Assessment of Carbon Substrate Catabolism Pattern and Functional Metabolic Pathway for Microbiota of Limestone Caves

Spectral Composition of Sunlight Affects the Microbial Functional Structure of Beech Leaf Litter During the Initial Phase of Decomposition

(2020) Marta Pieristè et al.   PLANT AND SOIL

Microbial carbon source utilization in rice rhizosphere and nonrhizosphere soils with short-term manure N input rate in paddy field

(2020) Tang Haiming et al.   Scientific Reports

Decomposition of Organic Matter in Caves

(2020) Nynne Rand Ravn et al.   Frontiers in Ecology and Evolution

Microbially induced calcium carbonate precipitation: a widespread phenomenon in the biological world

(2019) Mostafa Seifan et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Shotgun metagenomic sequencing from Manao-Pee cave, Thailand, reveals insight into the microbial community structure and its metabolic potential

(2019) Apirak Wiseschart et al.   BMC MICROBIOLOGY

Direct Observations of the Occlusion of Soil Organic Matter within Calcite

(2019) Jialin Chi et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Diversity of tetracycline- and erythromycin-resistant bacteria in aerosols and manures from four types of animal farms in China

(2019) Mo Chen et al.   ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH

Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2

(2019) Evan Bolyen et al.   NATURE BIOTECHNOLOGY

Diversity, Distribution and Co-occurrence Patterns of Bacterial Communities in a Karst Cave System

(2019) Hai-Zhen Zhu et al.   Frontiers in Microbiology

Microbially Induced Carbonate Precipitation Using Microorganisms Enriched from Calcareous Materials in Marine Environments and Their Metabolites

(2019) Yumi Kim et al.   Minerals

Microplot long-term experiment reveals strong soil type influence on bacteria composition and its functional diversity

(2018) Jarosław Grządziel et al.   APPLIED SOIL ECOLOGY

Environmental effects of ozone depletion, UV radiation and interactions with climate change: UNEP Environmental Effects Assessment Panel, update 2017

(2018) A. F. Bais et al.   PHOTOCHEMICAL & PHOTOBIOLOGICAL SCIENCES

Metagenomics of Bacterial Diversity in Villa Luz Caves with Sulfur Water Springs

(2018) Giuseppe D’Auria et al.   Genes

Microbiome and ecotypic adaption of Holcus lanatus (L.) to extremes of its soil pH range, investigated through transcriptome sequencing

(2018) Ellen Young et al.   Microbiome

Community-Level Physiological Profiles of Microorganisms from Different Types of Soil That are Characteristic to Poland—a Long-Term Microplot Experiment

(2018) Jarosław Grządziel et al.   Sustainability

Biogeochemistry of soil organic matter in agroecosystems & environmental implications

(2018) Gabrijel Ondrasek et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Microbial communities in carbonate rocks-from soil via groundwater to rocks

(2017) Aileen Meier et al.   JOURNAL OF BASIC MICROBIOLOGY

Organic matter processing by microbial communities throughout the Atlantic water column as revealed by metaproteomics

(2017) Kristin Bergauer et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Influence of red mud on soil microbial communities: Application and comprehensive evaluation of the Biolog EcoPlate approach as a tool in soil microbiological studies

(2017) Viktória Feigl et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Photochemical alteration of organic carbon draining permafrost soils shifts microbial metabolic pathways and stimulates respiration

(2017) Collin P. Ward et al.   Nature Communications

Application of microorganisms in concrete: a promising sustainable strategy to improve concrete durability

(2016) Jianyun Wang et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Metabolic network architecture and carbon source determine metabolite production costs

(2016) Silvio Waschina et al.   FEBS Journal

Formations of calcium carbonate minerals by bacteria and its multiple applications

(2016) Periasamy Anbu et al.   SpringerPlus

Banking carbon: a review of organic carbon storage and physical factors influencing retention in floodplains and riparian ecosystems

(2015) Nicholas A. Sutfin et al.   EARTH SURFACE PROCESSES AND LANDFORMS

Microbial Diversity in Caves

(2015) Karolina Tomczyk-Żak et al.   GEOMICROBIOLOGY JOURNAL

Formation of soil organic matter via biochemical and physical pathways of litter mass loss

(2015) M. Francesca Cotrufo et al.   Nature Geoscience

Evaluation of Community-Level Physiological Profiling for Monitoring Microbial Community Function in Aquaculture Ponds

(2015) Gerald L. Kurten et al.   NORTH AMERICAN JOURNAL OF AQUACULTURE

Profiling bacterial diversity in a limestone cave of the western Loess Plateau of China

(2015) Yucheng Wu et al.   Frontiers in Microbiology

Diversity of thermophiles in a Malaysian hot spring determined using 16S rRNA and shotgun metagenome sequencing

(2015) Chia Sing Chan et al.   Frontiers in Microbiology

The Application of the Biolog EcoPlate Approach in Ecotoxicological Evaluation of Dairy Sewage Sludge

(2014) Agata Gryta et al.   APPLIED BIOCHEMISTRY AND BIOTECHNOLOGY

Microbiology of Movile Cave—A Chemolithoautotrophic Ecosystem

(2014) Deepak Kumaresan et al.   GEOMICROBIOLOGY JOURNAL

Community level physiological profiles of bacterial communities inhabiting uranium mining impacted sites

(2013) Anelia Kenarova et al.   ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY

Making a living while starving in the dark: metagenomic insights into the energy dynamics of a carbonate cave

(2013) Marianyoly Ortiz et al.   ISME Journal

Quality-filtering vastly improves diversity estimates from Illumina amplicon sequencing

(2012) Nicholas A Bokulich et al.   NATURE METHODS

ABC solute importers in bacteria

(2011) Jinming Cui et al.   Essays in Biochemistry

Soil engineering in vivo: harnessing natural biogeochemical systems for sustainable, multi-functional engineering solutions

(2010) J. T. DeJong et al.   Journal of the Royal Society Interface

Life without light: microbial diversity and evidence of sulfur- and ammonium-based chemolithotrophy in Movile Cave

(2009) Yin Chen et al.   ISME Journal

Evaluation of the metabolic diversity of microbial communities in four different filter layers of a constructed wetland with vertical flow by Biolog™ analysis

(2009) S. Salomo et al.   WATER RESEARCH