Article
Mathematics, Interdisciplinary Applications
Emilio Porcu, Pier Giovanni Bissiri, Felipe Tagle, Ruben Soza, Fernando A. Quintana
Summary: This study introduces a nonparametric spectral approach to modeling correlation functions on spheres, treating the sequence of Schoenberg coefficients and their associated covariance functions as random. The stick-breaking representation for the spectrum is proposed and shown to span the support of geodesically isotropic covariance functions under uniform convergence. The properties of the posterior, regarding existence, uniqueness, and Lipschitz continuity, are examined, and validated using MCMC simulations with global surface temperature data.
Article
Multidisciplinary Sciences
Marco Uttieri, Peter Hinow, Raffaele Pastore, Giuseppe Bianco, Maurizio Ribera d'Alcala, Maria Grazia Mazzocchi
Summary: The study found that crowding does not impact the swimming characteristics of C. typicus within a certain density range, showing stable swimming performance. Various effects such as glassy dynamics and swarming do not have a significant impact on the swimming behavior of copepods.
JOURNAL OF THE ROYAL SOCIETY INTERFACE
(2021)
Article
Mathematics, Interdisciplinary Applications
Xuemin Wang, Jiaqi Fan
Summary: This study focuses on n-level Sierpinski carpets, including the classic one for n = 3, which are non-p.c.f. self-similar fractals. Through the use of finitely many geometric patterns and self-similar measure, the mean geodesic distance on the n-level Sierpinski carpets and their skeleton networks is obtained.
FRACTALS-COMPLEX GEOMETRY PATTERNS AND SCALING IN NATURE AND SOCIETY
(2021)
Article
Mathematics, Interdisciplinary Applications
Alireza Khalili Golmankhaneh, Lilian Aurora Ochoa Ontiveros
Summary: This paper presents a generalization of diffusion on fractal combs using fractal calculus, including the concepts, definitions of derivatives and integrals, derivation and solution of the Fokker-Planck equation, study of Brownian motion, and proposal and solution of the heat equation on fractal combs.
CHAOS SOLITONS & FRACTALS
(2023)
Article
Agronomy
Josafhat Salinas-Ruiz, Sandra Luz Hernandez-Valladolid, Juan Valente Hidalgo-Contreras, Juan Manuel Romero-Padilla
Summary: Mixed models are useful for analyzing sugarcane field trials and determining the best model for estimating cane stalk yield of sugarcane varieties. The research highlights the need for improving the process of finding an appropriate mixed model for more accurate recommendations in the sugarcane industry.
Article
Mathematics, Applied
Yaswanth Sai Jetti, Emilio Porcu, Martin Ostoja-Starzewski
Summary: A new parametric class of covariance functions that can be applied to wide-sense homogeneous and isotropic random fields on Euclidean spaces is introduced. This class exhibits uncoupled fractal and Hurst effects and is shown to include the Generalized Cauchy and Dagum models. Furthermore, product-based covariance models are developed using the new functions, along with parametric conditions to ensure the decoupling of fractal and Hurst effects.
ZEITSCHRIFT FUR ANGEWANDTE MATHEMATIK UND PHYSIK
(2023)
Article
Physics, Applied
Cheng Zeng, Yuke Huang, Yumei Xue
Summary: The Fermat point is the point in a triangle that has the minimum total distance from the three vertices. This paper explores the Fermat distance on various networks and reveals the relationship between the mean Fermat distance and the mean geodesic distance. It also demonstrates the small-world effect of the networks studied.
MODERN PHYSICS LETTERS B
(2022)
Article
Mathematics, Interdisciplinary Applications
Lei Lei, Qi Jia, Bing Zhao
Summary: The Steiner distance between four given points is the minimum total geodesic distance within the metric space to another point. For Vicsek networks, the asymptotic formula for their mean Steiner distances is obtained using the method of finite pattern.
FRACTALS-COMPLEX GEOMETRY PATTERNS AND SCALING IN NATURE AND SOCIETY
(2021)
Article
Statistics & Probability
Runze Li, Kai Xu, Yeqing Zhou, Liping Zhu
Summary: In this article, we propose a novel test based on an aggregation of the marginal cumulative covariances to accommodate heteroscedasticity and high dimensionality in high-dimensional data. Our proposed test statistic is scale-invariance, tuning-free, and easy to implement, with established asymptotic normality under the null hypothesis. We find that our proposed test is much more powerful than existing competitors for covariates with heterogeneous variances, even under high-dimensional linear models, while maintaining high efficiency for homoscedastic covariates.
JOURNAL OF THE AMERICAN STATISTICAL ASSOCIATION
(2023)
Article
Physics, Applied
Bing Wang, Jia Zhu, Daijun Wei
Summary: This paper explores the self-similarity of complex networks using the degree-degree distance, proposing a box-covering algorithm to calculate the dimension of networks based on this distance. The results show that some complex networks exhibit self-similarity from the perspective of degree-degree distance, indicating the reasonableness of the proposed method.
MODERN PHYSICS LETTERS B
(2021)
Article
Statistics & Probability
Lewis R. Blake, Emilio Porcu, Dorit M. Hammerling
Summary: Gaussian Processes are powerful tools for spatial data modeling. In this work, we focus on specifying the symmetric and positive definite covariance function, which has traditionally been defined and used in Euclidean space. However, considering Earth's geometry becomes increasingly important when dealing with data collected from the globe. We survey recent developments related to constructing nonstationary covariance functions on spheres and provide three general forms for families of parametric nonstationary covariance functions.
Article
Engineering, Civil
Nawei Liu, Fei Xie, Zhenhong Lin, Mingzhou Jin
Summary: This study developed 98 regression models for estimating shortest distances based on great circle distances along U.S. interstate highways and for each state, showing that models without intercepts generally have better fitness and significant variations in slope coefficients exist at the state level. Additionally, a preliminary analysis of the effect of highway density on this variation was conducted.
TRANSPORTATION RESEARCH RECORD
(2021)
Article
Engineering, Marine
Yi Huang, Yuminghao Xiao, Hongdong Wang, Hong Yi
Summary: In this paper, a solution to realize globe-wide real-time route planning is proposed using an oceanic shortcut network (OSN). The proposed OSN consists of a base graph and a fast-forwarding graph, and the A* graph-search algorithm is applied to find the shortest path between given starting and end points. The algorithm eliminates the angular bias problem and follows optimal routes. The use of great circle distance accurately approximates distances on a spherical surface. The algorithm is validated through experiments, demonstrating reduced total distance and improved time efficiency.
Article
Engineering, Geological
He Tian, Zhonghui Li, Shan Yin, Yueyu Lei, Yue Niu, Xinyu Wang, Zesheng Zang, Zhoujie Gu
Summary: This study investigates the IR response and energy dissipation characteristics of sandstone crushing under different impact velocities. IR experiments were conducted to study the variations in infrared radiation temperature (IRT), infrared thermal imaging, and energy of sandstone crushing. The correlation between IR parameters and mean particle size and fractal dimension of sandstone fragments were determined. The results show that the peak increments of MIRT and AIRT increase with impact velocity, and the time of the maximum infrared radiation peak temperature lags that of average infrared radiation peak temperature. The MIRT, AIRT, and IRE have a good correlation with the mean particle size and fractal dimension of sandstone fragments.
ENGINEERING GEOLOGY
(2023)
Article
Computer Science, Information Systems
Binfang Cao, Jianqi Li, Yincong Liang, Xuan Sun, Weihao Li
Summary: This article proposes an improved circle fitting algorithm for nickel-plated punched steel strips. By using least squares fitting and mean shift algorithm, the circle parameters of the steel strips can be accurately detected, which enhances the robustness and real-time performance of the detection.
Article
Immunology
Jaspreet Toor, Emily R. Adams, Maryam Aliee, Benjamin Amoah, Roy M. Anderson, Diepreye Ayabina, Robin Bailey, Maria-Gloria Basanez, David J. Blok, Seth Blumberg, Anna Borlase, Rocio Caja Rivera, Maria Soledad Castano, Nakul Chitnis, Luc E. Coffeng, Ronald E. Crump, Aatreyee Das, Christopher N. Davis, Emma L. Davis, Michael S. Deiner, Peter J. Diggle, Claudio Fronterre, Federica Giardina, Emanuele Giorgi, Matthew Graham, Jonathan I. D. Hamley, Ching- Huang, Klodeta Kura, Thomas M. Lietman, Tim C. D. Lucas, Veronica Malizia, Graham F. Medley, Aronrag Meeyai, Edwin Michael, Travis C. Porco, Joaquin M. Prada, Kat S. Rock, Epke A. Le Rutte, Morgan E. Smith, Simon E. F. Spencer, Wilma A. Stolk, Panayiota Touloupou, Andreia Vasconcelos, Carolin Vegvari, Sake J. de Vlas, Martin Walker, T. Deirdre Hollingsworth
Summary: The COVID-19 pandemic has led to the postponement of key neglected tropical disease activities, hindering progress towards the ambitious goals for 2030. Mathematical modelling indicates that the impact of this disruption will vary across different NTDs, with a risk of resurgence being fastest in high-transmission areas.
CLINICAL INFECTIOUS DISEASES
(2021)
Article
Public, Environmental & Occupational Health
Sylvie Ntsame Ella, Kisito Ogoussan, Katherine Gass, Lee Hundley, Peter J. Diggle, Olatunji Johnson, Marco Biamonte, Julienne Atsame
Summary: The lack of a WHO-recommended strategy for onchocerciasis treatment in areas co-endemic with loiasis hinders the global elimination of onchocerciasis. A pilot integrated mapping strategy in Gabon, using new loiasis diagnostics and risk prediction tools, demonstrated the possibility of safe mass treatment decisions. This study provided valuable epidemiologic data and insights into the performance of diagnostics and the feasibility of an integrated mapping approach.
AMERICAN JOURNAL OF TROPICAL MEDICINE AND HYGIENE
(2022)
Article
Public, Environmental & Occupational Health
Benjamin Amoah, Claudio Fronterre, Olatunji Johnson, Michael Dejene, Fikre Seife, Nebiyu Negussu, Ana Bakhtiari, Emma M. Harding-Esch, Emanuele Giorgi, Anthony W. Solomon, Peter J. Diggle
Summary: This study utilized geostatistical methods to estimate the prevalence of trachomatous trichiasis in Ethiopia, achieving significantly improved precision compared with traditional methods. Among the 482 evaluation units, 8 units had a probability of 0.9 or higher of meeting the elimination threshold, while 469 units had a probability of 0.1 or lower, with the remaining five units falling within a probability range of 0.45 to 0.65.
INTERNATIONAL JOURNAL OF EPIDEMIOLOGY
(2022)
Article
Biodiversity Conservation
Gerardo Martin, Joseph Erinjery, Rikki Gumbs, Ruchira Somaweera, Dileepa Ediriweera, Peter J. Diggle, Anuradhani Kasturiratne, Hithanadura J. Silva, David G. Lalloo, Takuya Iwamura, Kris A. Murray
Summary: This study demonstrates that snakebite risk can be explained by the abundance, aggressiveness, and envenoming severity of the snake species most frequently involved in envenoming cases. Incorporating ecological information of key snake species is essential for mapping snakebite risk, enabling the customization of preventive measures for dominant snake species and ensuring the deployment of necessary antivenom therapies.
JOURNAL OF APPLIED ECOLOGY
(2022)
Article
Multidisciplinary Sciences
Olatunji Johnson, Claudio Fronterre, Peter J. Diggle, Benjamin Amoah, Emanuele Giorgi
Summary: This paper demonstrates the use of MBGapp for teaching geostatistical analysis to population health scientists, along with an auxiliary app called VariagramApp for teaching Gaussian processes.
Article
Multidisciplinary Sciences
Paul Elliott, Barbara Bodinier, Oliver Eales, Haowei Wang, David Haw, Joshua Elliott, Matthew Whitaker, Jakob Jonnerby, David Tang, Caroline E. Walters, Christina Atchison, Peter J. Diggle, Andrew J. Page, Alexander J. Trotter, Deborah Ashby, Wendy Barclay, Graham Taylor, Helen Ward, Ara Darzi, Graham S. Cooke, Marc Chadeau-Hyam, Christl A. Donnelly
Summary: The unprecedented increase in SARS-CoV-2 infections, particularly due to the Omicron variant, during December 2021 has been observed in England and globally. This study analyzed the prevalence and dynamics of SARS-CoV-2 in England from late November to mid-December 2021 among nearly 100,000 participants in the REACT-1 study. The results showed a high prevalence and rapid growth of infections, particularly in London, with an increasing proportion of Omicron cases. Vaccination and booster campaigns are crucial in controlling the spread of the virus, although additional measures have been necessary to control the rapid growth of the Omicron variant.
Article
Engineering, Environmental
Xavier Emery, Alfredo Alegria
Summary: This paper introduces a parametric family of compactly-supported positive semidefinite kernels for modeling the covariance structure of second-order stationary isotropic random fields in d-dimensional Euclidean space. The kernels have analytic expressions involving hypergeometric functions and real-valued parameters. Various specific and asymptotic cases are included in the kernel family, and the properties and conditions of the kernels are examined for univariate, bivariate, and multivariate cases.
STOCHASTIC ENVIRONMENTAL RESEARCH AND RISK ASSESSMENT
(2022)
Article
Multidisciplinary Sciences
Helen Ward, Matthew Whitaker, Barnaby Flower, Sonja N. Tang, Christina Atchison, Ara Darzi, Christl A. Donnelly, Alexandra Cann, Peter J. Diggle, Deborah Ashby, Steven Riley, Wendy S. Barclay, Paul Elliott, Graham S. Cooke
Summary: Population antibody surveillance is crucial for tracking immune responses to COVID-19 vaccinations. The study found that antibody positivity peaks 4-5 weeks after the first dose of the vaccine and then declines. Age, gender, comorbidities, and infection history affect antibody positivity rates.
NATURE COMMUNICATIONS
(2022)
Article
Microbiology
George Nicholson, Brieuc Lehmann, Tullia Padellini, Koen B. Pouwels, Radka Jersakova, James Lomax, Ruairidh E. King, Ann-Marie Mallon, Peter J. Diggle, Sylvia Richardson, Marta Blangiardo, Chris Holmes
Summary: Global and national surveillance of SARS-CoV-2 epidemiology is based on targeted testing of symptomatic individuals, but these data are often biased. A causal framework described in the study provides debiased estimates by combining targeted test counts and randomized surveillance data.
NATURE MICROBIOLOGY
(2022)
Article
Ecology
Juan M. Escamilla Molgora, Luigi Sedda, Peter Diggle, Peter M. Atkinson
Summary: This study proposes a Bayesian framework for presence-only (PO) species distribution models (SDM) that explicitly models the sampling effect. It provides three modeling alternatives to account for a spatial autocorrelation structure and achieves higher predictive accuracy than MaxEnt in two case studies. The framework is aided by a sampling effort process informed by accumulated observations of independent and heterogeneous surveys.
JOURNAL OF BIOGEOGRAPHY
(2022)
Article
Multidisciplinary Sciences
Paul Elliott, Oliver Eales, Nicholas Steyn, David Tang, Barbara Bodinier, Haowei Wang, Joshua Elliott, Matthew Whitaker, Christina Atchison, Peter J. Diggle, Andrew J. Page, Alexander J. Trotter, Deborah Ashby, Wendy Barclay, Graham Taylor, Helen Ward, Ara Darzi, Graham S. Cooke, Christl A. Donnelly, Marc Chadeau-Hyam
Summary: The rapid transmission of the Omicron variant of SARS-CoV-2 has caused a surge in cases worldwide, including in England. The prevalence of infection is increasing, particularly among older age groups, but hospitalizations and deaths remain lower compared to previous waves, likely due to high levels of vaccination.
Article
Geosciences, Multidisciplinary
Alfredo Alegria
Summary: The effective sample size (ESS) is a measure of independent observations within a sample and has been extensively studied and applied in various statistical fields. This article introduces a space-time ESS, extending the current literature from pure spatial settings to the space-time context. The proposed ESS can be decomposed into spatial and temporal components, allowing statisticians to perform spatial, temporal, or joint space-time data reductions while preserving the simultaneous space-time dependency structure. The results demonstrate the natural translation of elementary attributes from purely spatial ESS to the space-time context and establish connections between the proposed ESS and the non-separability of space and time. Applied to a real wind speed dataset, the proposed ESS reduces the sample size by 80% while maintaining critical statistical information.
SPATIAL STATISTICS
(2023)
Article
Biology
Peter J. Diggle, Claudio Fronterre, Katherine Gass, Lee Hundley, Reza Niles-Robin, Annastacia Sampson, Ana Morice, Ronaldo Carvalho Scholte
Summary: The paper describes an alternative approach to evaluate the elimination of neglected tropical diseases, using geospatial statistical modelling instead of classical survey sampling methods. It suggests using a predictive inferential framework and controlling misclassification rates based on the elimination threshold. The approach also incorporates georeferenced covariates for disease prevalence prediction. The paper concludes with a progress report on an ongoing collaboration in Guyana for the design of an Impact Survey on lymphatic filariasis to be conducted in early 2023.
PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
(2023)
Article
Health Care Sciences & Services
Tullia Padellini, Radka Jersakova, Peter J. Diggle, Chris Holmes, Ruairidh E. King, Brieuc C. L. Lehmann, Ann-Marie Mallon, George Nicholson, Sylvia Richardson, Marta Blangiardo
Summary: Deprivation and proportion of non-White populations are both associated with increased COVID-19 burden, but the impact varies over the course of the pandemic and for different ethnic subgroups. The results suggest that deprivation and ethnicity may affect disease exposure or susceptibility rather than testing access and habits.
LANCET REGIONAL HEALTH-EUROPE
(2022)
Article
Multidisciplinary Sciences
Juan M. Escamilla Molgora, Luigi Sedda, Peter J. Diggle, Peter M. Atkinson
Summary: Species distribution models are widely used for mapping taxa spatially. However, current models typically rely on presence-absence data, while the available data are mainly presence-only. This study presents a Bayesian-based SDM that operates directly on presence-only data and infers absences, improving the utility of global biodiversity databases.
JOURNAL OF THE ROYAL SOCIETY INTERFACE
(2022)