Chronic, cortex-wide imaging of specific cell populations during behavior

Spatiotemporal refinement of signal flow through association cortex during learning

(2020) Ariel Gilad et al.   Nature Communications

Glioma-Induced Alterations in Neuronal Activity and Neurovascular Coupling during Disease Progression

(2020) Mary Katherine Montgomery et al.   Cell Reports

Localized semi-nonnegative matrix factorization (LocaNMF) of widefield calcium imaging data

(2020) Shreya Saxena et al.   PLoS Computational Biology

Automated task training and longitudinal monitoring of mouse mesoscale cortical circuits using home cages

(2020) Timothy H Murphy et al.   eLife

Locomotion-dependent remapping of distributed cortical networks

(2019) Kelly B. Clancy et al.   NATURE NEUROSCIENCE

Spontaneous behaviors drive multidimensional, brainwide activity

(2019) Carsen Stringer et al.   SCIENCE

Cortex-wide neural interfacing via transparent polymer skulls

(2019) Leila Ghanbari et al.   Nature Communications

Single-trial neural dynamics are dominated by richly varied movements

(2019) Simon Musall et al.   NATURE NEUROSCIENCE

Task-Dependent Changes in the Large-Scale Dynamics and Necessity of Cortical Regions

(2019) Lucas Pinto et al.   NEURON

Movement and Performance Explain Widespread Cortical Activity in a Visual Detection Task

(2019) David B Salkoff et al.   CEREBRAL CORTEX

Separation of hemodynamic signals from GCaMP fluorescence measured with widefield imaging

(2019) Matthew Taylor Valley et al.   JOURNAL OF NEUROPHYSIOLOGY

Distributed coding of choice, action and engagement across the mouse brain

(2019) Nicholas A. Steinmetz et al.   NATURE

In vivo widefield calcium imaging of the mouse cortex for analysis of network connectivity in health and brain disease

(2019) Julia V. Cramer et al.   NEUROIMAGE

Functional ultrasound neuroimaging: a review of the preclinical and clinical state of the art

(2018) Thomas Deffieux et al.   CURRENT OPINION IN NEUROBIOLOGY

Behavioral Strategy Determines Frontal or Posterior Location of Short-Term Memory in Neocortex

(2018) Ariel Gilad et al.   NEURON

Effects of Arousal on Mouse Sensory Cortex Depend on Modality

(2018) Daisuke Shimaoka et al.   Cell Reports

Mesoscale Mapping of Mouse Cortex Reveals Frequency-Dependent Cycling between Distinct Macroscale Functional Modules

(2017) Matthieu P. Vanni et al.   JOURNAL OF NEUROSCIENCE

Global Representations of Goal-Directed Behavior in Distinct Cell Types of Mouse Neocortex

(2017) William E. Allen et al.   NEURON

Mapping cortical mesoscopic networks of single spiking cortical or sub-cortical neurons

(2017) Dongsheng Xiao et al.   eLife

Large-scale imaging of cortical dynamics during sensory perception and behavior

(2016) Joseph B. Wekselblatt et al.   JOURNAL OF NEUROPHYSIOLOGY

Intact skull chronic windows for mesoscopic wide-field imaging in awake mice

(2016) Gergely Silasi et al.   JOURNAL OF NEUROSCIENCE METHODS

Automated identification of mouse visual areas with intrinsic signal imaging

(2016) Ashley L Juavinett et al.   Nature Protocols

Wide-field optical mapping of neural activity and brain haemodynamics: considerations and novel approaches

(2016) Ying Ma et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Long-Term Optical Access to an Estimated One Million Neurons in the Live Mouse Cortex

(2016) Tony Hyun Kim et al.   Cell Reports

Sensitive red protein calcium indicators for imaging neural activity

(2016) Hod Dana et al.   eLife

Intact-Brain Analyses Reveal Distinct Information Carried by SNc Dopamine Subcircuits

(2015) Talia N. Lerner et al.   CELL

Deviant Processing in the Primary Somatosensory Cortex

(2015) Simon Musall et al.   CEREBRAL CORTEX

Three Types of Cortical Layer 5 Neurons That Differ in Brain-wide Connectivity and Function

(2015) Euiseok J. Kim et al.   NEURON

Topography and Areal Organization of Mouse Visual Cortex

(2014) M. E. Garrett et al.   JOURNAL OF NEUROSCIENCE

Mesoscale Transcranial Spontaneous Activity Mapping in GCaMP3 Transgenic Mice Reveals Extensive Reciprocal Connections between Areas of Somatomotor Cortex

(2014) M. P. Vanni et al.   JOURNAL OF NEUROSCIENCE

A mesoscale connectome of the mouse brain

(2014) Seung Wook Oh et al.   NATURE

Dimensionality reduction for large-scale neural recordings

(2014) John P Cunningham et al.   NATURE NEUROSCIENCE

Ultrasensitive fluorescent proteins for imaging neuronal activity

(2013) Tsai-Wen Chen et al.   NATURE

Flow of Cortical Activity Underlying a Tactile Decision in Mice

(2013) Zengcai V. Guo et al.   NEURON

Functional Specialization of Mouse Higher Visual Cortical Areas

(2011) Mark L. Andermann et al.   NEURON

Imaging brain electric signals with genetically targeted voltage-sensitive fluorescent proteins

(2010) Walther Akemann et al.   NATURE METHODS