Predicting the multi-label protein subcellular localization through multi-information fusion and MLSI dimensionality reduction based on MLFE classifier

Prediction of protein-protein interactions based on elastic net and deep forest

(2021) Bin Yu et al.   EXPERT SYSTEMS WITH APPLICATIONS

SARS-CoV-2 Cell Entry Depends on ACE2 and TMPRSS2 and Is Blocked by a Clinically Proven Protease Inhibitor

(2020) Markus Hoffmann et al.   CELL

Active k-Labelsets Ensemble for Multi-label Classification

(2020) Ran Wang et al.   PATTERN RECOGNITION

MpsLDA-ProSVM: Predicting multi-label protein subcellular localization by wMLDAe dimensionality reduction and ProSVM classifier

(2020) Qi Zhang et al.   CHEMOMETRICS AND INTELLIGENT LABORATORY SYSTEMS

StackPDB: Predicting DNA-binding proteins based on XGB-RFE feature optimization and stacked ensemble classifier

(2020) Qingmei Zhang et al.   APPLIED SOFT COMPUTING

SubMito-XGBoost: predicting protein submitochondrial localization by fusing multiple feature information and eXtreme gradient boosting

(2019) Bin Yu et al.   BIOINFORMATICS

Critical evaluation of web-based prediction tools for human protein subcellular localization

(2019) Yinan Shen et al.   BRIEFINGS IN BIOINFORMATICS

Manifold regularized discriminative feature selection for multi-label learning

(2019) Jia Zhang et al.   PATTERN RECOGNITION

Plant-mSubP: a computational framework for the prediction of single and multi-target protein subcellular localization using integrated machine-learning approaches

(2019) Sitanshu S Sahu et al.   AoB Plants

O-GlcNAcPRED-II: an integrated classification algorithm for identifying O-GlcNAcylation sites based on fuzzy undersampling and a K-means PCA oversampling technique

(2018) Cangzhi Jia et al.   BIOINFORMATICS

Prediction of subcellular location of apoptosis proteins by incorporating PsePSSM and DCCA coefficient based on LFDA dimensionality reduction

(2018) Bin Yu et al.   BMC GENOMICS

Distributed nearest neighbor classification for large-scale multi-label data on spark

(2018) Jorge Gonzalez-Lopez et al.   Future Generation Computer Systems-The International Journal of eScience

MetaGO: Predicting Gene Ontology of Non-homologous Proteins Through Low-Resolution Protein Structure Prediction and Protein–Protein Network Mapping

(2018) Chengxin Zhang et al.   JOURNAL OF MOLECULAR BIOLOGY

Defining the physiological role of SRP in protein-targeting efficiency and specificity

(2018) Elizabeth A. Costa et al.   SCIENCE

Protein–protein interaction sites prediction by ensemble random forests with synthetic minority oversampling technique

(2018) Xiaoying Wang et al.   BIOINFORMATICS

Predicting drug-target interactions using Lasso with random forest based on evolutionary information and chemical structure

(2018) Han Shi et al.   GENOMICS

Identification of protein subcellular localization via integrating evolutionary and physicochemical information into Chou’s general PseAAC

(2018) Yinan Shen et al.   JOURNAL OF THEORETICAL BIOLOGY

A multi-label feature extraction algorithm via maximizing feature variance and feature-label dependence simultaneously

(2016) Jianhua Xu et al.   KNOWLEDGE-BASED SYSTEMS

mPLR-Loc: An adaptive decision multi-label classifier based on penalized logistic regression for protein subcellular localization prediction

(2015) Shibiao Wan et al.   ANALYTICAL BIOCHEMISTRY

Multi-location gram-positive and gram-negative bacterial protein subcellular localization using gene ontology and multi-label classifier ensemble

(2015) Xiao Wang et al.   BMC BIOINFORMATICS

Lift: Multi-Label Learning with Label-Specific Features

(2015) Min-Ling Zhang et al.   IEEE TRANSACTIONS ON PATTERN ANALYSIS AND MACHINE INTELLIGENCE

Gram-positive and Gram-negative protein subcellular localization by incorporating evolutionary-based descriptors into Chou׳s general PseAAC

(2015) Abdollah Dehzangi et al.   JOURNAL OF THEORETICAL BIOLOGY

Predicting subcellular localization of multi-location proteins by improving support vector machines with an adaptive-decision scheme

(2015) Shibiao Wan et al.   International Journal of Machine Learning and Cybernetics

Prediction of protein-protein interactions from amino acid sequences using a novel multi-scale continuous and discontinuous feature set

(2014) Zhu-Hong You et al.   BMC BIOINFORMATICS

HybridGO-Loc: Mining Hybrid Features on Gene Ontology for Predicting Subcellular Localization of Multi-Location Proteins

(2014) Shibiao Wan et al.   PLoS One

mGOASVM: Multi-label protein subcellular localization based on gene ontology and support vector machines

(2012) Shibiao Wan et al.   BMC BIOINFORMATICS

Virus-mPLoc: A Fusion Classifier for Viral Protein Subcellular Location Prediction by Incorporating Multiple Sites

(2012) Hong-Bin Shen et al.   JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS

iLoc-Gpos: A Multi-Layer Classifier for Predicting the Subcellular Localization of Singleplex and Multiplex Gram-Positive Bacterial Proteins

(2012) Zhi-Cheng Wu et al.   PROTEIN AND PEPTIDE LETTERS

A Multi-Label Classifier for Predicting the Subcellular Localization of Gram-Negative Bacterial Proteins with Both Single and Multiple Sites

(2011) Xuan Xiao et al.   PLoS One

Random k-Labelsets for Multilabel Classification

(2010) Grigorios Tsoumakas et al.   IEEE TRANSACTIONS ON KNOWLEDGE AND DATA ENGINEERING

On Position-Specific Scoring Matrix for Protein Function Prediction

(2010) Jong Cheol Jeong et al.   IEEE-ACM Transactions on Computational Biology and Bioinformatics

Plant-mPLoc: A Top-Down Strategy to Augment the Power for Predicting Plant Protein Subcellular Localization

(2010) Kuo-Chen Chou et al.   PLoS One

Ml-rbf: RBF Neural Networks for Multi-Label Learning

(2009) Min-Ling Zhang   NEURAL PROCESSING LETTERS

ProLoc-GO: Utilizing informative Gene Ontology terms for sequence-based prediction of protein subcellular localization

(2008) Wen-Lin Huang et al.   BMC BIOINFORMATICS