A proteomic atlas of ligand–receptor interactions at the ovine maternal–fetal interface reveals the role of histone lactylation in uterine remodeling

Conceptus metabolomic profiling reveals stage-specific phenotypes leading up to pregnancy recognition in cattle

(2021) Constantine A Simintiras et al.   BIOLOGY OF REPRODUCTION

The proteome of IVF-induced aberrant embryo-maternal crosstalk by implantation stage in ewes

(2020) Qianying Yang et al.   Journal of Animal Science and Biotechnology

Protein Synthesis by Day 16 Bovine Conceptuses during the Time of Maternal Recognition of Pregnancy

(2020) Irene Malo Estepa et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Steroids Regulate SLC2A1 and SLC2A3 to Deliver Glucose Into Trophectoderm for Metabolism via Glycolysis

(2020) Avery C Kramer et al.   ENDOCRINOLOGY

Inhibition of Histone Methyltransferase EZH2 Suppresses Endometriotic Vesicle Development in a Rat Model of Endometriosis

(2020) Inevy Seguinot-Tarafa et al.   Reproductive Sciences

Performance and Its Limits in Rigid Body Protein-Protein Docking

(2020) Israel T. Desta et al.   STRUCTURE

TRPM7/RPSA Complex Regulates Pancreatic Cancer Cell Migration

(2020) Thibaut Lefebvre et al.   Frontiers in Cell and Developmental Biology

Blastocyst-induced ATP release from luminal epithelial cells initiates decidualization through the P2Y2 receptor in mice

(2020) Xiao-Wei Gu et al.   Science Signaling

Fine-tuned adaptation of embryo–endometrium pairs at implantation revealed by transcriptome analyses in Bos taurus

(2019) Fernando H. Biase et al.   PLOS BIOLOGY

Monocarboxylate transporters in cancer

(2019) Valéry L. Payen et al.   Molecular Metabolism

Analysis of the Uterine Lumen in Fertility-Classified Heifers: I. Glucose, Prostaglandins and Lipids

(2019) Joao G N Moraes et al.   BIOLOGY OF REPRODUCTION

Analysis of the Uterine Lumen in Fertility-Classified Heifers: II. Proteins and Metabolites

(2019) Joao G N Moraes et al.   BIOLOGY OF REPRODUCTION

Metabolic regulation of gene expression by histone lactylation

(2019) Di Zhang et al.   NATURE

Nucleolar stress regulation of endometrial receptivity in mouse models and human cell lines

(2019) Wei Hu et al.   Cell Death & Disease

PathwayConnector: finding complementary pathways to enhance functional analysis

(2018) George Minadakis et al.   BIOINFORMATICS

Single-cell reconstruction of the early maternal–fetal interface in humans

(2018) Roser Vento-Tormo et al.   NATURE

STRING v11: protein–protein association networks with increased coverage, supporting functional discovery in genome-wide experimental datasets

(2018) Damian Szklarczyk et al.   NUCLEIC ACIDS RESEARCH

Analysis of Single-Cell RNA-Seq Identifies Cell-Cell Communication Associated with Tumor Characteristics

(2018) Manu P. Kumar et al.   Cell Reports

Apposition to endometrial epithelial cells activates mouse blastocysts for implantation

(2017) Peter T. Ruane et al.   MOLECULAR HUMAN REPRODUCTION

Dynamic epigenomic landscapes during early lineage specification in mouse embryos

(2017) Yu Zhang et al.   NATURE GENETICS

The ClusPro web server for protein–protein docking

(2017) Dima Kozakov et al.   Nature Protocols

New additions to the ClusPro server motivated by CAPRI

(2017) Sandor Vajda et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

Different enzymatic antioxidative pathways operate within the sheep caruncular and intercaruncular endometrium throughout the estrous cycle and early pregnancy

(2017) K.H. Al-Gubory et al.   THERIOGENOLOGY

Analysis of the Uterine Epithelial and Conceptus Transcriptome and Luminal Fluid Proteome During the Peri-Implantation Period of Pregnancy in Sheep

(2016) K. Brooks et al.   BIOLOGY OF REPRODUCTION

miR-133b Reverses the Hydrosalpinx-induced Impairment of Embryo Attachment Through Down-regulation of SGK1

(2016) Chengcai Kong et al.   JOURNAL OF CLINICAL ENDOCRINOLOGY & METABOLISM

Metabolism of hyperpolarized [1-13C]pyruvate through alternate pathways in rat liver

(2016) Eunsook S. Jin et al.   NMR IN BIOMEDICINE

Impaired imprinted X chromosome inactivation is responsible for the skewed sex ratio following in vitro fertilization

(2016) Kun Tan et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Lactate production by the mammalian blastocyst: Manipulating the microenvironment for uterine implantation and invasion?

(2015) David K. Gardner   BIOESSAYS

Characterization of global loss of imprinting in fetal overgrowth syndrome induced by assisted reproduction

(2015) Zhiyuan Chen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A draft network of ligand–receptor-mediated multicellular signalling in human

(2015) Jordan A. Ramilowski et al.   Nature Communications

Dynamic Proteomic Profiles of In Vivo- and In Vitro-Produced Mouse Postimplantation Extraembryonic Tissues and Placentas1

(2014) Linlin Sui et al.   BIOLOGY OF REPRODUCTION

The role of the osteopontin–integrin αvβ3 interaction at implantation: functional analysis using three different in vitro models

(2014) Youn-Jung Kang et al.   HUMAN REPRODUCTION

Transcriptomic Changes During the Pre-Receptive to Receptive Transition in Human Endometrium Detected by RNA-Seq

(2014) Shuanggang Hu et al.   JOURNAL OF CLINICAL ENDOCRINOLOGY & METABOLISM

The Nrf2 regulatory network provides an interface between redox and intermediary metabolism

(2014) John D. Hayes et al.   TRENDS IN BIOCHEMICAL SCIENCES

Parallels between embryo and cancer cell metabolism

(2013) Danielle G. Smith et al.   BIOCHEMICAL SOCIETY TRANSACTIONS

Oxamate Is an Alternative Substrate for Pyruvate Carboxylase from Rhizobium etli

(2013) John F. Marlier et al.   BIOCHEMISTRY

Calpain 2 activity increases at the time of implantation in rat uterine luminal epithelial cells and administration of calpain inhibitor significantly reduces implantation sites

(2013) Yui Kaneko et al.   HISTOCHEMISTRY AND CELL BIOLOGY

NME1 suppression promotes growth, adhesion and implantation of endometrial stromal cells via Akt and MAPK/Erk1/2 signal pathways in the endometriotic milieu

(2013) Ming-Qing Li et al.   HUMAN REPRODUCTION

Comparative Analysis of Dynamic Proteomic Profiles between in Vivo and in Vitro Produced Mouse Embryos during Postimplantation Period

(2013) Jingzhou Nie et al.   JOURNAL OF PROTEOME RESEARCH

Physiological and molecular determinants of embryo implantation

(2013) Shuang Zhang et al.   MOLECULAR ASPECTS OF MEDICINE

How good is automated protein docking?

(2013) Dima Kozakov et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

Comparative analysis of proteomic profiles between endometrial caruncular and intercaruncular areas in ewes during the peri-implantation period

(2013) Yang Wang et al.   Journal of Animal Science and Biotechnology

Conceptus-Endometrium Crosstalk During Maternal Recognition of Pregnancy in Cattle1

(2012) Solomon Mamo et al.   BIOLOGY OF REPRODUCTION

Antioxidative signalling pathways regulate the level of reactive oxygen species at the endometrial–extraembryonic membranes interface during early pregnancy

(2012) Kaïs H. Al-Gubory et al.   INTERNATIONAL JOURNAL OF BIOCHEMISTRY & CELL BIOLOGY

Mechanisms of implantation: strategies for successful pregnancy

(2012) Jeeyeon Cha et al.   NATURE MEDICINE

The use of ruminant models in biomedical perinatal research

(2012) O. Morel et al.   THERIOGENOLOGY

Endometrial HSD11B1 and Cortisol Regeneration in the Ovine Uterus: Effects of Pregnancy, Interferon Tau, and Prostaglandins1

(2011) Piotr Dorniak et al.   BIOLOGY OF REPRODUCTION

Life and death responses to trophinin-mediated adhesion during blastocyst implantation

(2011) D. Randall Armant   CELL CYCLE

Collagen VI is a basement membrane component that regulates epithelial cell–fibronectin interactions

(2011) Jean-François Groulx et al.   MATRIX BIOLOGY

Flux through hepatic pyruvate carboxylase and phosphoenolpyruvate carboxykinase detected by hyperpolarized 13C magnetic resonance

(2011) M. E. Merritt et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Proteomic analysis of pregnancy-related proteins from pig uterus endometrium during pregnancy

(2011) Jung-Il Chae et al.   Proteome Science

αvβ3 Integrin may Participate in Conceptus Attachment by Regulating Morphologic Changes in the Endometrium during Peri-implantation in Ovine

(2011) P-C Wan et al.   REPRODUCTION IN DOMESTIC ANIMALS

Cathepsin B, Cathepsin L, and Cystatin C in the Porcine Uterus and Placenta: Potential Roles in Endometrial/Placental Remodeling and in Fluid-Phase Transport of Proteins Secreted by Uterine Epithelia Across Placental Areolae1

(2010) Gwonhwa Song et al.   BIOLOGY OF REPRODUCTION

Retinoic acid stimulation of VEGF secretion from human endometrial stromal cells is mediated by production of reactive oxygen species

(2010) Juanjuan Wu et al.   JOURNAL OF PHYSIOLOGY-LONDON

Proteomic Profile of Uterine Luminal Fluid from Early Pregnant Ewes

(2010) Jill M. Koch et al.   JOURNAL OF PROTEOME RESEARCH

NME1 at the human maternal–fetal interface downregulates titin expression and invasiveness of trophoblast cells via MAPK pathway in early pregnancy

(2010) Ke-Ming Xie et al.   REPRODUCTION

Models for Study of Human Embryo Implantation: Choice of Cell Lines?1

(2009) Natalie J. Hannan et al.   BIOLOGY OF REPRODUCTION

Quantification of Fibronectin 1 (FN1) splice variants, including two novel ones, and analysis of integrins as candidate FN1 receptors in bovine preimplantation embryos

(2009) Karen Goossens et al.   BMC DEVELOPMENTAL BIOLOGY

Silencing of the JNK pathway maintains progesterone receptor activity in decidualizing human endometrial stromal cells exposed to oxidative stress signals

(2009) Beatriz Leitao et al.   FASEB JOURNAL

Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

(2009) Da Wei Huang et al.   Nature Protocols

Quantitative proteomic analysis of single pancreatic islets

(2009) Leonie F. Waanders et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Endometrium as an early sensor of in vitro embryo manipulation technologies

(2009) N. Mansouri-Attia et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The endometrium responds differently to cloned versus fertilized embryos

(2009) S. Bauersachs et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Database searching and accounting of multiplexed precursor and product ion spectra from the data independent analysis of simple and complex peptide mixtures

(2009) Guo-Zhong Li et al.   PROTEOMICS

Gastrin-Releasing Peptide (GRP) in the Ovine Uterus: Regulation by Interferon Tau and Progesterone1

(2008) Gwonhwa Song et al.   BIOLOGY OF REPRODUCTION

MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification

(2008) Jürgen Cox et al.   NATURE BIOTECHNOLOGY

Expression of Interferon (IFN)-Stimulated Genes in Extrauterine Tissues during Early Pregnancy in Sheep Is the Consequence of Endocrine IFN-τ Release from the Uterine Vein

(2007) João F. Oliveira et al.   ENDOCRINOLOGY