Fungal enzymes for the degradation of polyethylene: Molecular docking simulation and biodegradation pathway proposal

Synthesis, Molecular Docking Simulation, and Enzymatic Degradation of AB-Type Indole-Based Polyesters with Improved Thermal Properties

(2020) Ping Wang et al.   BIOMACROMOLECULES

Correlation between initial biodegradability determined by docking studies and structure of alkylbenzene sulfonates: A new tool for intelligent design of environmentally friendly anionic surfactants

(2020) María Antonela Zígolo et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Interaction mechanism of plant-based nanoarchitectured materials with digestive enzymes of termites as target for pest control: Evidence from molecular docking simulation and in vitro studies

(2020) Sandhya Mishra et al.   JOURNAL OF HAZARDOUS MATERIALS

Application of docking and active site analysis for enzyme linked biodegradation of textile dyes

(2019) Shantkriti Srinivasan et al.   ENVIRONMENTAL POLLUTION

Effects of polyethylene microplastics on the gut microbial community, reproduction and avoidance behaviors of the soil springtail, Folsomia candida

(2019) Hui Ju et al.   ENVIRONMENTAL POLLUTION

Polyurethanases: Three-dimensional structures and molecular dynamics simulations of enzymes that degrade polyurethane

(2019) Vanessa Petry do Canto et al.   JOURNAL OF MOLECULAR GRAPHICS & MODELLING

Fungal potential for the degradation of petroleum-based polymers: An overview of macro- and microplastics biodegradation

(2019) Carmen Sánchez   BIOTECHNOLOGY ADVANCES

Towards an ecology of soil microplastics

(2019) Maxwell S. Helmberger et al.   FUNCTIONAL ECOLOGY

Biodegradation of polyethylene microplastic particles by the fungus Aspergillus flavus from the guts of wax moth Galleria mellonella

(2019) Junqing Zhang et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Exploring the impacts of plastics in soil – The effects of polyester textile fibers on soil invertebrates

(2019) Salla Selonen et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Active Site Flexibility as a Hallmark for Efficient PET Degradation by I. sakaiensis PETase

(2018) Tobias Fecker et al.   BIOPHYSICAL JOURNAL

Application of molecular docking for the degradation of organic pollutants in the environmental remediation: A review

(2018) Zhifeng Liu et al.   CHEMOSPHERE

Microplastics as an emerging threat to terrestrial ecosystems

(2018) Anderson Abel de Souza Machado et al.   GLOBAL CHANGE BIOLOGY

CASTp 3.0: computed atlas of surface topography of proteins

(2018) Wei Tian et al.   NUCLEIC ACIDS RESEARCH

Biodegradability of polyethylene by bacteria and fungi from Dandora dumpsite Nairobi-Kenya

(2018) Christabel Ndahebwa Muhonja et al.   PLoS One

Fungal Cytochrome P450s and the P450 Complement (CYPome) of Fusarium graminearum

(2018) Jiyoung Shin et al.   Toxins

Effects of rhamnolipids on the removal of 2,4,2,4-tetrabrominated biphenyl ether (BDE-47) by Phanerochaete chrysosporium analyzed with a combined approach of experiments and molecular docking

(2018) Zhifeng Liu et al.   CHEMOSPHERE

Marine debris, plastics, microplastics and nano-plastics: What next?

(2018) P. Agamuthu   WASTE MANAGEMENT & RESEARCH

Effect of chemical treatment on biological degradation of high-density polyethylene (HDPE)

(2018) Ashutosh Kr Chaudhary et al.   ENVIRONMENT DEVELOPMENT AND SUSTAINABILITY

Immobilization of laccase on hollow mesoporous carbon nanospheres: Noteworthy immobilization, excellent stability and efficacious for antibiotic contaminants removal

(2018) Binbin Shao et al.   JOURNAL OF HAZARDOUS MATERIALS

In silico Prediction, Characterization, Molecular Docking, and Dynamic Studies on Fungal SDRs as Novel Targets for Searching Potential Fungicides Against Fusarium Wilt in Tomato

(2018) Mohd Aamir et al.   Frontiers in Pharmacology

Biodegradation of phthalic acid esters (PAEs) and in silico structural characterization of mono-2-ethylhexyl phthalate (MEHP) hydrolase on the basis of close structural homolog

(2017) Neha Singh et al.   JOURNAL OF HAZARDOUS MATERIALS

Biodegradation of polyethylene microplastics by the marine fungus Zalerion maritimum

(2017) Ana Paço et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Evaluation of HDPE and LDPE degradation by fungus, implemented by statistical optimization

(2017) Nupur Ojha et al.   Scientific Reports

Fungal Unspecific Peroxygenases Oxidize the Majority of Organic EPA Priority Pollutants

(2017) Alexander Karich et al.   Frontiers in Microbiology

Biodegradation of thermally treated low density polyethylene by fungus Rhizopus oryzae NS 5

(2017) Shraddha Awasthi et al.   3 Biotech

Biodegradation of thermally treated low density polyethylene by fungus Rhizopus oryzae NS 5

(2017) Shraddha Awasthi et al.   3 Biotech

Molecular docking studies of 3-bromopyruvate and its derivatives to metabolic regulatory enzymes: Implication in designing of novel anticancer therapeutic strategies

(2017) Saveg Yadav et al.   PLoS One

Synthesis of bio-based epoxy monomers from natural allyl- and vinyl phenols and the estimation of their affinity to the estrogen receptor α by molecular docking

(2016) Erika Zago et al.   NEW JOURNAL OF CHEMISTRY

Degradation of polyethylene by Trichoderma harzianum—SEM, FTIR, and NMR analyses

(2014) H. V. Sowmya et al.   ENVIRONMENTAL MONITORING AND ASSESSMENT

Enhancement of in vitro high-density polyethylene (HDPE) degradation by physical, chemical, and biological treatments

(2014) V. Balasubramanian et al.   ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH

Microbial degradation and deterioration of polyethylene – A review

(2014) Juan-Manuel Restrepo-Flórez et al.   INTERNATIONAL BIODETERIORATION & BIODEGRADATION

Structural Basis of Substrate Conversion in a New Aromatic Peroxygenase

(2013) Klaus Piontek et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

In silico bioremediation of polycyclic aromatic hydrocarbon: A frontier in environmental chemistry

(2013) Vito Librando et al.   JOURNAL OF MOLECULAR GRAPHICS & MODELLING

A comparative DFT study on the differences between normal modes of polyethylene and polyethylene glycol via B3LYP Hamiltonian and the Hartree–Fock method in multiple bases

(2013) E. Talebian et al.   OPTIK

Biodegradation of Low-Density Polyethylene (LDPE) by Mixed Culture of Lysinibacillus xylanilyticus and Aspergillus niger in Soil

(2013) Atefeh Esmaeili et al.   PLoS One

On the binding affinity of macromolecular interactions: daring to ask why proteins interact

(2012) P. L. Kastritis et al.   Journal of the Royal Society Interface

Crystallographic, Kinetic, and Spectroscopic Study of the First Ligninolytic Peroxidase Presenting a Catalytic Tyrosine

(2011) Yuta Miki et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Combining Global and Local Measures for Structure-Based Druggability Predictions

(2011) Andrea Volkamer et al.   Journal of Chemical Information and Modeling

The interaction between 4-aminoantipyrine and bovine serum albumin: Multiple spectroscopic and molecular docking investigations

(2011) Yue Teng et al.   JOURNAL OF HAZARDOUS MATERIALS

Analyzing the Topology of Active Sites: On the Prediction of Pockets and Subpockets

(2010) Andrea Volkamer et al.   Journal of Chemical Information and Modeling

Ultrahigh (0.93Å) resolution structure of manganese peroxidase from Phanerochaete chrysosporium: Implications for the catalytic mechanism

(2010) Munirathinam Sundaramoorthy et al.   JOURNAL OF INORGANIC BIOCHEMISTRY

AutoDock4 and AutoDockTools4: Automated docking with selective receptor flexibility

(2009) Garrett M. Morris et al.   JOURNAL OF COMPUTATIONAL CHEMISTRY

Biodegradation of low-density polyethylene (LDPE) by isolated fungi in solid waste medium

(2009) Sahebnazar Zahra et al.   WASTE MANAGEMENT