Dissolved oxygen concentrations affect the function but not the relative abundance of nitrifying bacterial populations in full-scale municipal wastewater treatment bioreactors during cold weather

Low Temperature and Neutral pH Define Candidatus Nitrotoga sp. as a Competitive Nitrite Oxidizer in Co-Culture with Nitrospira defluvii

(2019) Simone Wegen et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

High Dissolved Oxygen Selection against Nitrospira Sublineage I in Full-Scale Activated Sludge

(2019) Yingyu Law et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Long solids retention times and attached growth phase favor prevalence of comammox bacteria in nitrogen removal systems

(2019) Irmarie Cotto et al.   WATER RESEARCH

Nitrotoga is selected over Nitrospira in newly assembled biofilm communities from a tap water source community at increased nitrite loading

(2017) Marta Kinnunen et al.   ENVIRONMENTAL MICROBIOLOGY

OptiClust, an Improved Method for Assigning Amplicon-Based Sequence Data to Operational Taxonomic Units

(2017) Sarah L. Westcott et al.   mSphere

Relative Abundance of Nitrotoga spp. in a Biofilter of a Cold-Freshwater Aquaculture Plant Appears To Be Stimulated by Slightly Acidic pH

(2016) Jennifer Hüpeden et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Systematic improvement of amplicon marker gene methods for increased accuracy in microbiome studies

(2016) Daryl M Gohl et al.   NATURE BIOTECHNOLOGY

VSEARCH: a versatile open source tool for metagenomics

(2016) Torbjørn Rognes et al.   PeerJ

Complete nitrification by a single microorganism

(2015) Maartje A. H. J. van Kessel et al.   NATURE

Complete nitrification by Nitrospira bacteria

(2015) Holger Daims et al.   NATURE

MiDAS: the field guide to the microbes of activated sludge

(2015) Simon Jon McIlroy et al.   Database-The Journal of Biological Databases and Curation

Nitrotoga-like bacteria are previously unrecognized key nitrite oxidizers in full-scale wastewater treatment plants

(2014) Sebastian Lücker et al.   ISME Journal

Development of a Dual-Index Sequencing Strategy and Curation Pipeline for Analyzing Amplicon Sequence Data on the MiSeq Illumina Sequencing Platform

(2013) James J. Kozich et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Abundance and diversity based on amoA genes of ammonia-oxidizing archaea and bacteria in ten wastewater treatment systems

(2013) Jingfeng Gao et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Unravelling the reasons for disproportion in the ratio of AOB and NOB in aerobic granular sludge

(2012) Mari K. H. Winkler et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

Ammonia-oxidizing archaea and ammonia-oxidizing bacteria in six full-scale wastewater treatment bioreactors

(2011) Tong Zhang et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Characterization of a microbial community capable of nitrification at cold temperature

(2009) Thomas F. Ducey et al.   BIORESOURCE TECHNOLOGY

Advantages of psychrophiles in improving bio-treatment efficiency of small size constructed wetlands during cold weather

(2009) G. Ying et al.   Environmental Progress & Sustainable Energy

Temperature influences the population structure of nitrite-oxidizing bacteria in activated sludge

(2009) M. Alawi et al.   Environmental Microbiology Reports