Heterogeneous graph attention network based on meta-paths for lncRNA–disease association prediction

IPCARF: improving lncRNA-disease association prediction using incremental principal component analysis feature selection and a random forest classifier

(2021) Rong Zhu et al.   BMC BIOINFORMATICS

Predicting human microbe–disease associations via graph attention networks with inductive matrix completion

(2020) Yahui Long et al.   BRIEFINGS IN BIOINFORMATICS

GAERF: predicting lncRNA-disease associations by graph auto-encoder and random forest

(2020) Qing-Wen Wu et al.   BRIEFINGS IN BIOINFORMATICS

Lnc2Cancer 3.0: an updated resource for experimentally supported lncRNA/circRNA cancer associations and web tools based on RNA-seq and scRNA-seq data

(2020) Yue Gao et al.   NUCLEIC ACIDS RESEARCH

Prediction of lncRNA-disease associations by integrating diverse heterogeneous information sources with RWR algorithm and positive pointwise mutual information

(2019) Xiao-Nan Fan et al.   BMC BIOINFORMATICS

LncRNA DANCR contributes to tumor progression via targeting miR-216a-5p in breast cancer

(2019) Weiyang Tao et al.   BIOSCIENCE REPORTS

A novel collaborative filtering model for LncRNA-disease association prediction based on the Naïve Bayesian classifier

(2019) Jingwen Yu et al.   BMC BIOINFORMATICS

LncRNA CRNDE promotes hepatocellular carcinoma progression by upregulating SIX1 through modulating miR‐337‐3p

(2019) Dan Tang et al.   JOURNAL OF CELLULAR BIOCHEMISTRY

Weighted matrix factorization on multi-relational data for LncRNA-disease association prediction

(2019) Yuehui Wang et al.   METHODS

lncRNA SNHG7 sponges miR‐425 to promote proliferation, migration, and invasion of hepatic carcinoma cells via Wnt/β‐catenin/EMT signalling pathway

(2019) Xuebing Yao et al.   CELL BIOCHEMISTRY AND FUNCTION

SNHG5 Promotes Breast Cancer Proliferation by Sponging the miR-154-5p/PCNA Axis

(2019) Jiang-Rui Chi et al.   Molecular Therapy-Nucleic Acids

Silencing lncRNA SNHG6 suppresses proliferation and invasion of breast cancer cells through miR-26a/VASP axis

(2019) Kai Li et al.   PATHOLOGY RESEARCH AND PRACTICE

Neural inductive matrix completion with graph convolutional networks for miRNA-disease association prediction

(2019) Jin Li et al.   BIOINFORMATICS

Long non-coding RNA MIAT is estrogen-responsive and promotes estrogen-induced proliferation in ER-positive breast cancer cells

(2018) Yuehua Li et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

Long non-coding RNA KCNQ1OT1 modulates oxaliplatin resistance in hepatocellular carcinoma through miR-7-5p/ ABCC1 axis

(2018) Huiqin Hu et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

Prediction of lncRNA–disease associations based on inductive matrix completion

(2018) Chengqian Lu et al.   BIOINFORMATICS

SNHG6 Acts as a Genome-Wide Hypomethylation Trigger via Coupling of miR-1297–Mediated S-Adenosylmethionine–Dependent Positive Feedback Loops

(2018) Tao Guo et al.   CANCER RESEARCH

LncRNA CDKN2B-AS1 promotes tumor growth and metastasis of human hepatocellular carcinoma by targeting let-7c-5p/NAP1L1 axis

(2018) Yuqi Huang et al.   CANCER LETTERS

Long non-coding RNA CRNDE promotes the proliferation, migration and invasion of hepatocellular carcinoma cells through miR-217/MAPK1 axis

(2018) Haihao Wang et al.   JOURNAL OF CELLULAR AND MOLECULAR MEDICINE

OUP accepted manuscript

(2018)   NUCLEIC ACIDS RESEARCH

Deregulation of miR-520d-3p promotes hepatocellular carcinoma development via lncRNA MIAT regulation and EPHA2 signaling activation

(2018) Yun Xiang et al.   BIOMEDICINE & PHARMACOTHERAPY

Taurine up-regulated gene 1 functions as a master regulator to coordinate glycolysis and metastasis in hepatocellular carcinoma

(2017) Yang-Hsiang Lin et al.   HEPATOLOGY

Integrating Multiple Heterogeneous Networks for Novel LncRNA-disease Association Inference

(2017) Jingpu Zhang et al.   IEEE-ACM Transactions on Computational Biology and Bioinformatics

Overexpression of Long Non-Coding RNA MEG3 Inhibits Proliferation of Hepatocellular Carcinoma Huh7 Cells via Negative Modulation of miRNA-664

(2017) Jin-Hua He et al.   JOURNAL OF CELLULAR BIOCHEMISTRY

TP73-AS1 promotes breast cancer cell proliferation through miR-200a-mediated TFAM inhibition

(2017) Jia Yao et al.   JOURNAL OF CELLULAR BIOCHEMISTRY

H19/let-7/LIN28 reciprocal negative regulatory circuit promotes breast cancer stem cell maintenance

(2017) Fei Peng et al.   Cell Death & Disease

DANCR Acts as a Diagnostic Biomarker and Promotes Tumor Growth and Metastasis in Hepatocellular Carcinoma

(2016) XIANG MA et al.   ANTICANCER RESEARCH

Downregulated long non-coding RNA MEG3 in breast cancer regulates proliferation, migration and invasion by depending on p53’s transcriptional activity

(2016) Lin Sun et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

Long noncoding RNA SNHG1 predicts a poor prognosis and promotes hepatocellular carcinoma tumorigenesis

(2016) Min Zhang et al.   BIOMEDICINE & PHARMACOTHERAPY

Long Noncoding RNA MALAT1 Promotes Hepatocellular Carcinoma Development by SRSF1 Upregulation and mTOR Activation

(2016) Pushkar Malakar et al.   CANCER RESEARCH

LncRNA Taurine-Upregulated Gene 1 Promotes Cell Proliferation by Inhibiting MicroRNA-9 in MCF-7 Cells

(2016) Xiao-bo Zhao et al.   Journal of Breast Cancer

Downregulation of LncRNA GAS5 causes trastuzumab resistance in breast cancer

(2016) Wentong Li et al.   Oncotarget

Dysregulation of the BRCA1/long non-coding RNA NEAT1 signaling axis contributes to breast tumorigenesis

(2016) Pang-Kuo Lo et al.   Oncotarget

Amplification of Long Noncoding RNA ZFAS1 Promotes Metastasis in Hepatocellular Carcinoma

(2015) T. Li et al.   CANCER RESEARCH

Association between indel polymorphism in the promoter region of lncRNA GAS5 and the risk of hepatocellular carcinoma

(2015) Ruiyang Tao et al.   CARCINOGENESIS

Long noncoding RNADANCRincreases stemness features of hepatocellular carcinoma by derepression ofCTNNB1

(2015) Sheng-xian Yuan et al.   HEPATOLOGY

Long non-coding RNA chromogenic in situ hybridisation signal pattern correlation with breast tumour pathology

(2015) Zhouwei Zhang et al.   JOURNAL OF CLINICAL PATHOLOGY

Long non-coding RNA TUG1 is up-regulated in hepatocellular carcinoma and promotes cell growth and apoptosis by epigenetically silencing of KLF2

(2015) Ming-De Huang et al.   Molecular Cancer

Long noncoding RNA GAS5 suppresses the migration and invasion of hepatocellular carcinoma cells via miR-21

(2015) Litian Hu et al.   TUMOR BIOLOGY

Circulating long noncoding RNA GAS5 as a potential biomarker in breast cancer for assessing the surgical effects

(2015) Lu Han et al.   TUMOR BIOLOGY

Reciprocal regulation of Hsa-miR-1 and long noncoding RNA MALAT1 promotes triple-negative breast cancer development

(2015) Chuan Jin et al.   TUMOR BIOLOGY

Expression analysis of four long noncoding RNAs in breast cancer

(2015) Mostafa Iranpour et al.   TUMOR BIOLOGY

The Precision-Recall Plot Is More Informative than the ROC Plot When Evaluating Binary Classifiers on Imbalanced Datasets

(2015) Takaya Saito et al.   PLoS One

17β-Estradiol treatment inhibits breast cell proliferation, migration and invasion by decreasing MALAT-1 RNA level

(2014) Ziyi Zhao et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

Unbiased analysis of potential targets of breast cancer susceptibility loci by Capture Hi-C

(2014) Nicola H. Dryden et al.   GENOME RESEARCH

Cancer incidence and mortality worldwide: Sources, methods and major patterns in GLOBOCAN 2012

(2014) Jacques Ferlay et al.   INTERNATIONAL JOURNAL OF CANCER

Tumor hypoxia induces nuclear paraspeckle formation through HIF-2α dependent transcriptional activation of NEAT1 leading to cancer cell survival

(2014) H Choudhry et al.   ONCOGENE

Long non-coding RNA PVT1 is associated with tumor progression and predicts recurrence in hepatocellular carcinoma patients

(2014) CHAOFENG DING et al.   Oncology Letters

Novel human lncRNA–disease association inference based on lncRNA expression profiles

(2013) Xing Chen et al.   BIOINFORMATICS

Epigenetic activation of the MiR-200 family contributes to H19-mediated metastasis suppression in hepatocellular carcinoma

(2012) Ling Zhang et al.   CARCINOGENESIS

The GENCODE v7 catalog of human long noncoding RNAs: Analysis of their gene structure, evolution, and expression

(2012) T. Derrien et al.   GENOME RESEARCH

Modular regulatory principles of large non-coding RNAs

(2012) Mitchell Guttman et al.   NATURE

Genetic variants at the 9p21 locus contribute to atherosclerosis through modulation of ANRIL and CDKN2A/B

(2011) Ada Congrains et al.   ATHEROSCLEROSIS

Gaussian interaction profile kernels for predicting drug–target interaction

(2011) Twan van Laarhoven et al.   BIOINFORMATICS

Molecular Mechanisms of Long Noncoding RNAs

(2011) Kevin C. Wang et al.   MOLECULAR CELL

Long non-coding RNAs in Huntington's disease neurodegeneration

(2011) Rory Johnson   NEUROBIOLOGY OF DISEASE

Long noncoding RNAs and human disease

(2011) Orly Wapinski et al.   TRENDS IN CELL BIOLOGY

Inferring the human microRNA functional similarity and functional network based on microRNA-associated diseases

(2010) Dong Wang et al.   BIOINFORMATICS

Expression of a noncoding RNA is elevated in Alzheimer's disease and drives rapid feed-forward regulation of β-secretase

(2008) Mohammad Ali Faghihi et al.   NATURE MEDICINE