An overview of using fungal DNA for the diagnosis of invasive mycoses
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Title
An overview of using fungal DNA for the diagnosis of invasive mycoses
Authors
Keywords
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Journal
EXPERT REVIEW OF MOLECULAR DIAGNOSTICS
Volume -, Issue -, Pages 1-16
Publisher
Informa UK Limited
Online
2022-02-08
DOI
10.1080/14737159.2022.2037423
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Note: Only part of the references are listed.- The emergence of COVID-19 associated mucormycosis: a review of cases from 18 countries
- (2022) Martin Hoenigl et al. Lancet Microbe
- Aspergillus Polymerase Chain Reaction—An Update on Technical Recommendations, Clinical Applications, and Justification for Inclusion in the Second Revision of the EORTC/MSGERC Definitions of Invasive Fungal Disease
- (2021) P Lewis White et al. CLINICAL INFECTIOUS DISEASES
- EORTC/MSGERC Definitions of Invasive Fungal Diseases: Summary of Activities of the Intensive Care Unit Working Group
- (2021) Matteo Bassetti et al. CLINICAL INFECTIOUS DISEASES
- Clinical Accuracy and Impact of Plasma Cell-Free DNA Fungal PCR Panel for Non-Invasive Diagnosis of Fungal Infection
- (2021) Fiona Senchyna et al. CLINICAL INFECTIOUS DISEASES
- Evaluation of a new Histoplasma spp. reverse transcriptase quantitative PCR assay
- (2021) Alexandre Alanio et al. JOURNAL OF MOLECULAR DIAGNOSTICS
- Increased sensitivity of a new commercial reverse transcriptase-quantitative PCR for the detection of Pneumocystis jirovecii in respiratory specimens
- (2021) Sarah Dellière et al. MEDICAL MYCOLOGY
- Molecular Diagnosis of Yeast Infections
- (2021) P. Lewis White et al. Current Fungal Infection Reports
- Coronavirus Disease 2019–Associated Invasive Fungal Infection
- (2021) John W Baddley et al. Open Forum Infectious Diseases
- Performance of the T2Candida Panel for the diagnosis of intra-abdominal candidiasis
- (2020) F Lamoth et al. Open Forum Infectious Diseases
- Evaluation of Droplet Digital Polymerase Chain Reaction (ddPCR) for the Absolute Quantification of Aspergillus species in the Human Airway
- (2020) Tuang Yeow Poh et al. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
- Evaluation of MucorGenius® mucorales PCR assay for the diagnosis of pulmonary mucormycosis
- (2020) Hélène Guegan et al. JOURNAL OF INFECTION
- Confronting and mitigating the risk of COVID-19 Associated Pulmonary Aspergillosis (CAPA)
- (2020) Darius Armstrong-James et al. EUROPEAN RESPIRATORY JOURNAL
- Mucormycosis treatment: Recommendations, latest advances, and perspectives
- (2020) K. Brunet et al. JOURNAL DE MYCOLOGIE MEDICALE
- Interlaboratory evaluation of Mucorales PCR assays for testing serum specimens: A study by the fungal PCR Initiative and the Modimucor study group
- (2020) S Rocchi et al. MEDICAL MYCOLOGY
- Molecular Methods for the Diagnosis of Invasive Candidiasis
- (2020) Iris Camp et al. Journal of Fungi
- A National Strategy to Diagnose Coronavirus Disease 2019–Associated Invasive Fungal Disease in the Intensive Care Unit
- (2020) P Lewis White et al. CLINICAL INFECTIOUS DISEASES
- Deciphering Aspergillus fumigatus cyp51A-mediated triazole resistance by pyrosequencing of respiratory specimens
- (2020) Lilyann Novak-Frazer et al. JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY
- Serum (1,3)-Beta-d-Glucan has suboptimal performance for the diagnosis of Pneumocystis jirovecii pneumonia in cancer patients and correlates poorly with respiratory burden as measured by quantitative PCR
- (2020) Ariel D. Szvalb et al. JOURNAL OF INFECTION
- Candidemia Diagnosis With T2 Nuclear Magnetic Resonance in a PICU
- (2020) Emilio Cendejas-Bueno et al. Pediatric Critical Care Medicine
- COVID-19-Associated Candidiasis (CAC): An Underestimated Complication in the Absence of Immunological Predispositions?
- (2020) Amir Arastehfar et al. Journal of Fungi
- The impact of anti-mould prophylaxis on Aspergillus PCR blood testing for the diagnosis of invasive aspergillosis
- (2020) M Cruciani et al. JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY
- Defining and managing COVID-19-associated pulmonary aspergillosis: the 2020 ECMM/ISHAM consensus criteria for research and clinical guidance
- (2020) Philipp Koehler et al. LANCET INFECTIOUS DISEASES
- Variable Correlation between Bronchoalveolar Lavage Fluid Fungal Load and Serum-(1,3)-β-d-Glucan in Patients with Pneumocystosis—A Multicenter ECMM Excellence Center Study
- (2020) Toine Mercier et al. Journal of Fungi
- Pneumocystis jirovecii Disease: Basis for the Revised EORTC/MSGERC Invasive Fungal Disease Definitions in Individuals Without Human Immunodeficiency Virus
- (2020) Katrien Lagrou et al. CLINICAL INFECTIOUS DISEASES
- The presence of Pneumocystis jirovecii in critically ill patients with COVID-19
- (2020) Alexandre Alanio et al. JOURNAL OF INFECTION
- Diagnostic performance of T2Candida among ICU patients with risk factors for invasive candidiasis
- (2019) Maiken Cavling Arendrup et al. Open Forum Infectious Diseases
- ESICM/ESCMID task force on practical management of invasive candidiasis in critically ill patients
- (2019) Ignacio Martin-Loeches et al. INTENSIVE CARE MEDICINE
- Recent trends in molecular diagnostics of yeast infections: from PCR to NGS
- (2019) et al. FEMS MICROBIOLOGY REVIEWS
- A Rapid and Automated Sample-to-Result Candida auris Real-Time PCR Assay for High-Throughput Testing of Surveillance Samples with the BD Max Open System
- (2019) L. Leach et al. JOURNAL OF CLINICAL MICROBIOLOGY
- T2Candida magnetic resonance in patients with invasive candidiasis: Strengths and limitations
- (2019) Christoph Zurl et al. MEDICAL MYCOLOGY
- The Fungal PCR Initiative's evaluation of in-house and commercial Pneumocystis jirovecii qPCR assays: Toward a standard for a diagnostics assay
- (2019) Maud Gits-Muselli et al. MEDICAL MYCOLOGY
- Revision and Update of the Consensus Definitions of Invasive Fungal Disease From the European Organization for Research and Treatment of Cancer and the Mycoses Study Group Education and Research Consortium
- (2019) J Peter Donnelly et al. CLINICAL INFECTIOUS DISEASES
- Evaluation of a Rapid Fungal Detection Panel for Identification of Candidemia at an Academic Medical Center
- (2019) John P. Bomkamp et al. JOURNAL OF CLINICAL MICROBIOLOGY
- Global guideline for the diagnosis and management of mucormycosis: an initiative of the European Confederation of Medical Mycology in cooperation with the Mycoses Study Group Education and Research Consortium
- (2019) Oliver A Cornely et al. LANCET INFECTIOUS DISEASES
- Quantifying guideline adherence in mucormycosis management using the EQUAL score
- (2019) Philipp Koehler et al. MYCOSES
- A Multivariable Prediction Model for Pneumocystis jirovecii Pneumonia in Hematology Patients with Acute Respiratory Failure
- (2018) Elie Azoulay et al. AMERICAN JOURNAL OF RESPIRATORY AND CRITICAL CARE MEDICINE
- Development of a quantitative PCR detecting Cunninghamella bertholletiae to help in diagnosing this rare and aggressive mucormycosis
- (2018) Anne-Pauline Bellanger et al. BONE MARROW TRANSPLANTATION
- Detecting Infections Rapidly and Easily for Candidemia Trial, Part 2 (DIRECT2): A Prospective, Multicenter Study of the T2Candida Panel
- (2018) Cornelius J Clancy et al. CLINICAL INFECTIOUS DISEASES
- The epidemiology and clinical manifestations of mucormycosis: a systematic review and meta-analysis of case reports
- (2018) Wirawan Jeong et al. CLINICAL MICROBIOLOGY AND INFECTION
- T2Candida MR as a predictor of outcome in patients with suspected invasive candidiasis starting empirical antifungal treatment: a prospective pilot study
- (2018) Patricia Muñoz et al. JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY
- QPCR detection of Mucorales DNA in bronchoalveolar lavage fluid to diagnose pulmonary mucormycosis
- (2018) Emeline E Scherer et al. JOURNAL OF CLINICAL MICROBIOLOGY
- Efficacy of T2 Magnetic Resonance Assay in Monitoring Candidemia after Initiation of Antifungal Therapy: the Serial Therapeutic and Antifungal Monitoring Protocol (STAMP) Trial
- (2018) Eleftherios Mylonakis et al. JOURNAL OF CLINICAL MICROBIOLOGY
- Diagnosing Invasive Candidiasis
- (2018) Cornelius J. Clancy et al. JOURNAL OF CLINICAL MICROBIOLOGY
- Diagnosis of aspergillosis by PCR: Clinical considerations and technical tips
- (2018) Rosemary A Barnes et al. MEDICAL MYCOLOGY
- Clinical, Diagnostic, and Treatment Disparities between HIV-Infected and Non-HIV-Infected Immunocompromised Patients with Pneumocystis jirovecii Pneumonia
- (2018) Helmut J.F. Salzer et al. RESPIRATION
- Recent advances in the molecular diagnosis of mucormycosis
- (2018) Sanjeet S. Dadwal et al. EXPERT REVIEW OF MOLECULAR DIAGNOSTICS
- “Direct detection of emergent fungal pathogen Candida auris in clinical skin swabs by SYBR Green qPCR assay”
- (2018) D. Joseph Sexton et al. JOURNAL OF CLINICAL MICROBIOLOGY
- Aspergillus PCR in Bronchoalveolar Lavage Fluid for the Diagnosis and Prognosis of Aspergillosis in Patients With Hematological and Non-hematological Conditions
- (2018) Sébastien Imbert et al. Frontiers in Microbiology
- Invasive aspergillosis in patients admitted to the intensive care unit with severe influenza: a retrospective cohort study
- (2018) Alexander F A D Schauwvlieghe et al. Lancet Respiratory Medicine
- Mycobiome diversity: high-throughput sequencing and identification of fungi
- (2018) R. Henrik Nilsson et al. NATURE REVIEWS MICROBIOLOGY
- Influenza virus and factors that are associated with ICU admission, pulmonary co-infections and ICU mortality
- (2018) M.C. Beumer et al. JOURNAL OF CRITICAL CARE
- Recent advances and novel approaches in laboratory-based diagnostic mycology
- (2018) P Lewis White MEDICAL MYCOLOGY
- Evaluation of the automated Becton Dickinson MAX real-time PCR platform for detection of Pneumocystis jirovecii
- (2017) Jung-Yien Chien et al. Future Microbiology
- Predicting Invasive Aspergillosis in Hematology Patients by Combining Clinical and Genetic Risk Factors with Early Diagnostic Biomarkers
- (2017) P. Lewis White et al. JOURNAL OF CLINICAL MICROBIOLOGY
- A Comparison of Aspergillus and Mucorales PCR Testing of Different Bronchoalveolar Lavage Fluid Fractions from Patients with Suspected Invasive Pulmonary Fungal Disease
- (2017) Jan Springer et al. JOURNAL OF CLINICAL MICROBIOLOGY
- Culture-Independent Molecular Methods for Detection of Antifungal Resistance Mechanisms and Fungal Identification
- (2017) David S Perlin et al. JOURNAL OF INFECTIOUS DISEASES
- Molecular Demonstration of a Pneumocystis Outbreak in Stem Cell Transplant Patients: Evidence for Transmission in the Daycare Center
- (2017) Christine Robin et al. Frontiers in Microbiology
- Pneumocystis PCR: It Is Time to Make PCR the Test of Choice
- (2017) Laura Doyle et al. Open Forum Infectious Diseases
- Detection of Circulating Mucorales DNA in Critically Ill Burn Patients: Preliminary Report of a Screening Strategy for Early Diagnosis and Treatment
- (2016) Matthieu Legrand et al. CLINICAL INFECTIOUS DISEASES
- Pneumocystis jiroveciipneumonia: still a concern in patients with haematological malignancies and stem cell transplant recipients
- (2016) Catherine Cordonnier et al. JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY
- ECIL guidelines for the diagnosis ofPneumocystis jiroveciipneumonia in patients with haematological malignancies and stem cell transplant recipients
- (2016) Alexandre Alanio et al. JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY
- PCR-based detection of Aspergillus fumigatus Cyp51A mutations on bronchoalveolar lavage: a multicentre validation of the AsperGenius assay ® in 201 patients with haematological disease suspected for invasive aspergillosis
- (2016) G. M. Chong et al. JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY
- Prospective Biomarker Screening for Diagnosis of Invasive Aspergillosis in High-Risk Pediatric Patients
- (2016) Juergen Loeffler et al. JOURNAL OF CLINICAL MICROBIOLOGY
- New Panfungal Real-Time PCR Assay for Diagnosis of Invasive Fungal Infections
- (2016) Clara Valero et al. JOURNAL OF CLINICAL MICROBIOLOGY
- Comparison of Performance Characteristics of Aspergillus PCR in Testing a Range of Blood-Based Samples in Accordance with International Methodological Recommendations
- (2016) Jan Springer et al. JOURNAL OF CLINICAL MICROBIOLOGY
- Clinical evaluation of a Mucorales-specific real-time PCR assay in tissue and serum samples
- (2016) Jan Springer et al. JOURNAL OF MEDICAL MICROBIOLOGY
- Development and application of two independent real-time PCR assays to detect clinically relevant Mucorales species
- (2016) Jan Springer et al. JOURNAL OF MEDICAL MICROBIOLOGY
- Rapid detection of fungal pathogens in bronchoalveolar lavage samples using panfungal PCR combined with high resolution melting analysis
- (2016) Matej Bezdicek et al. MEDICAL MYCOLOGY
- Is It Time to Include CT “Reverse Halo Sign” and qPCR Targeting Mucorales in Serum to EORTC-MSG Criteria for the Diagnosis of Pulmonary Mucormycosis in Leukemia Patients?: Table 1.
- (2016) Denis Caillot et al. Open Forum Infectious Diseases
- Galactomannan and Polymerase Chain Reaction–Based Screening for Invasive Aspergillosis Among High-Risk Hematology Patients: A Diagnostic Meta-analysis
- (2015) Marios Arvanitis et al. CLINICAL INFECTIOUS DISEASES
- T2 Magnetic Resonance Assay for the Rapid Diagnosis of Candidemia in Whole Blood: A Clinical Trial
- (2015) Eleftherios Mylonakis et al. CLINICAL INFECTIOUS DISEASES
- Next-generation sequencing offers new insights into the resistance ofCandidaspp. to echinocandins and azoles
- (2015) Cécile Garnaud et al. JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY
- Impact of HIV Infection Status on Interpretation of Quantitative PCR for Detection of Pneumocystis jirovecii
- (2015) M. Louis et al. JOURNAL OF CLINICAL MICROBIOLOGY
- Analytical Comparison ofIn Vitro-Spiked Human Serum and Plasma for PCR-Based Detection of Aspergillus fumigatus DNA: a Study by the European Aspergillus PCR Initiative
- (2015) Juergen Loeffler et al. JOURNAL OF CLINICAL MICROBIOLOGY
- Clinical Performance of Aspergillus PCR for Testing Serum and Plasma: a Study by the European Aspergillus PCR Initiative
- (2015) P. Lewis White et al. JOURNAL OF CLINICAL MICROBIOLOGY
- Transcriptomic Analysis of Vulvovaginal Candidiasis Identifies a Role for the NLRP3 Inflammasome
- (2015) Vincent M. Bruno et al. mBio
- Genomic Context of Azole Resistance Mutations in Aspergillus fumigatus Determined Using Whole-Genome Sequencing
- (2015) Alireza Abdolrasouli et al. mBio
- Serum Galactomannan Versus a Combination of Galactomannan and Polymerase Chain Reaction-Based Aspergillus DNA Detection for Early Therapy of Invasive Aspergillosis in High-Risk Hematological Patients: A Randomized Controlled Trial
- (2014) J. M. Aguado et al. CLINICAL INFECTIOUS DISEASES
- Diagnosis of Pneumocystis jirovecii Pneumonia in Immunocompromised Patients by Real-Time PCR: a 4-Year Prospective Study
- (2014) Florence Robert-Gangneux et al. JOURNAL OF CLINICAL MICROBIOLOGY
- Rapid Detection and Identification of Mucormycetes in Bronchoalveolar Lavage Samples from Immunocompromised Patients with Pulmonary Infiltrates by Use of High-Resolution Melt Analysis
- (2014) M. Lengerova et al. JOURNAL OF CLINICAL MICROBIOLOGY
- PCR in Diagnosis of Invasive Aspergillosis: a Meta-Analysis of Diagnostic Performance
- (2014) M. Arvanitis et al. JOURNAL OF CLINICAL MICROBIOLOGY
- Combined real-time PCR and galactomannan surveillance improves diagnosis of invasive aspergillosis in high risk patients with haematological malignancies
- (2013) Thomas R. Rogers et al. BRITISH JOURNAL OF HAEMATOLOGY
- Quantitative Polymerase Chain Reaction Detection of Circulating DNA in Serum for Early Diagnosis of Mucormycosis in Immunocompromised Patients
- (2013) L. Millon et al. CLINICAL INFECTIOUS DISEASES
- Finding the “Missing 50%” of Invasive Candidiasis: How Nonculture Diagnostics Will Improve Understanding of Disease Spectrum and Transform Patient Care
- (2013) Cornelius J. Clancy et al. CLINICAL INFECTIOUS DISEASES
- Utility of bronchoalveolar lavage fluid galactomannan alone or in combination with PCR for the diagnosis of invasive aspergillosis in adult hematology patients: A systematic review and meta-analysis
- (2013) Siow Chin Heng et al. CRITICAL REVIEWS IN MICROBIOLOGY
- Development and Evaluation of a Calibrator Material for Nucleic Acid-Based Assays for Diagnosing Aspergillosis
- (2013) G. M. Lyon et al. JOURNAL OF CLINICAL MICROBIOLOGY
- Prevention and diagnosis of invasive fungal disease in high-risk patients within an integrative care pathway
- (2013) Rosemary A. Barnes et al. JOURNAL OF INFECTION
- Galactomannan and PCR versus culture and histology for directing use of antifungal treatment for invasive aspergillosis in high-risk haematology patients: a randomised controlled trial
- (2013) C Orla Morrissey et al. LANCET INFECTIOUS DISEASES
- Evaluation of PCR in Bronchoalveolar Lavage Fluid for Diagnosis of Pneumocystis jirovecii Pneumonia: A Bivariate Meta-Analysis and Systematic Review
- (2013) Li-Chao Fan et al. PLoS One
- Performance of Candida Real-time Polymerase Chain Reaction, -D-Glucan Assay, and Blood Cultures in the Diagnosis of Invasive Candidiasis
- (2012) M. H. Nguyen et al. CLINICAL INFECTIOUS DISEASES
- ESCMID* *This guideline was presented in part at ECCMID 2011. European Society for Clinical Microbiology and Infectious Diseases. guideline for the diagnosis and management of Candida diseases 2012: diagnostic procedures
- (2012) M. Cuenca-Estrella et al. CLINICAL MICROBIOLOGY AND INFECTION
- A Novel Extraction Method Combining Plasma with a Whole-Blood Fraction Shows Excellent Sensitivity and Reproducibility for Patients at High Risk for Invasive Aspergillosis
- (2012) J. Springer et al. JOURNAL OF CLINICAL MICROBIOLOGY
- Diagnostic Accuracy of PCR Alone Compared to Galactomannan in Bronchoalveolar Lavage Fluid for Diagnosis of Invasive Pulmonary Aspergillosis: a Systematic Review
- (2012) T. Avni et al. JOURNAL OF CLINICAL MICROBIOLOGY
- The strategy for the diagnosis of invasive pulmonary aspergillosis should depend on both the underlying condition and the leukocyte count of patients with hematologic malignancies
- (2011) A. Bergeron et al. BLOOD
- Evaluation of Aspergillus PCR Protocols for Testing Serum Specimens
- (2011) P. Lewis White et al. JOURNAL OF CLINICAL MICROBIOLOGY
- Evaluation of PCR on Bronchoalveolar Lavage Fluid for Diagnosis of Invasive Aspergillosis: A Bivariate Metaanalysis and Systematic Review
- (2011) Wenkui Sun et al. PLoS One
- Rapid Detection and Identification of Mucormycetes from Culture and Tissue Samples by Use of High-Resolution Melt Analysis
- (2010) K. Hrncirova et al. JOURNAL OF CLINICAL MICROBIOLOGY
- Critical Stages of Extracting DNA from Aspergillus fumigatus in Whole-Blood Specimens
- (2010) P. L. White et al. JOURNAL OF CLINICAL MICROBIOLOGY
- PCR Diagnosis of Invasive Candidiasis: Systematic Review and Meta-Analysis
- (2010) T. Avni et al. JOURNAL OF CLINICAL MICROBIOLOGY
- Aspergillus PCR: One Step Closer to Standardization
- (2010) P. L. White et al. JOURNAL OF CLINICAL MICROBIOLOGY
- Primary diagnostic approaches of invasive aspergillosis – molecular testing
- (2010) Stéphane Bretagne MEDICAL MYCOLOGY
- Are Members of the Fungal Genus Pneumocystis (a) Commensals; (b) Opportunists; (c) Pathogens; or (d) All of the Above?
- (2010) Melanie T. Cushion PLoS Pathogens
- Sequencing and Analysis of Fungal rRNA Operons for Development of Broad-Range Fungal PCR Assays
- (2009) P. D. Khot et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Bronchoalveolar Lavage Fluid Galactomannan for the Diagnosis of Invasive Pulmonary Aspergillosis in Patients with Hematologic Diseases
- (2009) Johan Maertens et al. CLINICAL INFECTIOUS DISEASES
- Use of PCR for diagnosis of invasive aspergillosis: systematic review and meta-analysis
- (2009) Carlo Mengoli et al. LANCET INFECTIOUS DISEASES
- Real-Time PCR Method for Detection of Zygomycetes
- (2008) D. J. Hata et al. JOURNAL OF CLINICAL MICROBIOLOGY
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