Identification of interleukin genes in Pogona vitticeps using a de novo transcriptome assembly from RNA-seq data

The differential expression of IL-4 and IL-13 and its impact on type-2 immunity

(2015) Katherine Bao et al.   CYTOKINE

The evolution of IL-4 and IL-13 and their receptor subunits

(2015) Tiehui Wang et al.   CYTOKINE

JPred4: a protein secondary structure prediction server

(2015) Alexey Drozdetskiy et al.   NUCLEIC ACIDS RESEARCH

Epigenetic regulation of interleukin-8, an inflammatory chemokine, in osteoarthritis

(2015) A. Takahashi et al.   OSTEOARTHRITIS AND CARTILAGE

Innate lymphoid cells: A new paradigm in immunology

(2015) G. Eberl et al.   SCIENCE

High-coverage sequencing and annotated assembly of the genome of the Australian dragon lizard Pogona vitticeps

(2015) Arthur Georges et al.   GigaScience

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

The IL-1 family in fish: Swimming through the muddy waters of inflammasome evolution

(2014) Nikolay V. Ogryzko et al.   DEVELOPMENTAL AND COMPARATIVE IMMUNOLOGY

The chicken IL-1 family: evolution in the context of the studied vertebrate lineage

(2014) Mark S. Gibson et al.   IMMUNOGENETICS

Identification of a gene for an ancient cytokine, interleukin 15-like, in mammals; interleukins 2 and 15 co-evolved with this third family member, all sharing binding motifs for IL-15Rα

(2013) Johannes M. Dijkstra et al.   IMMUNOGENETICS

Pitfalls in determining the cytokine profile of human T cells

(2013) Ingrid Olsen et al.   JOURNAL OF IMMUNOLOGICAL METHODS

De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis

(2013) Brian J Haas et al.   Nature Protocols

Optimal Method to Stimulate Cytokine Production and Its Use in Immunotoxicity Assessment

(2013) Wenchao Ai et al.   International Journal of Environmental Research and Public Health

Integrative Genomics Viewer (IGV): high-performance genomics data visualization and exploration

(2012) H. Thorvaldsdottir et al.   BRIEFINGS IN BIOINFORMATICS

The Inducible Tissue-Specific Expression of the Human IL-3/GM-CSF Locus Is Controlled by a Complex Array of Developmentally Regulated Enhancers

(2012) Euan W. Baxter et al.   JOURNAL OF IMMUNOLOGY

Streaming fragment assignment for real-time analysis of sequencing experiments

(2012) Adam Roberts et al.   NATURE METHODS

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

The interleukins of fish

(2011) C.J. Secombes et al.   DEVELOPMENTAL AND COMPARATIVE IMMUNOLOGY

Full-length transcriptome assembly from RNA-Seq data without a reference genome

(2011) Manfred G Grabherr et al.   NATURE BIOTECHNOLOGY

Integrative genomics viewer

(2011) James T Robinson et al.   NATURE BIOTECHNOLOGY

SignalP 4.0: discriminating signal peptides from transmembrane regions

(2011) Thomas Nordahl Petersen et al.   NATURE METHODS

Understanding the vertebrate immune system: insights from the reptilian perspective

(2010) L. M. Zimmerman et al.   JOURNAL OF EXPERIMENTAL BIOLOGY

The Human IL-3/Granulocyte-Macrophage Colony-Stimulating Factor Locus Is Epigenetically Silent in Immature Thymocytes and Is Progressively Activated during T Cell Development

(2010) F. Mirabella et al.   JOURNAL OF IMMUNOLOGY

A new bioinformatics analysis tools framework at EMBL-EBI

(2010) M. Goujon et al.   NUCLEIC ACIDS RESEARCH

De Novo Transcriptome Sequencing in Anopheles funestus Using Illumina RNA-Seq Technology

(2010) Jacob E. Crawford et al.   PLoS One

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

(2009) M. D. Robinson et al.   BIOINFORMATICS

Cloning of a novel interleukin (IL)-20-like gene in rainbow trout Oncorhynchus mykiss gives an insight into the evolution of the IL-10 family

(2009) Tiehui Wang et al.   DEVELOPMENTAL AND COMPARATIVE IMMUNOLOGY

Rainbow trout interleukin-2: Cloning, expression and bioactivity analysis

(2009) P. Díaz-Rosales et al.   FISH & SHELLFISH IMMUNOLOGY

Immunologic messenger molecules: Cytokines, interferons, and chemokines

(2009) Scott P. Commins et al.   JOURNAL OF ALLERGY AND CLINICAL IMMUNOLOGY

Comprehensive clarification of two paralogous interleukin 4/13 loci in teleost fish

(2008) Maki Ohtani et al.   IMMUNOGENETICS