Insights into the response of mangrove sediment microbiomes to heavy metal pollution: Ecological risk assessment and metagenomics perspectives

Taxonomic and functional analysis of soil microbial communities in a mining site across a metal(loid) contamination gradient

(2020) Mariela Navas et al.   EUROPEAN JOURNAL OF SOIL SCIENCE

Chromium in Benoa Bay, Bali - Indonesia

(2020) Yulianto Suteja et al.   MARINE POLLUTION BULLETIN

Unravelling the antibiotic and heavy metal resistome of a chronically polluted soil

(2020) Lateef Babatunde Salam   3 Biotech

Identification of Bacterial and Fungal Communities in the Roots of Orchids and Surrounding Soil in Heavy Metal Contaminated Area of Mining Heaps

(2020) Miroslav Böhmer et al.   Applied Sciences-Basel

Deciphering the Microbial Taxonomy and Functionality of Two Diverse Mangrove Ecosystems and Their Potential Abilities To Produce Bioactive Compounds

(2020) Shuilin Liao et al.   mSystems

Microbiome–environment interactions in antimony-contaminated rice paddies and the correlation of core microbiome with arsenic and antimony contamination

(2020) Baoqin Li et al.   CHEMOSPHERE

Mangrove forests along the coastline of Kerala, southern India: Current status and future prospects

(2020) S. Sreelekshmi et al.   Regional Studies in Marine Science

Mechanisms and challenges of microbial fuel cells for soil heavy metal(loid)s remediation

(2020) Williamson Gustave et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Heavy metal contamination in representative surface sediments of mangrove habitats of Cochin, Southern India

(2019) Philomina Joseph et al.   Environmental Earth Sciences

Metagenome sequencing to unveil microbial community composition and prevalence of antibiotic and metal resistance genes in hypersaline and hyperalkaline Lonar Lake, India

(2019) Jaya Chakraborty et al.   ECOLOGICAL INDICATORS

Integrating high-throughput sequencing and metagenome analysis to reveal the characteristic and resistance mechanism of microbial community in metal contaminated sediments

(2019) Changchun Yan et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Metagenomic analysis of microbial community and function involved in cd-contaminated soil

(2018) Gang Feng et al.   BMC MICROBIOLOGY

Insight into heavy metal resistome of soil psychrotolerant bacteria originating from King George Island (Antarctica)

(2018) Krzysztof Romaniuk et al.   POLAR BIOLOGY

Long-term and high-concentration heavy-metal contamination strongly influences the microbiome and functional genes in Yellow River sediments

(2018) Yong Chen et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Analysis of microbial communities in heavy metals-contaminated soils using the metagenomic approach

(2018) M. H. Hemmat-Jou et al.   ECOTOXICOLOGY

Comparative mangrove metagenome reveals global prevalence of heavy metals and antibiotic resistome across different ecosystems

(2018) Madangchanok Imchen et al.   Scientific Reports

Mangrove Sediment Microbiome: Adaptive Microbial Assemblages and Their Routed Biogeochemical Processes in Yunxiao Mangrove National Nature Reserve, China

(2018) Xiaolan Lin et al.   MICROBIAL ECOLOGY

Study on the influence of soil microbial community on the long-term heavy metal pollution of different land use types and depth layers in mine

(2018) Xingqing Zhao et al.   ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY

Heavy metal distribution and contamination status in the sedimentary environment of Cochin estuary

(2017) P.M. Salas et al.   MARINE POLLUTION BULLETIN

Bacterial Physiological Adaptations to Contrasting Edaphic Conditions Identified Using Landscape Scale Metagenomics

(2017) Ashish A. Malik et al.   mBio

Heavy metal resistance and virulence profile inPseudomonas aeruginosaisolated from Brazilian soils

(2016) André Pitondo-Silva et al.   APMIS

Geochemical assessment of trace metal pollution in sediments of the Cochin backwaters

(2016) Rejomon George et al.   ENVIRONMENTAL FORENSICS

Anthropogenic impact on mangrove sediments triggers differential responses in the heavy metals and antibiotic resistomes of microbial communities

(2016) Lucélia Cabral et al.   ENVIRONMENTAL POLLUTION

Rhizosphere microbiome metagenomics of gray mangroves (Avicennia marina) in the Red Sea

(2016) Hanin Alzubaidy et al.   GENE

Evaluation of heavy metal enrichment in Cochin estuary and its adjacent coast: multivariate statistical approach

(2015) K. R. Bindu et al.   ENVIRONMENTAL MONITORING AND ASSESSMENT

16S rDNA Pyrosequencing Analysis of Bacterial Community in Heavy Metals Polluted Soils

(2014) Marcin Gołębiewski et al.   MICROBIAL ECOLOGY

Molecular basis of active copper resistance mechanisms in Gram-negative bacteria

(2013) Kinga Bondarczuk et al.   CELL BIOLOGY AND TOXICOLOGY

Distribution of heavy metals in the core sediments of a tropical wetland system

(2013) P. S. Harikumar et al.   International Journal of Environmental Science and Technology

Toxicity of copper and zinc to Puntius parrah (Day, 1865)

(2013) P.P. Ciji et al.   MARINE ENVIRONMENTAL RESEARCH

Changes in metal contamination levels in estuarine sediments around India – An assessment

(2013) Parthasarathi Chakraborty et al.   MARINE POLLUTION BULLETIN

Bacteria Contribute to Sediment Nutrient Release and Reflect Progressed Eutrophication-Driven Hypoxia in an Organic-Rich Continental Sea

(2013) Hanna Sinkko et al.   PLoS One

The M5nr: a novel non-redundant database containing protein sequences and annotations from multiple sources and associated tools

(2012) Andreas Wilke et al.   BMC BIOINFORMATICS

The Microbiome of Brazilian Mangrove Sediments as Revealed by Metagenomics

(2012) Fernando Dini Andreote et al.   PLoS One

A Platform-Independent Method for Detecting Errors in Metagenomic Sequencing Data: DRISEE

(2012) Kevin P. Keegan et al.   PLoS Computational Biology

Mangrove trees affect the community structure and distribution of anammox bacteria at an anthropogenic-polluted mangrove in the Pearl River Delta reflected by 16S rRNA and hydrazine oxidoreductase (HZO) encoding gene analyses

(2011) Meng Li et al.   ECOTOXICOLOGY

Substrate Type Determines Metagenomic Profiles from Diverse Chemical Habitats

(2011) Thomas C. Jeffries et al.   PLoS One

Diversity and abundance of ammonia-oxidizing archaea and bacteria in polluted mangrove sediment

(2011) Huiluo Cao et al.   SYSTEMATIC AND APPLIED MICROBIOLOGY

SolexaQA: At-a-glance quality assessment of Illumina second-generation sequencing data

(2010) Murray P Cox et al.   BMC BIOINFORMATICS

Biocomplexity in Mangrove Ecosystems

(2009) I.C. Feller et al.   Annual Review of Marine Science

Systematic artifacts in metagenomes from complex microbial communities

(2009) Vicente Gomez-Alvarez et al.   ISME Journal

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

(2009) Ben Langmead et al.   GENOME BIOLOGY

The metagenomics RAST server – a public resource for the automatic phylogenetic and functional analysis of metagenomes

(2008) F Meyer et al.   BMC BIOINFORMATICS

Geochemistry of heavy metals in the surficial sediments of mangroves of the south west coast of India

(2008) P. R. Sarika et al.   CHEMISTRY AND ECOLOGY