Xa7, a Small Orphan Gene Harboring Promoter Trap for AvrXa7, Leads to the Durable Resistance to Xanthomonas oryzae Pv. oryzae

Resistance Genes and their Interactions with Bacterial Blight/Leaf Streak Pathogens (Xanthomonas oryzae) in Rice (Oryza sativa L.)—an Updated Review

(2020) Nan Jiang et al.   Rice

Rice pyramided line IRBB67 (Xa4/Xa7) homeostasis under combined stress of high temperature and bacterial blight

(2020) Gerbert Sylvestre Dossa et al.   Scientific Reports

A Pathovar of Xanthomonas oryzae Infecting Wild Grasses Provides Insight Into the Evolution of Pathogenicity in Rice Agroecosystems

(2019) Jillian M. Lang et al.   Frontiers in Plant Science

Pan-genome analysis highlights the extent of genomic variation in cultivated and wild rice

(2018) Qiang Zhao et al.   NATURE GENETICS

Natural variations in the promoter of OsSWEET13 and OsSWEET14 expand the range of resistance against Xanthomonas oryzae pv. oryzae

(2018) Abha Zaka et al.   PLoS One

Evolutionary analysis of the SUB1 locus across the Oryza genomes

(2017) Railson Schreinert dos Santos et al.   Rice

Wheat Ms2 encodes for an orphan protein that confers male sterility in grass species

(2017) Fei Ni et al.   Nature Communications

Young genes are highly disordered as predicted by the preadaptation hypothesis of de novo gene birth

(2017) Benjamin A. Wilson et al.   Nature Ecology & Evolution

Evolutionary trajectory of phytoalexin biosynthetic gene clusters in rice

(2016) Koji Miyamoto et al.   PLANT JOURNAL

RiTE database: a resource database for genus-wide rice genomics and evolutionary biology

(2015) Dario Copetti et al.   BMC GENOMICS

XA23 Is an Executor R Protein and Confers Broad-Spectrum Disease Resistance in Rice

(2015) Chunlian Wang et al.   Molecular Plant

A Robust CRISPR/Cas9 System for Convenient, High-Efficiency Multiplex Genome Editing in Monocot and Dicot Plants

(2015) Xingliang Ma et al.   Molecular Plant

DSDecode: A Web-Based Tool for Decoding of Sequencing Chromatograms for Genotyping of Targeted Mutations

(2015) Weizhi Liu et al.   Molecular Plant

A knowledge-based molecular screen uncovers a broad-spectrumOsSWEET14resistance allele to bacterial blight from wild rice

(2015) Mathilde Hutin et al.   PLANT JOURNAL

TaFROG encodes a Pooideae orphan protein that interacts with SnRK1 and enhances resistance to the mycotoxigenic fungus Fusarium graminearum

(2015) Alexandre Perochon et al.   PLANT PHYSIOLOGY

QQSorphan gene regulates carbon and nitrogen partitioning across species via NF-YC interactions

(2015) Ling Li et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

CRISPR-P: A Web Tool for Synthetic Single-Guide RNA Design of CRISPR-System in Plants

(2014) Yang Lei et al.   Molecular Plant

The Rice TAL Effector-Dependent Resistance Protein XA10 Triggers Cell Death and Calcium Depletion in the Endoplasmic Reticulum

(2014) D. Tian et al.   PLANT CELL

CGtag: complete genomics toolkit and annotation in a cloud-based Galaxy

(2014) Saskia Hiltemann et al.   GigaScience

The International Oryza Map Alignment Project: development of a genus-wide comparative genomics platform to help solve the 9 billion-people question

(2013) Julie Jacquemin et al.   CURRENT OPINION IN PLANT BIOLOGY

Computational Predictions Provide Insights into the Biology of TAL Effector Target Sites

(2013) Jan Grau et al.   PLoS Computational Biology

TAL Effector-Nucleotide Targeter (TALE-NT) 2.0: tools for TAL effector design and target prediction

(2012) Erin L. Doyle et al.   NUCLEIC ACIDS RESEARCH

RNA-seq pinpoints a Xanthomonas TAL-effector activated resistance gene in a large-crop genome

(2012) T. Strauss et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A paralog of the MtN3/saliva family recessively confers race-specific resistance to Xanthomonas oryzae in rice

(2011) QINSONG LIU et al.   PLANT CELL AND ENVIRONMENT

Rice xa13 Recessive Resistance to Bacterial Blight Is Defeated by Induction of the Disease Susceptibility Gene Os-11N3

(2010) G. Antony et al.   PLANT CELL

A recent duplication revisited: phylogenetic analysis reveals an ancestral duplication highly-conserved throughout the Oryza genus and beyond

(2009) Julie Jacquemin et al.   BMC PLANT BIOLOGY

Identification and molecular mapping of the rice bacterial blight resistance gene allelic to Xa7 from an elite restorer line Zhenhui 084

(2009) Yuchen Zhang et al.   EUROPEAN JOURNAL OF PLANT PATHOLOGY

Comparative inference of illegitimate recombination between rice and sorghum duplicated genes produced by polyploidization

(2009) X. Wang et al.   GENOME RESEARCH

Phylogeny and biogeography of the rice tribe (Oryzeae): Evidence from combined analysis of 20 chloroplast fragments

(2009) Liang Tang et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

A benefit of high temperature: increased effectiveness of a rice bacterial blight disease resistance gene

(2009) K. M. Webb et al.   NEW PHYTOLOGIST

Host and Pathogen Factors Controlling the Rice-Xanthomonas oryzae Interaction

(2009) F. F. White et al.   PLANT PHYSIOLOGY

A Rice Gene of De Novo Origin Negatively Regulates Pathogen-Induced Defense Response

(2009) Wenfei Xiao et al.   PLoS One

Identification and characterization ofBph14, a gene conferring resistance to brown planthopper in rice

(2009) Bo Du et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Breaking the Code of DNA Binding Specificity of TAL-Type III Effectors

(2009) J. Boch et al.   SCIENCE

A Simple Cipher Governs DNA Recognition by TAL Effectors

(2009) M. J. Moscou et al.   SCIENCE

More than just orphans: are taxonomically-restricted genes important in evolution?

(2009) Konstantin Khalturin et al.   TRENDS IN GENETICS

The Evolutionary History of Ehrhartoideae, Oryzeae, and Oryza

(2009) Elizabeth A. Kellogg   Rice

High-resolution mapping and gene prediction of Xanthomonas Oryzae pv. Oryzae resistance gene Xa7

(2008) Shen Chen et al.   MOLECULAR BREEDING

Dynamic Evolution of Oryza Genomes Is Revealed by Comparative Genomic Analysis of a Genus-Wide Vertical Data Set

(2008) J. S.S. Ammiraju et al.   PLANT CELL