Fast Genome-Wide QTL Association Mapping on Pedigree and Population Data

Efficient multivariate linear mixed model algorithms for genome-wide association studies

(2014) Xiang Zhou et al.   NATURE METHODS

Comparison of Methods to Account for Relatedness in Genome-Wide Association Studies with Family-Based Data

(2014) Jakris Eu-ahsunthornwattana et al.   PLoS Genetics

Efficient computation with a linear mixed model on large-scale data sets with applications to genetic studies

(2013) Matti Pirinen et al.   Annals of Applied Statistics

Mendel: the Swiss army knife of genetic analysis programs

(2013) Kenneth Lange et al.   BIOINFORMATICS

Next-Generation Statistical Genetics: Modeling, Penalization, and Optimization in High-Dimensional Data

(2013) Kenneth Lange et al.   Annual Review of Statistics and Its Application

Family-Based Association Studies for Next-Generation Sequencing

(2012) Yun Zhu et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Five Years of GWAS Discovery

(2012) Peter M. Visscher et al.   AMERICAN JOURNAL OF HUMAN GENETICS

GLOGS: a fast and powerful method for GWAS of binary traits with risk covariates in related populations

(2012) Stephen A. Stanhope et al.   BIOINFORMATICS

A mixed-model approach for genome-wide association studies of correlated traits in structured populations

(2012) Arthur Korte et al.   NATURE GENETICS

Genome-wide efficient mixed-model analysis for association studies

(2012) Xiang Zhou et al.   NATURE GENETICS

Improved linear mixed models for genome-wide association studies

(2012) Jennifer Listgarten et al.   NATURE METHODS

The variant call format and VCFtools

(2011) P. Danecek et al.   BIOINFORMATICS

Linkage analysis without defined pedigrees

(2011) Aaron G. Day-Williams et al.   GENETIC EPIDEMIOLOGY

A comparison of strategies for analyzing dichotomous outcomes in genome-wide association studies with general pedigrees

(2011) Ming-Huei Chen et al.   GENETIC EPIDEMIOLOGY

FaST linear mixed models for genome-wide association studies

(2011) Christoph Lippert et al.   NATURE METHODS

Family-based designs for genome-wide association studies

(2011) Jurg Ott et al.   NATURE REVIEWS GENETICS

Perspectives on genome-wide multi-stage family-based association studies

(2011) K. Van Steen   STATISTICS IN MEDICINE

ROADTRIPS: Case-Control Association Testing with Partially or Completely Unknown Population and Pedigree Structure

(2010) Timothy Thornton et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Rare Variant Association Analysis Methods for Complex Traits

(2010) Jennifer Asimit et al.   Annual Review of Genetics

Association screening of common and rare genetic variants by penalized regression

(2010) H. Zhou et al.   BIOINFORMATICS

The pursuit of genome-wide association studies: where are we now?

(2010) Chee Seng Ku et al.   JOURNAL OF HUMAN GENETICS

A map of human genome variation from population-scale sequencing

(2010) Richard M. Durbin et al.   NATURE

Mixed linear model approach adapted for genome-wide association studies

(2010) Zhiwu Zhang et al.   NATURE GENETICS

Variance component model to account for sample structure in genome-wide association studies

(2010) Hyun Min Kang et al.   NATURE GENETICS

Genome-wide association analysis by lasso penalized logistic regression

(2009) Tong Tong Wu et al.   BIOINFORMATICS

GWAF: an R package for genome-wide association analyses with family data

(2009) Ming-Huei Chen et al.   BIOINFORMATICS

Potential etiologic and functional implications of genome-wide association loci for human diseases and traits

(2009) L. A. Hindorff et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

On the Analysis of Genome-Wide Association Studies in Family-Based Designs: A Universal, Robust Analysis Approach and an Application to Four Genome-Wide Association Studies

(2009) Sungho Won et al.   PLoS Genetics

A Powerful and Flexible Multilocus Association Test for Quantitative Traits

(2008) Lydia Coulter Kwee et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Coordinate descent algorithms for lasso penalized regression

(2008) Tong Tong Wu et al.   Annals of Applied Statistics

An Improved Method for Quantitative Trait Loci Detection and Identification of Within-Line Segregation in F2 Intercross Designs

(2008) L. Ronnegard et al.   GENETICS

Efficient Control of Population Structure in Model Organism Association Mapping

(2008) H. M. Kang et al.   GENETICS