Responses of nitrification and bacterial community in three size aggregates of paddy soil to both of initial fertility and biochar addition

Effects of Zeolite and Biochar Addition on Ammonia-Oxidizing Bacteria and Ammonia-Oxidizing Archaea Communities during Agricultural Waste Composting

(2020) Xin Wu et al.   Sustainability

Tax4Fun2: prediction of habitat-specific functional profiles and functional redundancy based on 16S rRNA gene sequences

(2020) Franziska Wemheuer et al.   Environmental Microbiome

Effect of biogas slurry addition on soil properties, yields, and bacterial composition in the rice-rape rotation ecosystem over 3 years

(2019) Min Xu et al.   JOURNAL OF SOILS AND SEDIMENTS

Effects of six-year biochar amendment on soil aggregation, crop growth, and nitrogen and phosphorus use efficiencies in a rice-wheat rotation

(2019) Qianqian Zhang et al.   JOURNAL OF CLEANER PRODUCTION

Application of organic fertilizer improves microbial community diversity and alters microbial network structure in tea (Camellia sinensis) plantation soils

(2019) Songsong Gu et al.   SOIL & TILLAGE RESEARCH

Land use change effects on diversity of soil bacterial, Acidobacterial and fungal communities in wetlands of the Sanjiang Plain, northeastern China

(2019) Xin Sui et al.   Scientific Reports

Biochar amendment decreases soil microbial biomass and increases bacterial diversity in Moso bamboo (Phyllostachys edulis) plantations under simulated nitrogen deposition

(2018) Quan Li et al.   Environmental Research Letters

Responses of fungal–bacterial community and network to organic inputs vary among different spatial habitats in soil

(2018) Wei Zheng et al.   SOIL BIOLOGY & BIOCHEMISTRY

Paddy-upland rotation for sustainable agriculture with regards to diverse soil microbial community

(2018) Ping-Fu Hou et al.   Scientific Reports

Bacterial Preferences for Specific Soil Particle Size Fractions Revealed by Community Analyses

(2018) Michael Hemkemeyer et al.   Frontiers in Microbiology

Effect of long-term fertilization strategies on bacterial community composition in a 35-year field experiment of Chinese Mollisols

(2018) Mingchao Ma et al.   AMB Express

Effects of combined organic manure and mineral fertilization on soil aggregation and aggregate-associated organic carbon in two agricultural soils

(2018) Wenhai Mi et al.   JOURNAL OF PLANT NUTRITION

Biochar additions alter phosphorus and nitrogen availability in agricultural ecosystems: A meta-analysis

(2018) Si Gao et al.   SCIENCE OF THE TOTAL ENVIRONMENT

High temperature-produced biochar can be efficient in nitrate loss prevention and carbon sequestration

(2018) Niguss Solomon Hailegnaw et al.   GEODERMA

Soil aggregate size and long-term fertilization effects on the function and community of ammonia oxidizers

(2018) Pei-Pei Li et al.   GEODERMA

Effects of biochar on soil available inorganic nitrogen: A review and meta-analysis

(2017) Thi Thu Nhan Nguyen et al.   GEODERMA

Nematode grazing promotes bacterial community dynamics in soil at the aggregate level

(2017) Yuji Jiang et al.   ISME Journal

Biochar decreases nitrogen oxide and enhances methane emissions via altering microbial community composition of anaerobic paddy soil

(2017) Ning Wang et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Stoichiometric ratio of dissolved organic carbon to nitrate regulates nitrous oxide emission from the biochar-amended soils

(2017) Z.M. Lan et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Response of ammonia-oxidizing archaea and bacteria in calcareous soil to mineral and organic fertilizer application and their relative contribution to nitrification

(2017) Rui Tao et al.   SOIL BIOLOGY & BIOCHEMISTRY

Variable responses of ammonia oxidizers across soil particle-size fractions affect nitrification in a long-term fertilizer experiment

(2017) Qian Zhang et al.   SOIL BIOLOGY & BIOCHEMISTRY

Wheat straw-derived biochar amendment stimulated N 2 O emissions from rice paddy soils by regulating the amoA genes of ammonia-oxidizing bacteria

(2017) Yongxin Lin et al.   SOIL BIOLOGY & BIOCHEMISTRY

Ammonia-oxidizing microorganisms: key players in the promotion of plant growth

(2017) Adenike Eunice Amoo et al.   Journal of Soil Science and Plant Nutrition

Microbial community analysis of apple rhizosphere around Bohai Gulf

(2017) Jihang Jiang et al.   Scientific Reports

Microbial community structure and predicted bacterial metabolic functions in biochar pellets aged in soil after 34 months

(2016) Daquan Sun et al.   APPLIED SOIL ECOLOGY

Agronomic and remedial benefits and risks of applying biochar to soil: Current knowledge and future research directions

(2016) Saranya Kuppusamy et al.   ENVIRONMENT INTERNATIONAL

Impacts of continuous excessive fertilization on soil potential nitrification activity and nitrifying microbial community dynamics in greenhouse system

(2016) Jiangpei Han et al.   JOURNAL OF SOILS AND SEDIMENTS

The effects of rice-straw biochar addition on nitrification activity and nitrous oxide emissions in two Oxisols

(2016) Lili He et al.   SOIL & TILLAGE RESEARCH

Meta-analysis reveals ammonia-oxidizing bacteria respond more strongly to nitrogen addition than ammonia-oxidizing archaea

(2016) Chelsea J. Carey et al.   SOIL BIOLOGY & BIOCHEMISTRY

Tax4Fun: predicting functional profiles from metagenomic 16S rRNA data: Fig. 1.

(2015) Kathrin P. Aßhauer et al.   BIOINFORMATICS

Error filtering, pair assembly and error correction for next-generation sequencing reads

(2015) Robert C. Edgar et al.   BIOINFORMATICS

Comparison of straw-biochar-mediated changes in nitrification and ammonia oxidizers in agricultural oxisols and cambosols

(2015) Lili He et al.   BIOLOGY AND FERTILITY OF SOILS

Warming effects on biomass and composition of microbial communities and enzyme activities within soil aggregates in subtropical forest

(2015) Xiong Fang et al.   BIOLOGY AND FERTILITY OF SOILS

Reduced nitrification and abundance of ammonia-oxidizing bacteria in acidic soil amended with biochar

(2015) Zhenyu Wang et al.   CHEMOSPHERE

Nitrogen, Phosphorus, and Potassium Availability in Manure- and Sewage Sludge–Applied Soil

(2015) V. Antoniadis et al.   COMMUNICATIONS IN SOIL SCIENCE AND PLANT ANALYSIS

Effects of 44 years of chronic nitrogen fertilization on the soil nitrifying community of permanent grassland

(2015) Xue Zhou et al.   SOIL BIOLOGY & BIOCHEMISTRY

Genomic resolution of linkages in carbon, nitrogen, and sulfur cycling among widespread estuary sediment bacteria

(2015) Brett J Baker et al.   Microbiome

Comparative analysis of the microbial communities in agricultural soil amended with enhanced biochars or traditional fertilisers

(2014) Shaun Nielsen et al.   AGRICULTURE ECOSYSTEMS & ENVIRONMENT

Changes in soil microbial community composition in response to fertilization of paddy soils in subtropical China

(2014) Wen-Yi Dong et al.   APPLIED SOIL ECOLOGY

Biochar Impacts Soil Microbial Community Composition and Nitrogen Cycling in an Acidic Soil Planted with Rape

(2014) Hui-Juan Xu et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Differential contributions of ammonia oxidizers and nitrite oxidizers to nitrification in four paddy soils

(2014) Baozhan Wang et al.   ISME Journal

Biochar Decelerates Soil Organic Nitrogen Cycling but Stimulates Soil Nitrification in a Temperate Arable Field Trial

(2014) Judith Prommer et al.   PLoS One

Influence of 20–Year Organic and Inorganic Fertilization on Organic Carbon Accumulation and Microbial Community Structure of Aggregates in an Intensively Cultivated Sandy Loam Soil

(2014) Huanjun Zhang et al.   PLoS One

Effects of Feedstock and Pyrolysis Temperature on Biochar Adsorption of Ammonium and Nitrate

(2014) Xiapu Gai et al.   PLoS One

Biochar addition affected the dynamics of ammonia oxidizers and nitrification in microcosms of a coastal alkaline soil

(2013) Yanjing Song et al.   BIOLOGY AND FERTILITY OF SOILS

Microbial community responses to anthropogenically induced environmental change: towards a systems approach

(2013) Andrew Bissett et al.   ECOLOGY LETTERS

Soil aggregate stratification of nematodes and ammonia oxidizers affects nitrification in an acid soil

(2013) Yuji Jiang et al.   ENVIRONMENTAL MICROBIOLOGY

Soil aggregation and distribution of carbon and nitrogen in different fractions after 41years long-term fertilizer experiment in tropical rice–rice system

(2013) Rahul Tripathi et al.   GEODERMA

UPARSE: highly accurate OTU sequences from microbial amplicon reads

(2013) Robert C Edgar   NATURE METHODS

Urea- and nitrapyrin-affected N2O emission is coupled mainly with ammonia oxidizing bacteria growth in microcosms of three typical Chinese arable soils

(2013) Peiyuan Cui et al.   SOIL BIOLOGY & BIOCHEMISTRY

A Review of Biochar and Soil Nitrogen Dynamics

(2013) Tim Clough et al.   Agronomy-Basel

Ecophysiological Characterization of Ammonia-Oxidizing Archaea and Bacteria from Freshwater

(2012) Elizabeth French et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Environmental Benefits of Biochar

(2012) James A. Ippolito et al.   JOURNAL OF ENVIRONMENTAL QUALITY

Evaluation of general 16S ribosomal RNA gene PCR primers for classical and next-generation sequencing-based diversity studies

(2012) Anna Klindworth et al.   NUCLEIC ACIDS RESEARCH

Biochar induced soil microbial community change: Implications for biogeochemical cycling of carbon, nitrogen and phosphorus

(2011) Craig R. Anderson et al.   PEDOBIOLOGIA

Biochar adsorbed ammonia is bioavailable

(2011) Arezoo Taghizadeh-Toosi et al.   PLANT AND SOIL

Biochar effects on soil biota – A review

(2011) Johannes Lehmann et al.   SOIL BIOLOGY & BIOCHEMISTRY

Nitrogen and Phosphorus Availability in Biochar-Amended Soils

(2011) Nathan O. Nelson et al.   SOIL SCIENCE

Metagenomic biomarker discovery and explanation

(2011) Nicola Segata et al.   GENOME BIOLOGY

The Influence of Different Land Uses on the Structure of Archaeal Communities in Amazonian Anthrosols Based on 16S rRNA and amoA Genes

(2010) Rodrigo Gouvêa Taketani et al.   MICROBIAL ECOLOGY

Bacteriarather thanArchaeadominate microbial ammonia oxidation in an agricultural soil

(2009) Zhongjun Jia et al.   ENVIRONMENTAL MICROBIOLOGY

Stimulation of r- vs. K-selected microorganisms by elevated atmospheric CO2 depends on soil aggregate size

(2009) Maxim Dorodnikov et al.   FEMS MICROBIOLOGY ECOLOGY

Stimulation of microbial extracellular enzyme activities by elevated CO2depends on soil aggregate size

(2009) MAXIM DORODNIKOV et al.   GLOBAL CHANGE BIOLOGY

The effects of mineral fertilizer and organic manure on soil microbial community and diversity

(2009) Wenhui Zhong et al.   PLANT AND SOIL