Intragenic heterochromatin‐mediated alternative polyadenylation modulates miRNA and pollen development in rice

Genome‐wide distribution and functions of the AAE complex in epigenetic regulation in Arabidopsis

(2021) Yi‐Zhe Zhang et al.   Journal of Integrative Plant Biology

Regulation of Rice Tillering by RNA-Directed DNA Methylation at Miniature Inverted-Repeat Transposable Elements

(2020) Le Xu et al.   Molecular Plant

Integrative analysis of reference epigenomes in 20 rice varieties

(2020) Lun Zhao et al.   Nature Communications

Transcriptional regulation of genes bearing intronic heterochromatin in the rice genome

(2020) Nino A. Espinas et al.   PLoS Genetics

AtXRN4 Affects the Turnover of Chosen miRNA*s in Arabidopsis

(2020) Yan Liu et al.   Plants-Basel

Jasmonate Signaling Enhances RNA Silencing and Antiviral Defense in Rice

(2020) Zhirui Yang et al.   Cell Host & Microbe

HDA6 dependent chromatin deacetylation orchestrates mRNA polyadenylation

(2020) Juncheng Lin et al.   GENOME RESEARCH

The Crosstalk Between Epigenetic Mechanisms and Alternative RNA Processing Regulation

(2020) Jian Zhang et al.   Frontiers in Genetics

Coupling of H3K27me3 recognition with transcriptional repression through the BAH-PHD-CPL2 complex in Arabidopsis

(2020) Yi-Zhe Zhang et al.   Nature Communications

OsmiR528 enhances cold stress tolerance by repressing expression of stress response-related transcription factor genes in plant cells

(2019) Wei Tang et al.   CURRENT GENOMICS

Fine-Tuning of MiR528 Accumulation Modulates Flowering Time in Rice

(2019) Rongxin Yang et al.   Molecular Plant

Transcriptional Regulation of miR528 by OsSPL9 Orchestrates Antiviral Response in Rice

(2019) Shengze Yao et al.   Molecular Plant

Micro RNA 528, a hub regulator modulating ROS homeostasis via targeting of a diverse set of genes encoding copper‐containing proteins in monocots

(2019) Hong Zhu et al.   NEW PHYTOLOGIST

Transcriptome Analyses of FY Mutants Reveal Its Role in mRNA Alternative Polyadenylation

(2019) Zhibo Yu et al.   PLANT CELL

A Brassica miRNA Regulates Plant Growth and Immunity through Distinct Modes of Action

(2019) Chen Cui et al.   Molecular Plant

FIERY1 promotes microRNA accumulation by suppressing rRNA-derived small interfering RNAs in Arabidopsis

(2019) Chenjiang You et al.   Nature Communications

Epigenetic regulation in plant abiotic stress responses

(2019) Ya‐Nan Chang et al.   Journal of Integrative Plant Biology

OsmiR528 regulates rice-pollen intine formation by targeting an uclacyanin to influence flavonoid metabolism

(2019) Yu-Chan Zhang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Dynamics and function of DNA methylation in plants

(2018) Huiming Zhang et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

Defective XRN3-mediated transcription termination in Arabidopsis affects the expression of protein-coding genes

(2018) Michal Krzyszton et al.   PLANT JOURNAL

Four putative SWI2/SNF2 chromatin remodelers have dual roles in regulating DNA methylation in Arabidopsis

(2018) Dong-Lei Yang et al.   Cell Discovery

Retrospective and perspective of plant epigenetics in China

(2018) Cheng-Guo Duan et al.   Journal of Genetics and Genomics

The Arabidopsis RRM domain protein EDM3 mediates race-specific disease resistance by controlling H3K9me2-dependent alternative polyadenylation of RPP7 immune receptor transcripts

(2018) Yan Lai et al.   PLANT JOURNAL

MiR408 Regulates Grain Yield and Photosynthesis via a Phytocyanin Protein

(2017) Jin-Ping Zhang et al.   PLANT PHYSIOLOGY

A protein complex regulates RNA processing of intronic heterochromatin-containing genes inArabidopsis

(2017) Cheng-Guo Duan et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A pair of transposon-derived proteins function in a histone acetyltransferase complex for active DNA demethylation

(2016) Cheng-Guo Duan et al.   CELL RESEARCH

Activity and roles of Arabidopsis thaliana XRN family exoribonucleases in noncoding RNA pathways

(2016) Yukio Kurihara   JOURNAL OF PLANT RESEARCH

Molecular and genetic control of plant thermomorphogenesis

(2016) Marcel Quint et al.   Nature Plants

The karma of oil palms

(2015) Jerzy Paszkowski   NATURE

Loss of Karma transposon methylation underlies the mantled somaclonal variant of oil palm

(2015) Meilina Ong-Abdullah et al.   NATURE

Epigenetic regulation of intragenic transposable elements impacts gene transcription in Arabidopsis thaliana

(2015) Tu N. Le et al.   NUCLEIC ACIDS RESEARCH

DNA Methylation within Transcribed Regions

(2015) Taiko K. To et al.   PLANT PHYSIOLOGY

SHOOT GROWTH1 Maintains Arabidopsis Epigenomes by Regulating IBM1

(2014) Vincent Coustham et al.   PLoS One

Genomic Distribution of H3K9me2 and DNA Methylation in a Maize Genome

(2014) Patrick T. West et al.   PLoS One

Progress Toward Understanding Heterosis in Crop Plants

(2013) Patrick S. Schnable et al.   Annual Review of Plant Biology

RNA-binding protein regulates plant DNA methylation by controlling mRNA processing at the intronic heterochromatin-containing gene IBM1

(2013) X. Wang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Arabidopsis EDM2 promotes IBM1 distal polyadenylation and regulates genome DNA methylation patterns

(2013) M. Lei et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

An alternative polyadenylation mechanism coopted to the Arabidopsis RPP7 gene through intronic retrotransposon domestication

(2013) T. Tsuchiya et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Mechanism for full-length RNA processing of Arabidopsis genes containing intragenic heterochromatin

(2013) Hidetoshi Saze et al.   Nature Communications

Suppression of Arabidopsis ARGONAUTE1-Mediated Slicing, Transgene-Induced RNA Silencing, and DNA Methylation by Distinct Domains of the Cucumber mosaic virus 2b Protein

(2012) C.-G. Duan et al.   PLANT CELL

Surveillance of 3′ Noncoding Transcripts Requires FIERY1 and XRN3 in Arabidopsis

(2012) Yukio Kurihara et al.   G3-Genes Genomes Genetics

Target-Mediated Protection of Endogenous MicroRNAs in C. elegans

(2011) Saibal Chatterjee et al.   DEVELOPMENTAL CELL

Histone Methylation in Higher Plants

(2010) Chunyan Liu et al.   Annual Review of Plant Biology

Analysis of the Rac/Rop Small GTPase Family in Rice: Expression, Subcellular Localization and Role in Disease Resistance

(2010) L. Chen et al.   PLANT AND CELL PHYSIOLOGY

Small RNAs and Their Roles in Plant Development

(2009) Xuemei Chen   Annual Review of Cell and Developmental Biology

Hd3a and RFT1 are essential for flowering in rice

(2008) R. Komiya et al.   DEVELOPMENT