DeepCap-Kcr: accurate identification and investigation of protein lysine crotonylation sites based on capsule network

UbiComb: A Hybrid Deep Learning Model for Predicting Plant-Specific Protein Ubiquitylation Sites

(2021) Arslan Siraj et al.   Genes

MSIT: Malonylation Sites Identification Tree

(2020) Wenzheng Bao et al.   Current Bioinformatics

A deep learning method for motor fault diagnosis based on a capsule network with gate-structure dilated convolutions

(2020) Yu Liang et al.   NEURAL COMPUTING & APPLICATIONS

i6mA-stack: A stacking ensemble-based computational prediction of DNA N6-methyladenine (6mA) sites in the Rosaceae genome

(2020) Jhabindra Khanal et al.   GENOMICS

Prediction of mRNA subcellular localization using deep recurrent neural networks

(2019) Zichao Yan et al.   BIOINFORMATICS

Functions and mechanisms of lysine crotonylation

(2019) Junhu Wan et al.   JOURNAL OF CELLULAR AND MOLECULAR MEDICINE

County-Level Soybean Yield Prediction Using Deep CNN-LSTM Model

(2019) Jie Sun et al.   SENSORS

Global involvement of lysine crotonylation in protein modification and transcription regulation in rice

(2018) Shuai Liu et al.   MOLECULAR & CELLULAR PROTEOMICS

Quantitative Crotonylome Analysis Expands the Roles of p300 in the Regulation of Lysine Crotonylation Pathway

(2018) He Huang et al.   PROTEOMICS

Facial expression recognition using feature additive pooling and progressive fine-tuning of CNN

(2018) Sang Wook Lee et al.   ELECTRONICS LETTERS

Capsule network for protein post-translational modification site prediction

(2018) Duolin Wang et al.   BIOINFORMATICS

A primer on deep learning in genomics

(2018) James Zou et al.   NATURE GENETICS

iKcr-PseEns: Identify lysine crotonylation sites in histone proteins with pseudo components and ensemble classifier

(2017) Wang-Ren Qiu et al.   GENOMICS

Prediction of lysine crotonylation sites by incorporating the composition of k -spaced amino acid pairs into Chou’s general PseAAC

(2017) Zhe Ju et al.   JOURNAL OF MOLECULAR GRAPHICS & MODELLING

Ultradeep Lysine Crotonylome Reveals the Crotonylation Enhancement on Both Histones and Nonhistone Proteins by SAHA Treatment

(2017) Quan Wu et al.   JOURNAL OF PROTEOME RESEARCH

Large-Scale Identification of Protein Crotonylation Reveals Its Role in Multiple Cellular Functions

(2017) Wei Wei et al.   JOURNAL OF PROTEOME RESEARCH

Deep CNNs Along the Time Axis With Intermap Pooling for Robustness to Spectral Variations

(2016) Hwaran Lee et al.   IEEE SIGNAL PROCESSING LETTERS

Metabolic Regulation of Gene Expression by Histone Lysine β-Hydroxybutyrylation

(2016) Zhongyu Xie et al.   MOLECULAR CELL

Metabolic regulation of gene expression through histone acylations

(2016) Benjamin R. Sabari et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

Lysine Glutarylation Is a Protein Posttranslational Modification Regulated by SIRT5

(2014) Minjia Tan et al.   Cell Metabolism

Lysine 2-hydroxyisobutyrylation is a widely distributed active histone mark

(2014) Lunzhi Dai et al.   Nature Chemical Biology

50 years of protein acetylation: from gene regulation to epigenetics, metabolism and beyond

(2014) Eric Verdin et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

Lysine Succinylation and Lysine Malonylation in Histones

(2012) Zhongyu Xie et al.   MOLECULAR & CELLULAR PROTEOMICS

Identification of 67 Histone Marks and Histone Lysine Crotonylation as a New Type of Histone Modification

(2011) Minjia Tan et al.   CELL

Histone onco-modifications

(2011) J Füllgrabe et al.   ONCOGENE

Aberrant Epigenetic Landscape in Cancer: How Cellular Identity Goes Awry

(2010) María Berdasco et al.   DEVELOPMENTAL CELL