Addition of organic acids to acid mine drainage polluted wetland sediment leads to microbial community structure and functional changes and improved water quality

FeGenie: A Comprehensive Tool for the Identification of Iron Genes and Iron Gene Neighborhoods in Genome and Metagenome Assemblies

(2020) Arkadiy I. Garber et al.   Frontiers in Microbiology

Analysis of Fungal Composition in Mine-Contaminated Soils in Hechi City

(2020) Fengcai Ye et al.   CURRENT MICROBIOLOGY

Metabolomic, functional, and ecologic responses of the common freshwater fungus Neonectria lugdunensis to mine drainage stress

(2020) Sahadevan Seena et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Rhizospheric Organic Acids as Biostimulants: Monitoring Feedbacks on Soil Microorganisms and Biochemical Properties

(2020) Sandra Macias-Benitez et al.   Frontiers in Plant Science

Effective Treatment of Acid Mine Drainage with Microbial Fuel Cells: An Emphasis on Typical Energy Substrates

(2020) Chenbing Ai et al.   Minerals

Generation of Alkalinity by Stimulation of Microbial Iron Reduction in Acid Rock Drainage Systems: Impact of Natural Organic Matter Types

(2020) Martha E. Jimenez-Castaneda et al.   WATER AIR AND SOIL POLLUTION

Biosulfidogenesis Mediates Natural Attenuation in Acidic Mine Pit Lakes

(2020) Charlotte M. van der Graaf et al.   Microorganisms

Changes in microbial communities of a passive coal mine drainage bioremediation system

(2019) Hannah Roth et al.   CANADIAN JOURNAL OF MICROBIOLOGY

The association of microbial activity with Fe, S and trace element distribution in sediment cores within a natural wetland polluted by acid mine drainage

(2019) Oscar E. Aguinaga et al.   CHEMOSPHERE

Iron and sulfur cycling in acid sulfate soil wetlands under dynamic redox conditions: A review

(2018) Niloofar Karimian et al.   CHEMOSPHERE

Bacterial, archaeal, and fungal community responses to acid mine drainage-laden pollution in a rice paddy soil ecosystem

(2018) Han Wang et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Microbial Community Shifts in Response to Acid Mine Drainage Pollution Within a Natural Wetland Ecosystem

(2018) Oscar E. Aguinaga et al.   Frontiers in Microbiology

Sugarcane Bagasse as a Microbial Host Media for the Passive Treatment of Acid Mine Drainage

(2018) Dennis G. Grubb et al.   JOURNAL OF ENVIRONMENTAL ENGINEERING

Metal homeostasis and resistance in bacteria

(2017) Pete Chandrangsu et al.   NATURE REVIEWS MICROBIOLOGY

Biological attenuation of arsenic and iron in a continuous flow bioreactor treating acid mine drainage (AMD)

(2017) L. Fernandez-Rojo et al.   WATER RESEARCH

Optimizations on supply and distribution of dissolved oxygen in constructed wetlands: A review

(2016) Huaqing Liu et al.   BIORESOURCE TECHNOLOGY

Microbial communities, processes and functions in acid mine drainage ecosystems

(2016) Lin-xing Chen et al.   CURRENT OPINION IN BIOTECHNOLOGY

The use of a passive treatment system for the mitigation of acid mine drainage at the Williams Brothers Mine (California): pilot-scale study

(2016) Erin J. Clyde et al.   JOURNAL OF CLEANER PRODUCTION

Microbial Ecology and Evolution in the Acid Mine Drainage Model System

(2016) Li-Nan Huang et al.   TRENDS IN MICROBIOLOGY

Fungi Contribute Critical but Spatially Varying Roles in Nitrogen and Carbon Cycling in Acid Mine Drainage

(2016) Annika C. Mosier et al.   Frontiers in Microbiology

Evaluating Enhanced Sulfate Reduction and Optimized Volatile Fatty Acids (VFA) Composition in Anaerobic Reactor by Fe (III) Addition

(2015) Yiwen Liu et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Type of organic carbon amendment influences pH changes in acid sulfate soils in flooded and dry conditions

(2015) Nilmini Jayalath et al.   JOURNAL OF SOILS AND SEDIMENTS

Diversity and Distribution of Arsenic-Related Genes Along a Pollution Gradient in a River Affected by Acid Mine Drainage

(2015) Angélique Desoeuvre et al.   MICROBIAL ECOLOGY

Monthly dynamics of microbial community structure and their controlling factors in three floodplain soils

(2015) M. Moche et al.   SOIL BIOLOGY & BIOCHEMISTRY

Characterization of MtoD from Sideroxydans lithotrophicus: a cytochrome c electron shuttle used in lithoautotrophic growth

(2015) Christopher R. Beckwith et al.   Frontiers in Microbiology

Microbial sulfur transformations in sediments from Subglacial Lake Whillans

(2015) Alicia M. Purcell et al.   Frontiers in Microbiology

The Iron Stimulon and Fur Regulon of Geobacter sulfurreducens and Their Role in Energy Metabolism

(2014) M. Embree et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

Remediation and Selective Recovery of Metals from Acidic Mine Waters Using Novel Modular Bioreactors

(2014) Sabrina Hedrich et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Phylogenetic and environmental diversity of DsrAB-type dissimilatory (bi)sulfite reductases

(2014) Albert Leopold Müller et al.   ISME Journal

Organic wastes as carbon sources to promote sulfate reducing bacterial activity for biological remediation of acid mine drainage

(2014) Mingliang Zhang et al.   MINERALS ENGINEERING

PEAR: a fast and accurate Illumina Paired-End reAd mergeR

(2013) J. Zhang et al.   BIOINFORMATICS

Natural Wetlands Are Efficient at Providing Long-Term Metal Remediation of Freshwater Systems Polluted by Acid Mine Drainage

(2013) Andrew P. Dean et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

The SEED and the Rapid Annotation of microbial genomes using Subsystems Technology (RAST)

(2013) Ross Overbeek et al.   NUCLEIC ACIDS RESEARCH

Influence of waterfall aeration and seasonal temperature variation on the iron and arsenic attenuation rates in an acid mine drainage system

(2012) Chun-Jung Chen et al.   APPLIED GEOCHEMISTRY

Redox Transformations of Iron at Extremely Low pH: Fundamental and Applied Aspects

(2012) D. Barrie Johnson et al.   Frontiers in Microbiology

Effect of Organic Substrate on the Microbial Community Structure in Pilot-Scale Sulfate-Reducing Biochemical Reactors Treating Mine Drainage

(2011) Sage R. Hiibel et al.   ENVIRONMENTAL ENGINEERING SCIENCE

Enrichment of sulfate-reducing bacteria and resulting mineral formation in media mimicking pore water metal ion concentrations and pH conditions of acidic pit lakes

(2011) Jutta Meier et al.   FEMS MICROBIOLOGY ECOLOGY

Biological iron oxidation by Gallionella spp. in drinking water production under fully aerated conditions

(2011) W.W.J.M. de Vet et al.   WATER RESEARCH

A ‘rare biosphere’ microorganism contributes to sulfate reduction in a peatland

(2010) Michael Pester et al.   ISME Journal

The Influence of Phototrophic Biomass on Fe and S Redox Cycling in an Acid Mine Drainage-Impacted System

(2010) John M. Senko et al.   Mine Water and the Environment

Aeration to degas CO2, increase pH, and increase iron oxidation rates for efficient treatment of net alkaline mine drainage

(2009) C.S. Kirby et al.   APPLIED GEOCHEMISTRY

Evaluation of the metabolic diversity of microbial communities in four different filter layers of a constructed wetland with vertical flow by Biolog™ analysis

(2009) S. Salomo et al.   WATER RESEARCH

The metagenomics RAST server – a public resource for the automatic phylogenetic and functional analysis of metagenomes

(2008) F Meyer et al.   BMC BIOINFORMATICS

Occurrence and role of algae and fungi in acid mine drainage environment with special reference to metals and sulfate immobilization

(2008) Bidus Kanti Das et al.   WATER RESEARCH