4.2 Article

Expansion of the neuropeptidome of the globally invasive marine crab Carcinus maenas

Journal

GENERAL AND COMPARATIVE ENDOCRINOLOGY
Volume 235, Issue -, Pages 150-169

Publisher

ACADEMIC PRESS INC ELSEVIER SCIENCE
DOI: 10.1016/j.ygcen.2016.05.013

Keywords

Transcriptomics; Bioinformatics; Neuropeptide; Neurohormone; Crustacea; Decapoda

Funding

  1. National Science Foundation [IOS-1353023]
  2. Cades Foundation of Honolulu, Hawaii
  3. Direct For Biological Sciences
  4. Division Of Integrative Organismal Systems [1353023] Funding Source: National Science Foundation

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Carcinus maenas is widely recognized as one of the world's most successful marine invasive species; its success as an invader is due largely to its ability to thrive under varied environmental conditions. The physiological/behavioral control systems that allow C maenas to adapt to new environments are undoubtedly under hormonal control, the largest single class of hormones being peptides. While numerous studies have focused on identifying native C maenas peptides, none has taken advantage of mining transcriptome shotgun assembly (TSA) sequence data, a strategy proven highly successful for peptide discovery in other crustaceans. Here, a C maenas peptidome was predicted via in silico transcriptome mining. Thirty-seven peptide families were searched for in the extant TSA database, with transcripts encoding precursors for 29 groups identified. The pre/preprohormones deduced from the identified sequences allowed for the prediction of 263 distinct mature peptides, 193 of which are new discoveries for C maenas. The predicted peptides include isoforms of adipokinetic hormone-corazonin-like peptide, allatostatin A, allatostatin B, allatostatin C, bursicon, CCHamide, corazonin, crustacean cardioactive peptide, crustacean hyperglycemic hormone, diuretic hormone 31, diuretic hormone 44, eclosion hormone, FMRFamide-like peptide, HIGSLYRamide, intocin, leucokinin, myosuppressin, neuroparsin, neuropeptide F, orcokinin, pigment dispersing hormone, proctolin, pyrokinin, red pigment concentrating hormone, RYamide, short neuropeptide F, SIFamide, and tachykinin-related peptide. This peptidome is the largest predicted from any single crustacean using the in silico approach, and provides a platform for investigating peptidergic signaling in C maenas, including control of the processes that allow for its success as a global marine invader. (C) 2016 Elsevier Inc. All rights reserved.

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