Development of a generalizable natural language processing pipeline to extract physician-reported pain from clinical reports: Generated using publicly-available datasets and tested on institutional clinical reports for cancer patients with bone metastases

Comparison of Natural Language Processing Rules-based and Machine-learning Systems to Identify Lumbar Spine Imaging Findings Related to Low Back Pain

(2018) W. Katherine Tan et al.   ACADEMIC RADIOLOGY

Natural Language Processing for EHR-Based Computational Phenotyping

(2018) Zexian Zeng et al.   IEEE-ACM Transactions on Computational Biology and Bioinformatics

An Integrated Quantitative Index for Measuring Chronic Multisite Pain: The Multiple Areas of Pain (MAP) Study

(2018) Mark S Wallace et al.   PAIN MEDICINE

MetaMap: an atlas of metatranscriptomic reads in human disease-related RNA-seq data

(2018) L M Simon et al.   GigaScience

Comparison of MetaMap and cTAKES for entity extraction in clinical notes

(2018) Ruth Reátegui et al.   BMC Medical Informatics and Decision Making

Multisite Pain Is Associated with Long-term Patient-Reported Outcomes in Older Adults with Persistent Back Pain

(2018) Sean D Rundell et al.   PAIN MEDICINE

Prescription extraction using CRFs and word embeddings

(2017) Carson Tao et al.   JOURNAL OF BIOMEDICAL INFORMATICS

MetaMap Lite: an evaluation of a new Java implementation of MetaMap

(2017) Dina Demner-Fushman et al.   JOURNAL OF THE AMERICAN MEDICAL INFORMATICS ASSOCIATION

Classifying clinical notes with pain assessment using machine learning

(2017) Samah Jamal Fodeh et al.   MEDICAL & BIOLOGICAL ENGINEERING & COMPUTING

MIMIC-III, a freely accessible critical care database

(2016) Alistair E.W. Johnson et al.   Scientific Data

Assessment of Pain Intensity in Clinical Trials: Individual Ratings vs Composite Scores

(2015) Mark P. Jensen et al.   PAIN MEDICINE

An overview of MetaMap: historical perspective and recent advances

(2014) Alan R Aronson et al.   JOURNAL OF THE AMERICAN MEDICAL INFORMATICS ASSOCIATION

Learning regular expressions for clinical text classification

(2014) D. D. A. Bui et al.   JOURNAL OF THE AMERICAN MEDICAL INFORMATICS ASSOCIATION

Negation’s Not Solved: Generalizability Versus Optimizability in Clinical Natural Language Processing

(2014) Stephen Wu et al.   PLoS One

Using electronic health records data to identify patients with chronic pain in a primary care setting

(2013) Terrence Y Tian et al.   JOURNAL OF THE AMERICAN MEDICAL INFORMATICS ASSOCIATION

Longitudinal analysis of pain in patients with metastatic prostate cancer using natural language processing of medical record text

(2012) Norris H Heintzelman et al.   JOURNAL OF THE AMERICAN MEDICAL INFORMATICS ASSOCIATION

Realizing the full potential of electronic health records: the role of natural language processing

(2011) Lucila Ohno-Machado   JOURNAL OF THE AMERICAN MEDICAL INFORMATICS ASSOCIATION

Medical i2b2 NLP Smoking Challenge: The A-Life System Architecture and Methodology

(2007) D. T. Heinze et al.   JOURNAL OF THE AMERICAN MEDICAL INFORMATICS ASSOCIATION