COVseq is a cost-effective workflow for mass-scale SARS-CoV-2 genomic surveillance
Published 2021 View Full Article
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Title
COVseq is a cost-effective workflow for mass-scale SARS-CoV-2 genomic surveillance
Authors
Keywords
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Journal
Nature Communications
Volume 12, Issue 1, Pages -
Publisher
Springer Science and Business Media LLC
Online
2021-06-23
DOI
10.1038/s41467-021-24078-9
References
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Note: Only part of the references are listed.- Alarming COVID variants show vital role of genomic surveillance
- (2021) David Cyranoski NATURE
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- (2021) Salim S. Abdool Karim et al. NEW ENGLAND JOURNAL OF MEDICINE
- The nf-core framework for community-curated bioinformatics pipelines
- (2020) Philip A. Ewels et al. NATURE BIOTECHNOLOGY
- A Novel Coronavirus from Patients with Pneumonia in China, 2019
- (2020) Na Zhu et al. NEW ENGLAND JOURNAL OF MEDICINE
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- (2020) Divinlal Harilal et al. CLINICAL CHEMISTRY
- Rapid implementation of SARS-CoV-2 sequencing to investigate cases of health-care associated COVID-19: a prospective genomic surveillance study
- (2020) Luke W Meredith et al. LANCET INFECTIOUS DISEASES
- Multiple approaches for massively parallel sequencing of SARS-CoV-2 genomes directly from clinical samples
- (2020) Minfeng Xiao et al. Genome Medicine
- Geographic and Genomic Distribution of SARS-CoV-2 Mutations
- (2020) Daniele Mercatelli et al. Frontiers in Microbiology
- A Comparison of Whole Genome Sequencing of SARS-CoV-2 Using Amplicon-Based Sequencing, Random Hexamers, and Bait Capture
- (2020) Jalees A. Nasir et al. Viruses-Basel
- Whole Genome Sequencing of SARS-CoV-2: Adapting Illumina Protocols for Quick and Accurate Outbreak Investigation during a Pandemic
- (2020) Sureshnee Pillay et al. Genes
- Next generation sequencing of SARS-CoV-2 genomes: challenges, applications and opportunities
- (2020) Matteo Chiara et al. BRIEFINGS IN BIOINFORMATICS
- MINERVA: A Facile Strategy for SARS-CoV-2 Whole-Genome Deep Sequencing of Clinical Samples
- (2020) Chen Chen et al. MOLECULAR CELL
- CUTseq is a versatile method for preparing multiplexed DNA sequencing libraries from low-input samples
- (2019) Xiaolu Zhang et al. Nature Communications
- Nextstrain: real-time tracking of pathogen evolution
- (2018) James Hadfield et al. BIOINFORMATICS
- OUP accepted manuscript
- (2018) BIOINFORMATICS
- Nextflow enables reproducible computational workflows
- (2017) Paolo Di Tommaso et al. NATURE BIOTECHNOLOGY
- Fast gapped-read alignment with Bowtie 2
- (2012) Ben Langmead et al. NATURE METHODS
- The Sequence Alignment/Map format and SAMtools
- (2009) H. Li et al. BIOINFORMATICS
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