew F. Glasser et al.   NEUROIMAGE

Individual-specific functional connectivity markers track dimensional and categorical features of psychotic illness

(2018) Danhong Wang et al.   MOLECULAR PSYCHIATRY

The Big Reveal: Precision Mapping Shines a Gigantic Floodlight on the Cerebellum

(2018) Damien A. Fair   NEURON

Using connectome-based predictive modeling to predict individual behavior from brain connectivity

(2017) Xilin Shen et al.   Nature Protocols

Scanning the horizon: towards transparent and reproducible neuroimaging research

(2017) Russell A. Poldrack et al.   NATURE REVIEWS NEUROSCIENCE

Resting-state fMRI correlations: From link-wise unreliability to whole brain stability

(2017) Mario Pannunzi et al.   NEUROIMAGE

Cross-validation failure: Small sample sizes lead to large error bars

(2017) Gaël Varoquaux   NEUROIMAGE

Precision Functional Mapping of Individual Human Brains

(2017) Evan M. Gordon et al.   NEURON

A multi-modal parcellation of human cerebral cortex

(2016) Matthew F. Glasser et al.   NATURE

The Human Connectome Project's neuroimaging approach

(2016) Matthew F Glasser et al.   NATURE NEUROSCIENCE

Multimodal population brain imaging in the UK Biobank prospective epidemiological study

(2016) Karla L Miller et al.   NATURE NEUROSCIENCE

A neuromarker of sustained attention from whole-brain functional connectivity

(2015) Monica D Rosenberg et al.   NATURE NEUROSCIENCE

Functional connectome fingerprinting: identifying individuals using patterns of brain connectivity

(2015) Emily S Finn et al.   NATURE NEUROSCIENCE

Optimization of rs-fMRI Pre-processing for Enhanced Signal-Noise Separation, Test-Retest Reliability, and Group Discrimination

(2015) William R. Shirer et al.   NEUROIMAGE

Automatic denoising of functional MRI data: Combining independent component analysis and hierarchical fusion of classifiers

(2014) Gholamreza Salimi-Khorshidi et al.   NEUROIMAGE

ICA-based artefact removal and accelerated fMRI acquisition for improved resting state network imaging

(2014) Ludovica Griffanti et al.   NEUROIMAGE

MSM: A new flexible framework for Multimodal Surface Matching

(2014) Emma C. Robinson et al.   NEUROIMAGE

The effect of scan length on the reliability of resting-state fMRI connectivity estimates

(2013) Rasmus M. Birn et al.   NEUROIMAGE

Resting-state fMRI in the Human Connectome Project

(2013) Stephen M. Smith et al.   NEUROIMAGE

The WU-Minn Human Connectome Project: An overview

(2013) David C. Van Essen et al.   NEUROIMAGE

The minimal preprocessing pipelines for the Human Connectome Project

(2013) Matthew F. Glasser et al.   NEUROIMAGE

On the interpretation of weight vectors of linear models in multivariate neuroimaging

(2013) Stefan Haufe et al.   NEUROIMAGE

Cognition assessment using the NIH Toolbox

(2013) S. Weintraub et al.   NEUROLOGY

The lasso problem and uniqueness

(2013) Ryan J. Tibshirani   Electronic Journal of Statistics

The organization of the human cerebral cortex estimated by intrinsic functional connectivity

(2011) B. T. Thomas Yeo et al.   JOURNAL OF NEUROPHYSIOLOGY

Spurious but systematic correlations in functional connectivity MRI networks arise from subject motion

(2011) Jonathan D. Power et al.   NEUROIMAGE

Cognitive niches: An ecological model of strategy selection.

(2011) Julian N. Marewski et al.   PSYCHOLOGICAL REVIEW

Network-based statistic: Identifying differences in brain networks

(2010) Andrew Zalesky et al.   NEUROIMAGE

Distinct patterns of brain activity in young carriers of the APOE- 4 allele

(2009) N. Filippini et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Bayesian analysis of neuroimaging data in FSL

(2008) Mark W. Woolrich et al.   NEUROIMAGE