Making Use of 3D Models for Plant Physiognomic Analysis: A Review

Maize and soybean heights estimation from unmanned aerial vehicle (UAV) LiDAR data

(2021) Shezhou Luo et al.   COMPUTERS AND ELECTRONICS IN AGRICULTURE

Multi-temporal estimation of vegetable crop biophysical parameters with varied nitrogen fertilization using terrestrial laser scanning

(2021) Jayakumari Reji et al.   COMPUTERS AND ELECTRONICS IN AGRICULTURE

Non-destructive and cost-effective 3D plant growth monitoring system in outdoor conditions

(2020) Abhipray Paturkar et al.   MULTIMEDIA TOOLS AND APPLICATIONS

Estimating aboveground and organ biomass of plant canopies across the entire season of rice growth with terrestrial laser scanning

(2020) Penglei Li et al.   International Journal of Applied Earth Observation and Geoinformation

Tree extraction and estimation of walnut structure parameters using airborne LiDAR data

(2020) J. Estornell et al.   International Journal of Applied Earth Observation and Geoinformation

Three-Dimensional Monitoring of Plant Structural Parameters and Chlorophyll Distribution

(2019) Kenta Itakura et al.   SENSORS

Measuring crops in 3D: using geometry for plant phenotyping

(2019) Stefan Paulus   Plant Methods

Plant-part segmentation using deep learning and multi-view vision

(2019) Weinan Shi et al.   BIOSYSTEMS ENGINEERING

Detection of wheat height using optimized multi-scan mode of LiDAR during the entire growth stages

(2019) Tai Guo et al.   COMPUTERS AND ELECTRONICS IN AGRICULTURE

SnapNet: 3D point cloud semantic labeling with 2D deep segmentation networks

(2018) Alexandre Boulch et al.   COMPUTERS & GRAPHICS-UK

Mask R-CNN

(2018) Kaiming He et al.   IEEE TRANSACTIONS ON PATTERN ANALYSIS AND MACHINE INTELLIGENCE

Machine Vision System for 3D Plant Phenotyping

(2018) Ayan Chaudhury et al.   IEEE-ACM Transactions on Computational Biology and Bioinformatics

High-speed 3D shape measurement with structured light methods: A review

(2018) Song Zhang   OPTICS AND LASERS IN ENGINEERING

A Novel LiDAR-Based Instrument for High-Throughput, 3D Measurement of Morphological Traits in Maize and Sorghum

(2018) Suresh Thapa et al.   SENSORS

Clustering Field-Based Maize Phenotyping of Plant-Height Growth and Canopy Spectral Dynamics Using a UAV Remote-Sensing Approach

(2018) Liang Han et al.   Frontiers in Plant Science

Fast High Resolution Volume Carving for 3D Plant Shoot Reconstruction

(2017) Hanno Scharr et al.   Frontiers in Plant Science

An image processing and analysis tool for identifying and analysing complex plant root systems in 3D soil using non-destructive analysis: Root1

(2017) Richard J. Flavel et al.   PLoS One

3D tree modeling from incomplete point clouds via optimization and L1-MST

(2016) Jie Mei et al.   INTERNATIONAL JOURNAL OF GEOGRAPHICAL INFORMATION SCIENCE

Segmentation of tree seedling point clouds into elementary units

(2016) Franck Hétroy-Wheeler et al.   INTERNATIONAL JOURNAL OF REMOTE SENSING

Dynamic quantification of canopy structure to characterize early plant vigour in wheat genotypes

(2016) T. Duan et al.   JOURNAL OF EXPERIMENTAL BOTANY

High-throughput estimation of incident light, light interception and radiation-use efficiency of thousands of plants in a phenotyping platform

(2016) Llorenç Cabrera-Bosquet et al.   NEW PHYTOLOGIST

Finely-grained annotated datasets for image-based plant phenotyping

(2016) Massimo Minervini et al.   PATTERN RECOGNITION LETTERS

Terrestrial 3D laser scanning to track the increase in canopy height of both monocot and dicot crop species under field conditions

(2016) Michael Friedli et al.   Plant Methods

3D sorghum reconstructions from depth images identify QTL regulating shoot architecture

(2016) Ryan F. Mccormick et al.   PLANT PHYSIOLOGY

A metrological characterization of the Kinect V2 time-of-flight camera

(2016) Andrea Corti et al.   ROBOTICS AND AUTONOMOUS SYSTEMS

Use of digital images to disclose canopy architecture in olive tree

(2016) M. Moriondo et al.   SCIENTIA HORTICULTURAE

Correction: Vázquez-Arellano, M., et al. 3-D Imaging Systems for Agricultural Applications—A Review. Sensors 2016, 16, 618

(2016) Manuel Vázquez-Arellano et al.   SENSORS

Automated interpretation of 3D laserscanned point clouds for plant organ segmentation

(2015) Mirwaes Wahabzada et al.   BMC BIOINFORMATICS

In-field crop row phenotyping from 3D modeling performed using Structure from Motion

(2015) Sylvain Jay et al.   COMPUTERS AND ELECTRONICS IN AGRICULTURE

Agent-based region growing for individual tree crown delineation from airborne laser scanning (ALS) data

(2015) Zhen Zhen et al.   INTERNATIONAL JOURNAL OF REMOTE SENSING

Validation of plant part measurements using a 3D reconstruction method suitable for high-throughput seedling phenotyping

(2015) Franck Golbach et al.   MACHINE VISION AND APPLICATIONS

Multi-modality imagery database for plant phenotyping

(2015) Jeffrey A. Cruz et al.   MACHINE VISION AND APPLICATIONS

The Impact of different Leaf Surface Tissues on active 3D Laser Triangulation Measurements

(2015) Jan Dupuis et al.   Photogrammetrie Fernerkundung Geoinformation

Direct comparison of MRI and X-ray CT technologies for 3D imaging of root systems in soil: potential and challenges for root trait quantification

(2015) Ralf Metzner et al.   Plant Methods

The leaf angle distribution of natural plant populations: assessing the canopy with a novel software tool

(2015) Mark Müller-Linow et al.   Plant Methods

Structured Light-Based 3D Reconstruction System for Plants

(2015) Thuy Nguyen et al.   SENSORS

In Situ 3D Segmentation of Individual Plant Leaves Using a RGB-D Camera for Agricultural Automation

(2015) Chunlei Xia et al.   SENSORS

Accuracy Analysis of a Multi-View Stereo Approach for Phenotyping of Tomato Plants at the Organ Level

(2015) Johann Rose et al.   SENSORS

3D Maize Plant Reconstruction Based on Georeferenced Overlapping LiDAR Point Clouds

(2015) Miguel Garrido et al.   Remote Sensing

High-precision laser scanning system for capturing 3D plant architecture and analysing growth of cereal plants

(2014) Stefan Paulus et al.   BIOSYSTEMS ENGINEERING

Automatic morphological trait characterization for corn plants via 3D holographic reconstruction

(2014) Supawadee Chaivivatrakul et al.   COMPUTERS AND ELECTRONICS IN AGRICULTURE

Automated Analysis of Barley Organs Using 3D Laser Scanning: An Approach for High Throughput Phenotyping

(2014) Stefan Paulus et al.   SENSORS

A Multi-Resolution Approach for an Automated Fusion of Different Low-Cost 3D Sensors

(2014) Jan Dupuis et al.   SENSORS

PypeTree: A Tool for Reconstructing Tree Perennial Tissues from Point Clouds

(2014) Sylvain Delagrange et al.   SENSORS

Limits of Active Laser Triangulation as an Instrument for High Precision Plant Imaging

(2014) Stefan Paulus et al.   SENSORS

Low-Cost 3D Systems: Suitable Tools for Plant Phenotyping

(2014) Stefan Paulus et al.   SENSORS

Analyzing growing plants from 4D point cloud data

(2013) Yangyan Li et al.   ACM TRANSACTIONS ON GRAPHICS

Surface feature based classification of plant organs from 3D laserscanned point clouds for plant phenotyping

(2013) Stefan Paulus et al.   BMC BIOINFORMATICS

Bayesian Approach to Tree Detection Based on Airborne Laser Scanning Data

(2013) Timo Lahivaara et al.   IEEE TRANSACTIONS ON GEOSCIENCE AND REMOTE SENSING

3D phenotyping and quantitative trait locus mapping identify core regions of the rice genome controlling root architecture

(2013) C. N. Topp et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A novel mesh processing based technique for 3D plant analysis

(2012) Anthony Paproki et al.   BMC PLANT BIOLOGY

On the use of depth camera for 3D phenotyping of entire plants

(2012) Yann Chéné et al.   COMPUTERS AND ELECTRONICS IN AGRICULTURE

Measuring the diurnal pattern of leaf hyponasty and growth in Arabidopsis - a novel phenotyping approach using laser scanning

(2012) Tino Dornbusch et al.   FUNCTIONAL PLANT BIOLOGY

Three-dimensional surface reconstruction of tree canopy from lidar point clouds using a region-based level set method

(2012) Shijun Tang et al.   INTERNATIONAL JOURNAL OF REMOTE SENSING

Single tree detection in heterogeneous boreal forests using airborne laser scanning and area-based stem number estimates

(2012) Liviu Ene et al.   INTERNATIONAL JOURNAL OF REMOTE SENSING

Estimation of vertical plant area density profiles in a rice canopy at different growth stages by high-resolution portable scanning lidar with a lightweight mirror

(2012) Fumiki Hosoi et al.   ISPRS JOURNAL OF PHOTOGRAMMETRY AND REMOTE SENSING

An International Comparison of Individual Tree Detection and Extraction Using Airborne Laser Scanning

(2012) Harri Kaartinen et al.   Remote Sensing

Comparative testing of single-tree detection algorithms under different types of forest

(2011) J. Vauhkonen et al.   FORESTRY

Comparison of six individual tree crown detection algorithms evaluated under varying forest conditions

(2011) Morten Larsen et al.   INTERNATIONAL JOURNAL OF REMOTE SENSING

A review of methods for automatic individual tree-crown detection and delineation from passive remote sensing

(2011) Yinghai Ke et al.   INTERNATIONAL JOURNAL OF REMOTE SENSING

Three-Dimensional Root Phenotyping with a Novel Imaging and Software Platform

(2011) R. T. Clark et al.   PLANT PHYSIOLOGY

RooTrak: Automated Recovery of Three-Dimensional Plant Root Architecture in Soil from X-Ray Microcomputed Tomography Images Using Visual Tracking

(2011) S. Mairhofer et al.   PLANT PHYSIOLOGY

Structured-light 3D surface imaging: a tutorial

(2011) Jason Geng   Advances in Optics and Photonics

Estimating crown base height for Scots pine by means of the 3D geometry of airborne laser scanning data

(2010) Jari Vauhkonen   INTERNATIONAL JOURNAL OF REMOTE SENSING

Comparative Analysis of Clustering-Based Approaches for 3-D Single Tree Detection Using Airborne Fullwave Lidar Data

(2010) Sandeep Gupta et al.   Remote Sensing

Applied machine vision of plants: a review with implications for field deployment in automated farming operations

(2010) C. L. McCarthy et al.   Intelligent Service Robotics

Development of a pit filling algorithm for LiDAR canopy height models

(2009) Joshua R. Ben-Arie et al.   COMPUTERS & GEOSCIENCES

Airborne laser data for stand delineation and information extraction

(2009) B. Koch et al.   INTERNATIONAL JOURNAL OF REMOTE SENSING

3D segmentation of single trees exploiting full waveform LIDAR data

(2009) J. Reitberger et al.   ISPRS JOURNAL OF PHOTOGRAMMETRY AND REMOTE SENSING

The structural and radiative consistency of three-dimensional tree reconstructions from terrestrial lidar

(2009) Jean-François Côté et al.   REMOTE SENSING OF ENVIRONMENT

Use of Terrestrial Laser Scanning Technology for Long Term High Precision Deformation Monitoring

(2009) Rok Vezočnik et al.   SENSORS

A survey on Mesh Segmentation Techniques

(2008) Ariel Shamir   COMPUTER GRAPHICS FORUM

A Lidar Point Cloud Based Procedure for Vertical Canopy Structure Analysis And 3D Single Tree Modelling in Forest

(2008) Yunsheng Wang et al.   SENSORS

CAMPINO — A skeletonization method for point cloud processing

(2007) Alexander Bucksch et al.   ISPRS JOURNAL OF PHOTOGRAMMETRY AND REMOTE SENSING